RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 GJC1P36383 396 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 HADHAP40939 763 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 NAMPTP43490 491 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 SOX9P48436 509 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 NR2C2P49116 596 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 GATMP50440 423 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 ABCE1P61221 599 aaKnown RBP7.75□□□□□ -1.17
CCDC60-204ENST00000539847 BASP1P80723 227 aaKnown RBP7.75□□□□□ -1.17
CCDC60-204ENST00000539847 CDC42EP1Q00587 391 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 GAD2Q05329 585 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 TMEM62Q0P6H9 643 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 TRAP1Q12931 704 aaKnown RBP7.75□□□□□ -1.17
CCDC60-204ENST00000539847 COL9A2Q14055 689 aaPredicted RBP7.75□□□□□ -1.17
CCDC60-204ENST00000539847 UBAP2LQ14157 1087 aaKnown RBP7.75□□□□□ -1.17
CCDC60-204ENST00000539847 GRAMD1BQ3KR37 738 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 PDCD4Q53EL6 469 aaKnown RBP7.75□□□□□ -1.17
CCDC60-204ENST00000539847 XKR3Q5GH77 459 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 KIAA0319Q5VV43 1072 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 CES4AQ5XG92 561 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 LPCAT4Q643R3 524 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 PDPK2PQ6A1A2 396 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 TXNRD3NBQ6F5E7 133 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 LLGL2Q6P1M3 1020 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 KCNT2Q6UVM3 1135 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 BRSK2Q8IWQ3 736 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 CTAGE3PQ8IX95 158 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 HACE1Q8IYU2 909 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 DEFB107AQ8IZN7 70 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 TTC39CQ8N584 583 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 ARFGAP1Q8N6T3 406 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 CNTD1Q8N815 330 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 C1orf127Q8N9H9 656 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 KYQ8NBH2 561 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 GOLM1Q8NBJ4 401 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 KBTBD7Q8WVZ9 684 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 BSNDQ8WZ55 320 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 CDKL2Q92772 493 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 PMEPA1Q969W9 287 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 EAF1Q96JC9 268 aaPredicted RBP7.75□□□□□ -1.17
CCDC60-204ENST00000539847 FAM167AQ96KS9 214 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 ZFP42Q96MM3 310 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 TMEM74Q96NL1 305 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 CASD1Q96PB1 797 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 RNF157Q96PX1 679 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 CNPY3Q9BT09 278 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 YTHDF1Q9BYJ9 559 aaKnown RBP7.75□□□□□ -1.17
CCDC60-204ENST00000539847 MRM3Q9HC36 420 aaKnown RBP7.75□□□□□ -1.17
CCDC60-204ENST00000539847 GPRC5CQ9NQ84 441 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 ENTPD7Q9NQZ7 604 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 IGSF9Q9P2J2 1179 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 RSL24D1Q9UHA3 163 aaKnown RBP7.75□□□□□ -1.17
CCDC60-204ENST00000539847 RIMS3Q9UJD0 308 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 DNMT3LQ9UJW3 386 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 KIAA1257Q9ULG3 409 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 PAIP2BQ9ULR5 123 aaKnown RBP7.75□□□□□ -1.17
CCDC60-204ENST00000539847 AP4B1Q9Y6B7 739 aa7.75□□□□□ -1.17
CCDC60-204ENST00000539847 A0A0U1RQF3 1178 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 HMX2A2RU54 273 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 C2orf71A6NGG8 1288 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 TRIM64A6NGJ6 449 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 TRIM64BA6NI03 449 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 HIDE1A8MVS5 230 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 CXorf49A8MYA2 514 aaPredicted RBP7.74□□□□□ -1.17
CCDC60-204ENST00000539847 HNRNPRO43390 633 aaKnown RBP7.74□□□□□ -1.17
CCDC60-204ENST00000539847 KLF4O43474 513 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 GPR32O75388 356 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 TADA2AO75478 443 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 CCNE2O96020 404 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 ERBB2P04626 1255 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 IL1R2P27930 398 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 SLC5A2P31639 672 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 RFC1P35251 1148 aaPredicted RBP7.74□□□□□ -1.17
CCDC60-204ENST00000539847 ARL2P36404 184 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 PPARGP37231 505 aaPredicted RBP7.74□□□□□ -1.17
CCDC60-204ENST00000539847 GARSP41250 739 aaKnown RBP7.74□□□□□ -1.17
CCDC60-204ENST00000539847 MAGEA12P43365 314 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 ZNF143P52747 638 aaPredicted RBP7.74□□□□□ -1.17
CCDC60-204ENST00000539847 MYBPC1Q00872 1141 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 RAB33AQ14088 237 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 DUOXA2Q1HG44 320 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 ZNF423Q2M1K9 1284 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 PIGGQ5H8A4 983 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 RALGPS1Q5JS13 557 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 GRTP1Q5TC63 336 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 SLC9A4Q6AI14 798 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 KIAA1841Q6NSI8 718 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 FBXL19Q6PCT2 694 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 UNC5AQ6ZN44 842 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 DENND5BQ6ZUT9 1274 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 RFX8Q6ZV50 586 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 CDKL3Q8IVW4 592 aaPredicted RBP7.74□□□□□ -1.17
CCDC60-204ENST00000539847 ABI1Q8IZP0 508 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 PGAM4Q8N0Y7 254 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 SLC39A11Q8N1S5 342 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 PACRGLQ8N7B6 248 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 TDRD5Q8NAT2 981 aaKnown RBP7.74□□□□□ -1.17
CCDC60-204ENST00000539847 SMYD1Q8NB12 490 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 SLC7A14Q8TBB6 771 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 RDH11Q8TC12 318 aa7.74□□□□□ -1.17
CCDC60-204ENST00000539847 TRAPPC12Q8WVT3 735 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms