RNA–Protein interactions for RNA: ENST00000541025.2

TTR-203, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 956 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-203ENST00000541025 TRIML1Q8N9V2 468 aa6.68□□□□□ -1.34
TTR-203ENST00000541025 B3GALNT2Q8NCR0 500 aa6.68□□□□□ -1.34
TTR-203ENST00000541025 OR6B3Q8NGW1 331 aa6.68□□□□□ -1.34
TTR-203ENST00000541025 SPATA18Q8TC71 538 aa6.68□□□□□ -1.34
TTR-203ENST00000541025 FGF14Q92915 247 aa6.68□□□□□ -1.34
TTR-203ENST00000541025 PSMG2Q969U7 264 aa6.68□□□□□ -1.34
TTR-203ENST00000541025 SLC35C1Q96A29 364 aa6.68□□□□□ -1.34
TTR-203ENST00000541025 MCRS1Q96EZ8 462 aa6.68□□□□□ -1.34
TTR-203ENST00000541025 PCED1BQ96HM7 432 aa6.68□□□□□ -1.34
TTR-203ENST00000541025 TWNKQ96RR1 684 aa6.68□□□□□ -1.34
TTR-203ENST00000541025 MLST8Q9BVC4 326 aa6.68□□□□□ -1.34
TTR-203ENST00000541025 GTPBP4Q9BZE4 634 aaKnown RBP6.68□□□□□ -1.34
TTR-203ENST00000541025 NUP62CLQ9H1M0 184 aa6.68□□□□□ -1.34
TTR-203ENST00000541025 SNX25Q9H3E2 840 aa6.68□□□□□ -1.34
TTR-203ENST00000541025 TMEM8AQ9HCN3 771 aa6.68□□□□□ -1.34
TTR-203ENST00000541025 C14orf119Q9NWQ9 140 aa6.68□□□□□ -1.34
TTR-203ENST00000541025 HSFX1Q9UBD0 423 aa6.68□□□□□ -1.34
TTR-203ENST00000541025 CDH9Q9ULB4 789 aa6.68□□□□□ -1.34
TTR-203ENST00000541025 MYOFQ9NZM1 2061 aa6.68□□□□□ -1.34
TTR-203ENST00000541025 ZNF318Q5VUA4 2279 aa6.67□□□□□ -1.34
TTR-203ENST00000541025 E2F8A0AVK6 867 aa6.67□□□□□ -1.34
TTR-203ENST00000541025 GAGE12BA1L429 117 aa6.67□□□□□ -1.34
TTR-203ENST00000541025 GAGE12HA6NDE8 117 aa6.67□□□□□ -1.34
TTR-203ENST00000541025 A8MXQ7 604 aa6.67□□□□□ -1.34
TTR-203ENST00000541025 DIRC3C9JPN6 131 aa6.67□□□□□ -1.34
TTR-203ENST00000541025 PDGFBP01127 241 aaPredicted RBP6.67□□□□□ -1.34
TTR-203ENST00000541025 ALADP13716 330 aa6.67□□□□□ -1.34
TTR-203ENST00000541025 HMGA1P17096 107 aaKnown RBP6.67□□□□□ -1.34
TTR-203ENST00000541025 BDNFP23560 247 aa6.67□□□□□ -1.34
TTR-203ENST00000541025 FCARP24071 287 aa6.67□□□□□ -1.34
TTR-203ENST00000541025 PCSK1P29120 753 aa6.67□□□□□ -1.34
TTR-203ENST00000541025 GTF2H1P32780 548 aa6.67□□□□□ -1.34
TTR-203ENST00000541025 PPP1R2P41236 205 aa6.67□□□□□ -1.34
TTR-203ENST00000541025 ALDH1A3P47895 512 aa6.67□□□□□ -1.34
TTR-203ENST00000541025 TUFMP49411 452 aaKnown RBP6.67□□□□□ -1.34
TTR-203ENST00000541025 NDST1P52848 882 aa6.67□□□□□ -1.34
TTR-203ENST00000541025 COL10A1Q03692 680 aa6.67□□□□□ -1.34
TTR-203ENST00000541025 PLD1Q13393 1074 aa6.67□□□□□ -1.34
TTR-203ENST00000541025 TEAD2Q15562 447 aa6.67□□□□□ -1.34
TTR-203ENST00000541025 NFE2Q16621 373 aaPredicted RBP6.67□□□□□ -1.34
TTR-203ENST00000541025 CFAP221Q4G0U5 840 aa6.67□□□□□ -1.34
TTR-203ENST00000541025 KRT39Q6A163 491 aa6.67□□□□□ -1.34
TTR-203ENST00000541025 FOXR2Q6PJQ5 311 aa6.67□□□□□ -1.34
TTR-203ENST00000541025 RBM43Q6ZSC3 357 aaKnown RBP6.67□□□□□ -1.34
TTR-203ENST00000541025 PAQR9Q6ZVX9 377 aa6.67□□□□□ -1.34
TTR-203ENST00000541025 PDZD4Q76G19 769 aaPredicted RBP6.67□□□□□ -1.34
TTR-203ENST00000541025 TMEM150AQ86TG1 271 aa6.67□□□□□ -1.34
TTR-203ENST00000541025 ACOT1Q86TX2 421 aa6.67□□□□□ -1.34
TTR-203ENST00000541025 SPATA2LQ8IUW3 424 aaPredicted RBP6.67□□□□□ -1.34
TTR-203ENST00000541025 VRK3Q8IV63 474 aa6.67□□□□□ -1.34
TTR-203ENST00000541025 SLC44A3Q8N4M1 653 aa6.67□□□□□ -1.34
TTR-203ENST00000541025 MYCBPAPQ8TBZ2 947 aa6.67□□□□□ -1.34
TTR-203ENST00000541025 C2orf15Q8WU43 125 aaKnown RBP6.67□□□□□ -1.34
TTR-203ENST00000541025 SNX33Q8WV41 574 aa6.67□□□□□ -1.34
TTR-203ENST00000541025 AHCYL2Q96HN2 611 aaKnown RBP6.67□□□□□ -1.34
TTR-203ENST00000541025 KXD1Q9BQD3 176 aa6.67□□□□□ -1.34
TTR-203ENST00000541025 LRFN3Q9BTN0 628 aa6.67□□□□□ -1.34
TTR-203ENST00000541025 B3GNT5Q9BYG0 378 aa6.67□□□□□ -1.34
TTR-203ENST00000541025 PLA2G2FQ9BZM2 168 aa6.67□□□□□ -1.34
TTR-203ENST00000541025 ZNF518BQ9C0D4 1074 aa6.67□□□□□ -1.34
TTR-203ENST00000541025 ASAH2Q9NR71 780 aa6.67□□□□□ -1.34
TTR-203ENST00000541025 RAB20Q9NX57 234 aa6.67□□□□□ -1.34
TTR-203ENST00000541025 ARMCX3Q9UH62 379 aaPredicted RBP6.67□□□□□ -1.34
TTR-203ENST00000541025 COQ4Q9Y3A0 265 aa6.67□□□□□ -1.34
TTR-203ENST00000541025 BICDL2A1A5D9 508 aa6.66□□□□□ -1.34
TTR-203ENST00000541025 TMEM200CA6NKL6 621 aa6.66□□□□□ -1.34
TTR-203ENST00000541025 SLC38A8A6NNN8 435 aa6.66□□□□□ -1.34
TTR-203ENST00000541025 RNASET2O00584 256 aaKnown RBP6.66□□□□□ -1.34
TTR-203ENST00000541025 BEST1O76090 585 aa6.66□□□□□ -1.34
TTR-203ENST00000541025 NOL4O94818 638 aa6.66□□□□□ -1.34
TTR-203ENST00000541025 FAM163BP0C2L3 166 aa6.66□□□□□ -1.34
TTR-203ENST00000541025 CCDC130P13994 396 aa6.66□□□□□ -1.34
TTR-203ENST00000541025 CD58P19256 250 aa6.66□□□□□ -1.34
TTR-203ENST00000541025 GABRR2P28476 465 aa6.66□□□□□ -1.34
TTR-203ENST00000541025 FMO5P49326 533 aa6.66□□□□□ -1.34
TTR-203ENST00000541025 LGALS4P56470 323 aa6.66□□□□□ -1.34
TTR-203ENST00000541025 SIGLEC14Q08ET2 396 aa6.66□□□□□ -1.34
TTR-203ENST00000541025 INCA1Q0VD86 236 aa6.66□□□□□ -1.34
TTR-203ENST00000541025 SMARCB1Q12824 385 aa6.66□□□□□ -1.34
TTR-203ENST00000541025 TDGQ13569 410 aa6.66□□□□□ -1.34
TTR-203ENST00000541025 UGT8Q16880 541 aa6.66□□□□□ -1.34
TTR-203ENST00000541025 CCDC40Q4G0X9 1142 aa6.66□□□□□ -1.34
TTR-203ENST00000541025 FAM78AQ5JUQ0 283 aa6.66□□□□□ -1.34
TTR-203ENST00000541025 CYP4A22Q5TCH4 519 aa6.66□□□□□ -1.34
TTR-203ENST00000541025 TANGO2Q6ICL3 276 aa6.66□□□□□ -1.34
TTR-203ENST00000541025 SCN4BQ8IWT1 228 aa6.66□□□□□ -1.34
TTR-203ENST00000541025 ELMOD1Q8N336 334 aa6.66□□□□□ -1.34
TTR-203ENST00000541025 C12orf29Q8N999 325 aa6.66□□□□□ -1.34
TTR-203ENST00000541025 FBXL13Q8NEE6 735 aa6.66□□□□□ -1.34
TTR-203ENST00000541025 LMO3Q8TAP4 145 aa6.66□□□□□ -1.34
TTR-203ENST00000541025 TAF4BQ92750 862 aa6.66□□□□□ -1.34
TTR-203ENST00000541025 RSPRY1Q96DX4 576 aa6.66□□□□□ -1.34
TTR-203ENST00000541025 FUBP3Q96I24 572 aaKnown RBP eCLIP6.66□□□□□ -1.34
TTR-203ENST00000541025 KCNK16Q96T55 309 aa6.66□□□□□ -1.34
TTR-203ENST00000541025 ELOVL4Q9GZR5 314 aa6.66□□□□□ -1.34
TTR-203ENST00000541025 ZNF768Q9H5H4 540 aaKnown RBP6.66□□□□□ -1.34
TTR-203ENST00000541025 IGSF9Q9P2J2 1179 aa6.66□□□□□ -1.34
TTR-203ENST00000541025 RWDD2AQ9UIY3 292 aa6.66□□□□□ -1.34
TTR-203ENST00000541025 G3BP2Q9UN86 482 aaKnown RBP6.66□□□□□ -1.34
TTR-203ENST00000541025 EDARQ9UNE0 448 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms