RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 GPR22Q99680 433 aa22.61■■□□□ 1.21
HOMER3-204ENST00000539827 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.61■■□□□ 1.21
HOMER3-204ENST00000539827 TMEM216Q9P0N5 145 aa22.61■■□□□ 1.21
HOMER3-204ENST00000539827 FBXO5Q9UKT4 447 aa22.61■■□□□ 1.21
HOMER3-204ENST00000539827 PCDHGC4Q9Y5F7 938 aa22.61■■□□□ 1.21
HOMER3-204ENST00000539827 ARL5AQ9Y689 179 aa22.61■■□□□ 1.21
HOMER3-204ENST00000539827 MYO7AQ13402 2215 aa22.61■■□□□ 1.21
HOMER3-204ENST00000539827 A0A096LPK6 155 aa22.61■■□□□ 1.21
HOMER3-204ENST00000539827 MT-CO1P00395 513 aa22.61■■□□□ 1.21
HOMER3-204ENST00000539827 MPOP05164 745 aa22.61■■□□□ 1.21
HOMER3-204ENST00000539827 RB1P06400 928 aa22.61■■□□□ 1.21
HOMER3-204ENST00000539827 PFKLP17858 780 aa22.61■■□□□ 1.21
HOMER3-204ENST00000539827 AVPR1AP37288 418 aa22.61■■□□□ 1.21
HOMER3-204ENST00000539827 SLC14A2Q15849 920 aa22.61■■□□□ 1.21
HOMER3-204ENST00000539827 ARMC3Q5W041 872 aa22.61■■□□□ 1.21
HOMER3-204ENST00000539827 KYAT3Q6YP21 454 aaKnown RBP22.61■■□□□ 1.21
HOMER3-204ENST00000539827 PLD6Q8N2A8 252 aaKnown RBP22.61■■□□□ 1.21
HOMER3-204ENST00000539827 PNPLA1Q8N8W4 532 aa22.61■■□□□ 1.21
HOMER3-204ENST00000539827 HDAC10Q969S8 669 aa22.61■■□□□ 1.21
HOMER3-204ENST00000539827 FBXO6Q9NRD1 293 aaPredicted RBP22.61■■□□□ 1.21
HOMER3-204ENST00000539827 ARL2BPQ9Y2Y0 163 aa22.61■■□□□ 1.21
HOMER3-204ENST00000539827 RAI2Q9Y5P3 530 aa22.61■■□□□ 1.21
HOMER3-204ENST00000539827 PLIN3O60664 434 aa22.6■■□□□ 1.21
HOMER3-204ENST00000539827 C2P06681 752 aa22.6■■□□□ 1.21
HOMER3-204ENST00000539827 BPGMP07738 259 aa22.6■■□□□ 1.21
HOMER3-204ENST00000539827 LMAN2Q12907 356 aa22.6■■□□□ 1.21
HOMER3-204ENST00000539827 UGP2Q16851 508 aa22.6■■□□□ 1.21
HOMER3-204ENST00000539827 ARHGAP15Q53QZ3 475 aa22.6■■□□□ 1.21
HOMER3-204ENST00000539827 CCDC121Q6ZUS5 278 aa22.6■■□□□ 1.21
HOMER3-204ENST00000539827 PTAR1Q7Z6K3 402 aaPredicted RBP22.6■■□□□ 1.21
HOMER3-204ENST00000539827 RBM23Q86U06 439 aaKnown RBP22.6■■□□□ 1.21
HOMER3-204ENST00000539827 CNPY4Q8N129 248 aa22.6■■□□□ 1.21
HOMER3-204ENST00000539827 OTUD6BQ8N6M0 293 aa22.6■■□□□ 1.21
HOMER3-204ENST00000539827 DCAF4L2Q8NA75 395 aa22.6■■□□□ 1.21
HOMER3-204ENST00000539827 OR6P1Q8NGX9 317 aa22.6■■□□□ 1.21
HOMER3-204ENST00000539827 RMDN1Q96DB5 314 aa22.6■■□□□ 1.21
HOMER3-204ENST00000539827 SMIM14Q96QK8 99 aa22.6■■□□□ 1.21
HOMER3-204ENST00000539827 TSSK1BQ9BXA7 367 aa22.6■■□□□ 1.21
HOMER3-204ENST00000539827 TASP1Q9H6P5 420 aa22.6■■□□□ 1.21
HOMER3-204ENST00000539827 OR51F1A6NGY5 319 aa22.59■■□□□ 1.21
HOMER3-204ENST00000539827 CCT8L1PA6NM43 557 aa22.59■■□□□ 1.21
HOMER3-204ENST00000539827 K7ERQ8 282 aa22.59■■□□□ 1.21
HOMER3-204ENST00000539827 HAUS5O94927 633 aa22.59■■□□□ 1.21
HOMER3-204ENST00000539827 FGF19O95750 216 aa22.59■■□□□ 1.21
HOMER3-204ENST00000539827 PDHA1P08559 390 aa22.59■■□□□ 1.21
HOMER3-204ENST00000539827 RHOAP61586 193 aa22.59■■□□□ 1.21
HOMER3-204ENST00000539827 OVGP1Q12889 678 aa22.59■■□□□ 1.21
HOMER3-204ENST00000539827 USP10Q14694 798 aaKnown RBP22.59■■□□□ 1.21
HOMER3-204ENST00000539827 CHI3L2Q15782 390 aa22.59■■□□□ 1.21
HOMER3-204ENST00000539827 INSCQ1MX18 579 aa22.59■■□□□ 1.21
HOMER3-204ENST00000539827 ATXN7L2Q5T6C5 722 aaPredicted RBP22.59■■□□□ 1.21
HOMER3-204ENST00000539827 NLRP9Q7RTR0 991 aa22.59■■□□□ 1.21
HOMER3-204ENST00000539827 DNAJC1Q96KC8 554 aaKnown RBP22.59■■□□□ 1.21
HOMER3-204ENST00000539827 TDRD1Q9BXT4 1180 aaKnown RBP22.59■■□□□ 1.21
HOMER3-204ENST00000539827 SPO11Q9Y5K1 396 aa22.59■■□□□ 1.21
HOMER3-204ENST00000539827 HELZP42694 1942 aaKnown RBP22.59■■□□□ 1.21
HOMER3-204ENST00000539827 AURKAO14965 403 aa22.59■■□□□ 1.21
HOMER3-204ENST00000539827 PRLP01236 227 aa22.59■■□□□ 1.21
HOMER3-204ENST00000539827 CES1P23141 567 aa22.59■■□□□ 1.21
HOMER3-204ENST00000539827 CD70P32970 193 aa22.59■■□□□ 1.21
HOMER3-204ENST00000539827 CD151P48509 253 aa22.59■■□□□ 1.21
HOMER3-204ENST00000539827 INO80DQ53TQ3 878 aaPredicted RBP22.59■■□□□ 1.21
HOMER3-204ENST00000539827 FYB2Q5VWT5 728 aa22.59■■□□□ 1.21
HOMER3-204ENST00000539827 NCEH1Q6PIU2 408 aa22.59■■□□□ 1.21
HOMER3-204ENST00000539827 RAPH1Q70E73 1250 aa22.59■■□□□ 1.21
HOMER3-204ENST00000539827 GRASPQ7Z6J2 395 aaPredicted RBP22.59■■□□□ 1.21
HOMER3-204ENST00000539827 MFSD6LQ8IWD5 586 aa22.59■■□□□ 1.21
HOMER3-204ENST00000539827 LPCAT1Q8NF37 534 aa22.59■■□□□ 1.21
HOMER3-204ENST00000539827 BRSK1Q8TDC3 778 aa22.59■■□□□ 1.21
HOMER3-204ENST00000539827 USP13Q92995 863 aaPredicted RBP22.59■■□□□ 1.21
HOMER3-204ENST00000539827 E2F7Q96AV8 911 aa22.59■■□□□ 1.21
HOMER3-204ENST00000539827 TBATAQ96M53 351 aa22.59■■□□□ 1.21
HOMER3-204ENST00000539827 HTATIP2Q9BUP3 242 aa22.59■■□□□ 1.21
HOMER3-204ENST00000539827 SUDS3Q9H7L9 328 aaPredicted RBP22.59■■□□□ 1.21
HOMER3-204ENST00000539827 FAM95CA0A1B0GW59 222 aa22.58■■□□□ 1.21
HOMER3-204ENST00000539827 PHGDHO43175 533 aaKnown RBP22.58■■□□□ 1.21
HOMER3-204ENST00000539827 GSRP00390 522 aa22.58■■□□□ 1.21
HOMER3-204ENST00000539827 PROCP04070 461 aa22.58■■□□□ 1.21
HOMER3-204ENST00000539827 DDX6P26196 483 aaKnown RBP eCLIP22.58■■□□□ 1.21
HOMER3-204ENST00000539827 PRAMEP78395 509 aa22.58■■□□□ 1.21
HOMER3-204ENST00000539827 TRAF2Q12933 501 aa22.58■■□□□ 1.21
HOMER3-204ENST00000539827 GPM6BQ13491 265 aa22.58■■□□□ 1.21
HOMER3-204ENST00000539827 FASTKD1Q53R41 847 aaKnown RBP22.58■■□□□ 1.21
HOMER3-204ENST00000539827 ZNF789Q5FWF6 425 aa22.58■■□□□ 1.21
HOMER3-204ENST00000539827 CES4AQ5XG92 561 aa22.58■■□□□ 1.21
HOMER3-204ENST00000539827 CNSTQ6PJW8 725 aa22.58■■□□□ 1.21
HOMER3-204ENST00000539827 RTL10Q7L3V2 364 aa22.58■■□□□ 1.21
HOMER3-204ENST00000539827 TRIM42Q8IWZ5 723 aa22.58■■□□□ 1.21
HOMER3-204ENST00000539827 OR13C4Q8NGS5 318 aa22.58■■□□□ 1.21
HOMER3-204ENST00000539827 CERS4Q9HA82 394 aa22.58■■□□□ 1.21
HOMER3-204ENST00000539827 ABCF3Q9NUQ8 709 aa22.58■■□□□ 1.21
HOMER3-204ENST00000539827 SIRPGQ9P1W8 387 aa22.58■■□□□ 1.21
HOMER3-204ENST00000539827 ATXN2Q99700 1313 aaKnown RBP22.58■■□□□ 1.21
HOMER3-204ENST00000539827 SLC7A4O43246 635 aa22.58■■□□□ 1.2
HOMER3-204ENST00000539827 XYLBO75191 536 aa22.58■■□□□ 1.2
HOMER3-204ENST00000539827 HADHAP40939 763 aa22.58■■□□□ 1.2
HOMER3-204ENST00000539827 MPP7Q5T2T1 576 aa22.58■■□□□ 1.2
HOMER3-204ENST00000539827 YTHDF3Q7Z739 585 aaKnown RBP22.58■■□□□ 1.2
HOMER3-204ENST00000539827 LDB1Q86U70 411 aaPredicted RBP22.58■■□□□ 1.2
HOMER3-204ENST00000539827 FIBINQ8TAL6 211 aa22.58■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms