RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 NCEH1Q6PIU2 408 aa10.33□□□□□ -0.76
CLPB-210ENST00000539148 DPY19L3Q6ZPD9 716 aa10.33□□□□□ -0.76
CLPB-210ENST00000539148 USP45Q70EL2 814 aa10.33□□□□□ -0.76
CLPB-210ENST00000539148 CNTD1Q8N815 330 aa10.33□□□□□ -0.76
CLPB-210ENST00000539148 DNAAF3Q8N9W5 541 aa10.33□□□□□ -0.76
CLPB-210ENST00000539148 GABPB2Q8TAK5 448 aaPredicted RBP10.33□□□□□ -0.76
CLPB-210ENST00000539148 SPOCK2Q92563 424 aa10.33□□□□□ -0.76
CLPB-210ENST00000539148 PTPRN2Q92932 1015 aa10.33□□□□□ -0.76
CLPB-210ENST00000539148 MYO19Q96H55 970 aa10.33□□□□□ -0.76
CLPB-210ENST00000539148 TMEM109Q9BVC6 243 aa10.33□□□□□ -0.76
CLPB-210ENST00000539148 ROPN1BQ9BZX4 212 aaPredicted RBP10.33□□□□□ -0.76
CLPB-210ENST00000539148 RSPH9Q9H1X1 276 aaPredicted RBP10.33□□□□□ -0.76
CLPB-210ENST00000539148 PABPC3Q9H361 631 aaKnown RBP10.33□□□□□ -0.76
CLPB-210ENST00000539148 SUV39H2Q9H5I1 410 aa10.33□□□□□ -0.76
CLPB-210ENST00000539148 ROPN1Q9HAT0 212 aaPredicted RBP10.33□□□□□ -0.76
CLPB-210ENST00000539148 PRSS16Q9NQE7 514 aa10.33□□□□□ -0.76
CLPB-210ENST00000539148 VPS18Q9P253 973 aa10.33□□□□□ -0.76
CLPB-210ENST00000539148 BCCIPQ9P287 314 aaKnown RBP eCLIP10.33□□□□□ -0.76
CLPB-210ENST00000539148 EVLQ9UI08 416 aaPredicted RBP10.33□□□□□ -0.76
CLPB-210ENST00000539148 ANAPC5Q9UJX4 755 aa10.33□□□□□ -0.76
CLPB-210ENST00000539148 TMEM221A6NGB7 291 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 M0R296 226 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 KPNA3O00505 521 aaPredicted RBP10.32□□□□□ -0.76
CLPB-210ENST00000539148 DNALI1O14645 258 aaPredicted RBP10.32□□□□□ -0.76
CLPB-210ENST00000539148 POLR3GO15318 223 aaPredicted RBP10.32□□□□□ -0.76
CLPB-210ENST00000539148 SLC7A4O43246 635 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 SIN3BO75182 1162 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 ZNF217O75362 1048 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 PMPCBO75439 489 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 NDST3O95803 873 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 IVLP07476 585 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 CYP2A6P11509 494 aaPredicted RBP10.32□□□□□ -0.76
CLPB-210ENST00000539148 MLNP12872 115 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 AOC1P19801 751 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 PRKCHP24723 683 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 ITGB7P26010 798 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 MAGEA6P43360 314 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 GRIA4P48058 902 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 CXCL12P48061 93 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 VPS41P49754 854 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 NUMBP49757 651 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 GDF10P55107 478 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 MAXP61244 160 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 DSC2Q02487 901 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 DHX9Q08211 1270 aaKnown RBP10.32□□□□□ -0.76
CLPB-210ENST00000539148 ELP6Q0PNE2 266 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 CDH17Q12864 832 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 TRIP13Q15645 432 aaPredicted RBP10.32□□□□□ -0.76
CLPB-210ENST00000539148 ATXN7L2Q5T6C5 722 aaPredicted RBP10.32□□□□□ -0.76
CLPB-210ENST00000539148 C9orf64Q5T6V5 341 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 IZUMO3Q5VZ72 239 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 FBXL19Q6PCT2 694 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 USP30Q70CQ3 517 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 B4GALNT4Q76KP1 1039 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 TMC3Q7Z5M5 1100 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 BMP8AQ7Z5Y6 402 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 RELL1Q8IUW5 271 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 PDIK1LQ8N165 341 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 PGBD3Q8N328 593 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 MCUQ8NE86 351 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 TSTD1Q8NFU3 115 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 ARRDC2Q8TBH0 407 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 PIP4K2CQ8TBX8 421 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 GANCQ8TET4 914 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 PDCD6IPQ8WUM4 868 aaKnown RBP10.32□□□□□ -0.76
CLPB-210ENST00000539148 ART4Q93070 314 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 RMDN1Q96DB5 314 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 SIPA1Q96FS4 1042 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 EXOC2Q96KP1 924 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 RBM15Q96T37 977 aaKnown RBP eCLIP10.32□□□□□ -0.76
CLPB-210ENST00000539148 OMDQ99983 421 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 TBL1YQ9BQ87 522 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 CCDC77Q9BR77 488 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 NAT9Q9BTE0 207 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 CEP41Q9BYV8 373 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 TRABDQ9H4I3 376 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 C10orf88Q9H8K7 445 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 ETNK1Q9HBU6 452 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 NOD2Q9HC29 1040 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 CD320Q9NPF0 282 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 KCTD5Q9NXV2 234 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 BFARQ9NZS9 450 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 PHTF1Q9UMS5 762 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 RAI2Q9Y5P3 530 aa10.32□□□□□ -0.76
CLPB-210ENST00000539148 MAGEB16A2A368 324 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 AGPSO00116 658 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 LEFTY1O75610 366 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 SUN1O94901 812 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 APBB3O95704 486 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 CRTAMO95727 393 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 CPP00450 1065 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 UGT2B4P06133 528 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 HLA-EP13747 358 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 OXTRP30559 389 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 CD68P34810 354 aaPredicted RBP10.31□□□□□ -0.76
CLPB-210ENST00000539148 HSD17B3P37058 310 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 WASP42768 502 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 NPY2RP49146 381 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 NEK3P51956 506 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 NRLP54845 237 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms