RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 CDC6Q99741 560 aa15.81■□□□□ 0.12
CIT-210ENST00000539413 CNTNAP3Q9BZ76 1288 aa15.81■□□□□ 0.12
CIT-210ENST00000539413 PCDH12Q9NPG4 1184 aa15.81■□□□□ 0.12
CIT-210ENST00000539413 DOCK9Q9BZ29 2069 aa15.8■□□□□ 0.12
CIT-210ENST00000539413 FPGTO14772 594 aa15.8■□□□□ 0.12
CIT-210ENST00000539413 HYAL3O43820 417 aaPredicted RBP15.8■□□□□ 0.12
CIT-210ENST00000539413 SDC3O75056 442 aa15.8■□□□□ 0.12
CIT-210ENST00000539413 TM7SF2O76062 418 aa15.8■□□□□ 0.12
CIT-210ENST00000539413 ATXN1LP0C7T5 689 aaKnown RBP15.8■□□□□ 0.12
CIT-210ENST00000539413 CR2P20023 1033 aa15.8■□□□□ 0.12
CIT-210ENST00000539413 KDELR1P24390 212 aa15.8■□□□□ 0.12
CIT-210ENST00000539413 SUOXP51687 545 aa15.8■□□□□ 0.12
CIT-210ENST00000539413 MAXP61244 160 aa15.8■□□□□ 0.12
CIT-210ENST00000539413 AP1S1P61966 158 aa15.8■□□□□ 0.12
CIT-210ENST00000539413 ELP6Q0PNE2 266 aa15.8■□□□□ 0.12
CIT-210ENST00000539413 GALNT2Q10471 571 aa15.8■□□□□ 0.12
CIT-210ENST00000539413 TCEAL1Q15170 157 aa15.8■□□□□ 0.12
CIT-210ENST00000539413 INAVAQ3KP66 663 aa15.8■□□□□ 0.12
CIT-210ENST00000539413 BRAT1Q6PJG6 821 aa15.8■□□□□ 0.12
CIT-210ENST00000539413 KANSL1Q7Z3B3 1105 aa15.8■□□□□ 0.12
CIT-210ENST00000539413 PTAR1Q7Z6K3 402 aaPredicted RBP15.8■□□□□ 0.12
CIT-210ENST00000539413 SLCO6A1Q86UG4 719 aa15.8■□□□□ 0.12
CIT-210ENST00000539413 PQLC3Q8N755 202 aa15.8■□□□□ 0.12
CIT-210ENST00000539413 DENND6BQ8NEG7 585 aa15.8■□□□□ 0.12
CIT-210ENST00000539413 FAM174AQ8TBP5 190 aa15.8■□□□□ 0.12
CIT-210ENST00000539413 ECHDC3Q96DC8 303 aa15.8■□□□□ 0.12
CIT-210ENST00000539413 SCNM1Q9BWG6 230 aa15.8■□□□□ 0.12
CIT-210ENST00000539413 GPR27Q9NS67 375 aa15.8■□□□□ 0.12
CIT-210ENST00000539413 TOR4AQ9NXH8 423 aa15.8■□□□□ 0.12
CIT-210ENST00000539413 TFR2Q9UP52 801 aa15.8■□□□□ 0.12
CIT-210ENST00000539413 HYOU1Q9Y4L1 999 aa15.8■□□□□ 0.12
CIT-210ENST00000539413 NCOR2Q9Y618 2525 aa15.79■□□□□ 0.12
CIT-210ENST00000539413 LRRD1A4D1F6 860 aa15.79■□□□□ 0.12
CIT-210ENST00000539413 GOLGA8CPA6NN73 597 aa15.79■□□□□ 0.12
CIT-210ENST00000539413 TRAFD1O14545 582 aaPredicted RBP15.79■□□□□ 0.12
CIT-210ENST00000539413 RIOK3O14730 519 aaKnown RBP15.79■□□□□ 0.12
CIT-210ENST00000539413 LCA5LO95447 670 aa15.79■□□□□ 0.12
CIT-210ENST00000539413 IGFALSP35858 605 aa15.79■□□□□ 0.12
CIT-210ENST00000539413 HSPA9P38646 679 aaKnown RBP15.79■□□□□ 0.12
CIT-210ENST00000539413 GARSP41250 739 aaKnown RBP15.79■□□□□ 0.12
CIT-210ENST00000539413 MMP13P45452 471 aa15.79■□□□□ 0.12
CIT-210ENST00000539413 GBE1Q04446 702 aa15.79■□□□□ 0.12
CIT-210ENST00000539413 MARC1Q5VT66 337 aa15.79■□□□□ 0.12
CIT-210ENST00000539413 RAB44Q7Z6P3 723 aaPredicted RBP15.79■□□□□ 0.12
CIT-210ENST00000539413 BBS5Q8N3I7 341 aa15.79■□□□□ 0.12
CIT-210ENST00000539413 CHCHD4Q8N4Q1 142 aa15.79■□□□□ 0.12
CIT-210ENST00000539413 EID2Q8N6I1 236 aa15.79■□□□□ 0.12
CIT-210ENST00000539413 PAF1Q8N7H5 531 aa15.79■□□□□ 0.12
CIT-210ENST00000539413 LRRN4Q8WUT4 740 aa15.79■□□□□ 0.12
CIT-210ENST00000539413 NSMCE1Q8WV22 266 aa15.79■□□□□ 0.12
CIT-210ENST00000539413 CENPTQ96BT3 561 aa15.79■□□□□ 0.12
CIT-210ENST00000539413 RNF157Q96PX1 679 aa15.79■□□□□ 0.12
CIT-210ENST00000539413 NUDCD1Q96RS6 583 aa15.79■□□□□ 0.12
CIT-210ENST00000539413 MGME1Q9BQP7 344 aa15.79■□□□□ 0.12
CIT-210ENST00000539413 MBNL1Q9NR56 388 aaKnown RBP15.79■□□□□ 0.12
CIT-210ENST00000539413 APOBEC2Q9Y235 224 aaKnown RBP15.79■□□□□ 0.12
CIT-210ENST00000539413 ATP8A1Q9Y2Q0 1164 aa15.79■□□□□ 0.12
CIT-210ENST00000539413 COQ6Q9Y2Z9 468 aa15.79■□□□□ 0.12
CIT-210ENST00000539413 PCDHGC4Q9Y5F7 938 aa15.79■□□□□ 0.12
CIT-210ENST00000539413 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.78■□□□□ 0.12
CIT-210ENST00000539413 TNFSF14O43557 240 aa15.78■□□□□ 0.12
CIT-210ENST00000539413 TRIM16O95361 564 aa15.78■□□□□ 0.12
CIT-210ENST00000539413 C6P13671 934 aa15.78■□□□□ 0.12
CIT-210ENST00000539413 MMP12P39900 470 aa15.78■□□□□ 0.12
CIT-210ENST00000539413 RABIFP47224 123 aa15.78■□□□□ 0.12
CIT-210ENST00000539413 LIG3P49916 1009 aa15.78■□□□□ 0.12
CIT-210ENST00000539413 PFN3P60673 137 aa15.78■□□□□ 0.12
CIT-210ENST00000539413 SLC10A2Q12908 348 aaPredicted RBP15.78■□□□□ 0.12
CIT-210ENST00000539413 FZD2Q14332 565 aa15.78■□□□□ 0.12
CIT-210ENST00000539413 ZNF542PQ5EBM4 170 aa15.78■□□□□ 0.12
CIT-210ENST00000539413 TPRG1LQ5T0D9 272 aa15.78■□□□□ 0.12
CIT-210ENST00000539413 ERAP2Q6P179 960 aa15.78■□□□□ 0.12
CIT-210ENST00000539413 DCP2Q8IU60 420 aaKnown RBP15.78■□□□□ 0.12
CIT-210ENST00000539413 LRRC49Q8IUZ0 686 aa15.78■□□□□ 0.12
CIT-210ENST00000539413 CCDC170Q8IYT3 715 aa15.78■□□□□ 0.12
CIT-210ENST00000539413 TEX26Q8N6G2 289 aa15.78■□□□□ 0.12
CIT-210ENST00000539413 TP53I13Q8NBR0 393 aaPredicted RBP15.78■□□□□ 0.12
CIT-210ENST00000539413 ADAMTS14Q8WXS8 1223 aa15.78■□□□□ 0.12
CIT-210ENST00000539413 NOD2Q9HC29 1040 aa15.78■□□□□ 0.12
CIT-210ENST00000539413 NT5MQ9NPB1 228 aa15.78■□□□□ 0.12
CIT-210ENST00000539413 SCUBE2Q9NQ36 999 aa15.78■□□□□ 0.12
CIT-210ENST00000539413 FTSJ1Q9UET6 329 aa15.78■□□□□ 0.12
CIT-210ENST00000539413 KLK13Q9UKR3 277 aa15.78■□□□□ 0.12
CIT-210ENST00000539413 PCDHA13Q9Y5I0 950 aa15.78■□□□□ 0.12
CIT-210ENST00000539413 SOWAHDA6NJG2 315 aa15.77■□□□□ 0.12
CIT-210ENST00000539413 C3orf70A6NLC5 250 aaPredicted RBP15.77■□□□□ 0.12
CIT-210ENST00000539413 KRT1P04264 644 aa15.77■□□□□ 0.12
CIT-210ENST00000539413 TNNT1P13805 278 aa15.77■□□□□ 0.12
CIT-210ENST00000539413 COMTP21964 271 aa15.77■□□□□ 0.12
CIT-210ENST00000539413 CYLC1P35663 651 aaPredicted RBP15.77■□□□□ 0.12
CIT-210ENST00000539413 SLC1A1P43005 524 aa15.77■□□□□ 0.12
CIT-210ENST00000539413 NOP2P46087 812 aaKnown RBP15.77■□□□□ 0.12
CIT-210ENST00000539413 TRAF2Q12933 501 aa15.77■□□□□ 0.12
CIT-210ENST00000539413 RALGDSQ12967 914 aa15.77■□□□□ 0.12
CIT-210ENST00000539413 PDE1CQ14123 709 aaPredicted RBP15.77■□□□□ 0.12
CIT-210ENST00000539413 SPA17Q15506 151 aa15.77■□□□□ 0.12
CIT-210ENST00000539413 IFI16Q16666 785 aaKnown RBP15.77■□□□□ 0.12
CIT-210ENST00000539413 RHOT1Q8IXI2 618 aa15.77■□□□□ 0.12
CIT-210ENST00000539413 SLC25A45Q8N413 288 aa15.77■□□□□ 0.12
CIT-210ENST00000539413 PDCD6IPQ8WUM4 868 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms