RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 NRF1Q16656 503 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 CNPY1Q3B7I2 92 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 MANEALQ5VSG8 457 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 SPATA2LQ8IUW3 424 aaPredicted RBP14.17□□□□□ -0.14
UBE3B-210ENST00000539599 C2CD4AQ8NCU7 369 aaPredicted RBP14.17□□□□□ -0.14
UBE3B-210ENST00000539599 TTC16Q8NEE8 873 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 NAT14Q8WUY8 206 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 TSGA13Q96PP4 275 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 NR1H4Q96RI1 486 aaPredicted RBP14.17□□□□□ -0.14
UBE3B-210ENST00000539599 IL1RL2Q9HB29 575 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 NCKIPSDQ9NZQ3 722 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 HCSTQ9UBK5 93 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 DNAJB4Q9UDY4 337 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 RAD54BQ9Y620 910 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 E7ENX8 843 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 TNFRSF10BO14763 440 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 SIX3O95343 332 aaPredicted RBP14.17□□□□□ -0.14
UBE3B-210ENST00000539599 PEX11BO96011 259 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 PMLP29590 882 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 HUNKP57058 714 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 HNRNPDQ14103 355 aaKnown RBP14.17□□□□□ -0.14
UBE3B-210ENST00000539599 GSTA3Q16772 222 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 CST9Q5W186 159 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 TAF2Q6P1X5 1199 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 METTL23Q86XA0 190 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 HDAC10Q969S8 669 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 KATNAL1Q9BW62 490 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 ANKRD6Q9Y2G4 727 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 C15orf38-AP3S2A0A0A6YYH1 394 aa14.16□□□□□ -0.14
UBE3B-210ENST00000539599 TNPO2O14787 897 aaKnown RBP14.16□□□□□ -0.14
UBE3B-210ENST00000539599 PEX1O43933 1283 aa14.16□□□□□ -0.14
UBE3B-210ENST00000539599 RNASEH2AO75792 299 aaKnown RBP14.16□□□□□ -0.14
UBE3B-210ENST00000539599 ANXA9O76027 345 aa14.16□□□□□ -0.14
UBE3B-210ENST00000539599 FESP07332 822 aa14.16□□□□□ -0.14
UBE3B-210ENST00000539599 ATP6V1B1P15313 513 aa14.16□□□□□ -0.14
UBE3B-210ENST00000539599 GALNT3Q14435 633 aa14.16□□□□□ -0.14
UBE3B-210ENST00000539599 IL23RQ5VWK5 629 aa14.16□□□□□ -0.14
UBE3B-210ENST00000539599 IYDQ6PHW0 289 aa14.16□□□□□ -0.14
UBE3B-210ENST00000539599 ARPINQ7Z6K5 226 aa14.16□□□□□ -0.14
UBE3B-210ENST00000539599 ADGRG6Q86SQ4 1221 aa14.16□□□□□ -0.14
UBE3B-210ENST00000539599 CNTN4Q8IWV2 1026 aa14.16□□□□□ -0.14
UBE3B-210ENST00000539599 PGBD5Q8N414 524 aa14.16□□□□□ -0.14
UBE3B-210ENST00000539599 ATAD1Q8NBU5 361 aa14.16□□□□□ -0.14
UBE3B-210ENST00000539599 ICA1LQ8NDH6 482 aa14.16□□□□□ -0.14
UBE3B-210ENST00000539599 RP9Q8TA86 221 aaKnown RBP14.16□□□□□ -0.14
UBE3B-210ENST00000539599 SPPL2BQ8TCT7 592 aa14.16□□□□□ -0.14
UBE3B-210ENST00000539599 JADE3Q92613 823 aa14.16□□□□□ -0.14
UBE3B-210ENST00000539599 IGSF8Q969P0 613 aa14.16□□□□□ -0.14
UBE3B-210ENST00000539599 C3orf30Q96M34 536 aa14.16□□□□□ -0.14
UBE3B-210ENST00000539599 CYP2S1Q96SQ9 504 aa14.16□□□□□ -0.14
UBE3B-210ENST00000539599 SPATS2LQ9NUQ6 558 aaKnown RBP14.16□□□□□ -0.14
UBE3B-210ENST00000539599 FNDC3AQ9Y2H6 1198 aaKnown RBP14.16□□□□□ -0.14
UBE3B-210ENST00000539599 A0A1B0GTL3 188 aa14.16□□□□□ -0.14
UBE3B-210ENST00000539599 FBP2O00757 339 aa14.16□□□□□ -0.14
UBE3B-210ENST00000539599 GSTT1P30711 240 aa14.16□□□□□ -0.14
UBE3B-210ENST00000539599 COG7P83436 770 aa14.16□□□□□ -0.14
UBE3B-210ENST00000539599 PTPRRQ15256 657 aa14.16□□□□□ -0.14
UBE3B-210ENST00000539599 AGKQ53H12 422 aa14.16□□□□□ -0.14
UBE3B-210ENST00000539599 TECRLQ5HYJ1 363 aa14.16□□□□□ -0.14
UBE3B-210ENST00000539599 METTL21CQ5VZV1 264 aa14.16□□□□□ -0.14
UBE3B-210ENST00000539599 RAP1GAP2Q684P5 730 aa14.16□□□□□ -0.14
UBE3B-210ENST00000539599 KDELC1Q6UW63 502 aa14.16□□□□□ -0.14
UBE3B-210ENST00000539599 CUZD1Q86UP6 607 aa14.16□□□□□ -0.14
UBE3B-210ENST00000539599 C2orf69Q8N8R5 385 aa14.16□□□□□ -0.14
UBE3B-210ENST00000539599 CNDP1Q96KN2 507 aa14.16□□□□□ -0.14
UBE3B-210ENST00000539599 RPL10LQ96L21 214 aaKnown RBP14.16□□□□□ -0.14
UBE3B-210ENST00000539599 KCNA7Q96RP8 456 aa14.16□□□□□ -0.14
UBE3B-210ENST00000539599 GMIPQ9P107 970 aa14.16□□□□□ -0.14
UBE3B-210ENST00000539599 DSEQ9UL01 958 aa14.16□□□□□ -0.14
UBE3B-210ENST00000539599 GIT1Q9Y2X7 761 aa14.16□□□□□ -0.14
UBE3B-210ENST00000539599 ARL5AQ9Y689 179 aa14.16□□□□□ -0.14
UBE3B-210ENST00000539599 MIA3Q5JRA6 1907 aa14.15□□□□□ -0.14
UBE3B-210ENST00000539599 MUSKO15146 869 aa14.15□□□□□ -0.14
UBE3B-210ENST00000539599 MMP2P08253 660 aa14.15□□□□□ -0.14
UBE3B-210ENST00000539599 PRDX6P30041 224 aa14.15□□□□□ -0.14
UBE3B-210ENST00000539599 ACVRL1P37023 503 aa14.15□□□□□ -0.14
UBE3B-210ENST00000539599 GEMP55040 296 aa14.15□□□□□ -0.14
UBE3B-210ENST00000539599 PDAP1Q13442 181 aaKnown RBP14.15□□□□□ -0.14
UBE3B-210ENST00000539599 FRG1Q14331 258 aaKnown RBP14.15□□□□□ -0.14
UBE3B-210ENST00000539599 OGFRL1Q5TC84 451 aaPredicted RBP14.15□□□□□ -0.14
UBE3B-210ENST00000539599 UGT2A3Q6UWM9 527 aa14.15□□□□□ -0.14
UBE3B-210ENST00000539599 C16orf89Q6UX73 402 aa14.15□□□□□ -0.14
UBE3B-210ENST00000539599 CYHR1Q6ZMK1 362 aa14.15□□□□□ -0.14
UBE3B-210ENST00000539599 RTL3Q8N8U3 475 aaKnown RBP14.15□□□□□ -0.14
UBE3B-210ENST00000539599 NSUN5Q96P11 429 aaKnown RBP14.15□□□□□ -0.14
UBE3B-210ENST00000539599 ABCC13Q9NSE7 274 aa14.15□□□□□ -0.14
UBE3B-210ENST00000539599 CLIC5Q9NZA1 410 aa14.15□□□□□ -0.14
UBE3B-210ENST00000539599 RIMS3Q9UJD0 308 aa14.15□□□□□ -0.14
UBE3B-210ENST00000539599 GABRQQ9UN88 632 aa14.15□□□□□ -0.14
UBE3B-210ENST00000539599 PSMD13Q9UNM6 376 aa14.15□□□□□ -0.14
UBE3B-210ENST00000539599 SLC27A5Q9Y2P5 690 aa14.15□□□□□ -0.14
UBE3B-210ENST00000539599 MYO16Q9Y6X6 1858 aa14.15□□□□□ -0.14
UBE3B-210ENST00000539599 SUPT7LO94864 414 aa14.15□□□□□ -0.14
UBE3B-210ENST00000539599 CRTAMO95727 393 aa14.15□□□□□ -0.14
UBE3B-210ENST00000539599 FOXA1P55317 472 aa14.15□□□□□ -0.14
UBE3B-210ENST00000539599 PTK2BQ14289 1009 aa14.15□□□□□ -0.14
UBE3B-210ENST00000539599 SEMA3AQ14563 771 aa14.15□□□□□ -0.14
UBE3B-210ENST00000539599 LPIN1Q14693 890 aa14.15□□□□□ -0.14
UBE3B-210ENST00000539599 LIN52Q52LA3 116 aa14.15□□□□□ -0.14
UBE3B-210ENST00000539599 HECTD2Q5U5R9 776 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms