RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 DUS2Q9NX74 493 aaKnown RBP6.77□□□□□ -1.33
USP28-207ENST00000538475 SLC9A2Q9UBY0 812 aa6.77□□□□□ -1.33
USP28-207ENST00000538475 MARCOQ9UEW3 520 aaPredicted RBP6.77□□□□□ -1.33
USP28-207ENST00000538475 CHORDC1Q9UHD1 332 aaPredicted RBP6.77□□□□□ -1.33
USP28-207ENST00000538475 EMCNQ9ULC0 261 aa6.77□□□□□ -1.33
USP28-207ENST00000538475 ANKRD6Q9Y2G4 727 aa6.77□□□□□ -1.33
USP28-207ENST00000538475 RAD54BQ9Y620 910 aa6.77□□□□□ -1.33
USP28-207ENST00000538475 KIAA1217Q5T5P2 1943 aa6.77□□□□□ -1.33
USP28-207ENST00000538475 ANK1P16157 1881 aa6.77□□□□□ -1.33
USP28-207ENST00000538475 LOC100653049A0A140TA62 436 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 A0A1W2PPW3 197 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 SYCE1LA8MT33 242 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 BBIP1A8MTZ0 92 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 C9IYK1 514 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 PI4K2BG5E9Z4 385 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 CYB561D2O14569 222 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 AIM2O14862 343 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 TRIM24O15164 1050 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 MSI1O43347 362 aaKnown RBP6.76□□□□□ -1.33
USP28-207ENST00000538475 SCO2O43819 266 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 ZBTB14O43829 449 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 MRPS14O60783 128 aaKnown RBP6.76□□□□□ -1.33
USP28-207ENST00000538475 GMNNO75496 209 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 DGKIO75912 1065 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 CABYRO75952 493 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 KRT34O76011 436 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 HSPA4LO95757 839 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 HLA-DOAP06340 250 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 GPIP06744 558 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 IL1R1P14778 569 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 NAT1P18440 290 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 GSTM2P28161 218 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 HSPA1LP34931 641 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 CAPGP40121 348 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 GPD2P43304 727 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 RPL14P50914 215 aaKnown RBP6.76□□□□□ -1.33
USP28-207ENST00000538475 PSME3P61289 254 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 MS4A2Q01362 244 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 SLC25A11Q02978 314 aaKnown RBP6.76□□□□□ -1.33
USP28-207ENST00000538475 SOX4Q06945 474 aaPredicted RBP6.76□□□□□ -1.33
USP28-207ENST00000538475 ILF2Q12905 390 aaKnown RBP6.76□□□□□ -1.33
USP28-207ENST00000538475 GRM1Q13255 1194 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 SLC12A1Q13621 1099 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 ATP1A4Q13733 1029 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 LRP8Q14114 963 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 GK3PQ14409 553 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 CYP2A13Q16696 494 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 ZNF484Q5JVG2 852 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 SEL1L3Q68CR1 1132 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 OGFOD2Q6N063 350 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 UNC5AQ6ZN44 842 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 PLEKHG7Q6ZR37 379 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 KIAA0408Q6ZU52 694 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 USP51Q70EK9 711 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 HERC6Q8IVU3 1022 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 CDKL3Q8IVW4 592 aaPredicted RBP6.76□□□□□ -1.33
USP28-207ENST00000538475 UNC45BQ8IWX7 931 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 C4orf19Q8IY42 314 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 CADM3Q8N126 398 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 ZNF786Q8N393 782 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 AFAP1L2Q8N4X5 818 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 DHRSXQ8N5I4 330 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 FAM47BQ8NA70 645 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 DEPDC1BQ8WUY9 529 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 ROPN1LQ96C74 230 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 CENPNQ96H22 339 aaPredicted RBP6.76□□□□□ -1.33
USP28-207ENST00000538475 SH3YL1Q96HL8 342 aaPredicted RBP6.76□□□□□ -1.33
USP28-207ENST00000538475 WNK4Q96J92 1243 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 SIGLEC10Q96LC7 697 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 CPXM1Q96SM3 734 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 CYP2S1Q96SQ9 504 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 CPNE1Q99829 537 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 NRSN2Q9GZP1 204 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 IL22Q9GZX6 179 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 KLHL25Q9H0H3 589 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 TRPV6Q9H1D0 765 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 LHX5Q9H2C1 402 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 SNX25Q9H3E2 840 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 PCIF1Q9H4Z3 704 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 NANOGQ9H9S0 305 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 POLR1BQ9H9Y6 1135 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 LIN28AQ9H9Z2 209 aaKnown RBP6.76□□□□□ -1.33
USP28-207ENST00000538475 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.76□□□□□ -1.33
USP28-207ENST00000538475 LRRC4Q9HBW1 653 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 AKIP1Q9NQ31 210 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 NECTIN3Q9NQS3 549 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 PNPOQ9NVS9 261 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 GDAP2Q9NXN4 497 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 GPRC5DQ9NZD1 345 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 GPN3Q9UHW5 284 aaPredicted RBP6.76□□□□□ -1.33
USP28-207ENST00000538475 TBX20Q9UMR3 447 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 PCDHGB4Q9UN71 923 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 CDC14AQ9UNH5 594 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 CDYLQ9Y232 598 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 WBP11Q9Y2W2 641 aaKnown RBP6.76□□□□□ -1.33
USP28-207ENST00000538475 TESMINQ9Y4I5 508 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 PCDHGB5Q9Y5G0 923 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 NOX1Q9Y5S8 564 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 A3GALT2U3KPV4 340 aa6.76□□□□□ -1.33
USP28-207ENST00000538475 SSC5DA1L4H1 1573 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms