RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 TTC7BQ86TV6 843 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 VPS36Q86VN1 386 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 PSTKQ8IV42 348 aaKnown RBP8.74□□□□□ -1.01
DDB1-212ENST00000538470 MCOLN2Q8IZK6 566 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 SDR16C5Q8N3Y7 309 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 FSTL5Q8N475 847 aaPredicted RBP8.74□□□□□ -1.01
DDB1-212ENST00000538470 ATL2Q8NHH9 583 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 FNIP1Q8TF40 1166 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 ZNF641Q96N77 438 aaPredicted RBP8.74□□□□□ -1.01
DDB1-212ENST00000538470 LGMNQ99538 433 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 IL12RB2Q99665 862 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 SYT11Q9BT88 431 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 BOCQ9BWV1 1114 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 SLC13A1Q9BZW2 595 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 ABCG4Q9H172 646 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 LRRC19Q9H756 370 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 POLR1BQ9H9Y6 1135 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 PARVAQ9NVD7 372 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 KLF15Q9UIH9 416 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 AP4E1Q9UPM8 1137 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 PCDHB1Q9Y5F3 818 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 GCN1Q92616 2671 aaKnown RBP8.74□□□□□ -1.01
DDB1-212ENST00000538470 HELZ2Q9BYK8 2649 aaKnown RBP8.73□□□□□ -1.01
DDB1-212ENST00000538470 COL6A6A6NMZ7 2263 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 TEX51A0A1B0GUA7 166 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 CFAP69A5D8W1 941 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 ARHGAP42A6NI28 874 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 ATXN7O15265 892 aaPredicted RBP8.73□□□□□ -1.01
DDB1-212ENST00000538470 PRAMEF11O60813 436 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 MMP20O60882 483 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 USP12O75317 370 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 RASGRP1O95267 797 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 ANXA6P08133 673 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 ALPIP09923 528 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 ATP1A3P13637 1013 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 C6P13671 934 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 TIMP2P16035 220 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 PSMA2P25787 234 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 ITPKBP27987 946 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 HTR1BP28222 390 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 SERPINA4P29622 427 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 EIF4A3P38919 411 aaKnown RBP8.73□□□□□ -1.01
DDB1-212ENST00000538470 MMP12P39900 470 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 PPARDQ03181 441 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 TLE3Q04726 772 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 MTM1Q13496 603 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 RFTN1Q14699 578 aaPredicted RBP8.73□□□□□ -1.01
DDB1-212ENST00000538470 NFATC4Q14934 902 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 LRRC14Q15048 493 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 CDKN3Q16667 212 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 ISXQ2M1V0 245 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 KLHL40Q2TBA0 621 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 DEFB133Q30KQ1 61 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 PRRT3Q5FWE3 981 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 BROXQ5VW32 411 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 PLEKHA7Q6IQ23 1121 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 ESRP1Q6NXG1 681 aaKnown RBP8.73□□□□□ -1.01
DDB1-212ENST00000538470 GUSBP11Q6P575 273 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 RBM44Q6ZP01 1051 aaKnown RBP8.73□□□□□ -1.01
DDB1-212ENST00000538470 EFL1Q7Z2Z2 1120 aaKnown RBP8.73□□□□□ -1.01
DDB1-212ENST00000538470 RBFAQ8N0V3 343 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 AOPEPQ8N6M6 819 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 ARL10Q8N8L6 244 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 CRELD1Q96HD1 420 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 HIC2Q96JB3 615 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 FCRL3Q96P31 734 aaPredicted RBP8.73□□□□□ -1.01
DDB1-212ENST00000538470 BBC3Q96PG8 261 aaPredicted RBP8.73□□□□□ -1.01
DDB1-212ENST00000538470 BPIFA3Q9BQP9 254 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 MAGEB5Q9BZ81 275 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 NAT10Q9H0A0 1025 aaKnown RBP8.73□□□□□ -1.01
DDB1-212ENST00000538470 KLC2Q9H0B6 622 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 HSD3B7Q9H2F3 369 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 SUV39H2Q9H5I1 410 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 ATP13A3Q9H7F0 1226 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 SP110Q9HB58 689 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 THSD1Q9NS62 852 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 ATP8A1Q9Y2Q0 1164 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 SCINQ9Y6U3 715 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 SCN8AQ9UQD0 1980 aa8.73□□□□□ -1.01
DDB1-212ENST00000538470 ARHGEF17Q96PE2 2063 aaPredicted RBP8.73□□□□□ -1.01
DDB1-212ENST00000538470 CPED1A4D0V7 1026 aa8.72□□□□□ -1.01
DDB1-212ENST00000538470 EEF2KO00418 725 aaKnown RBP8.72□□□□□ -1.01
DDB1-212ENST00000538470 INSIG1O15503 277 aa8.72□□□□□ -1.01
DDB1-212ENST00000538470 RNF8O76064 485 aa8.72□□□□□ -1.01
DDB1-212ENST00000538470 PIGNO95427 931 aa8.72□□□□□ -1.01
DDB1-212ENST00000538470 MPOP05164 745 aa8.72□□□□□ -1.01
DDB1-212ENST00000538470 TNFAIP3P21580 790 aa8.72□□□□□ -1.01
DDB1-212ENST00000538470 TGM2P21980 687 aa8.72□□□□□ -1.01
DDB1-212ENST00000538470 HK3P52790 923 aa8.72□□□□□ -1.01
DDB1-212ENST00000538470 TMPRSS3P57727 454 aa8.72□□□□□ -1.01
DDB1-212ENST00000538470 AP1S1P61966 158 aa8.72□□□□□ -1.01
DDB1-212ENST00000538470 OGDHQ02218 1023 aa8.72□□□□□ -1.01
DDB1-212ENST00000538470 TYRO3Q06418 890 aa8.72□□□□□ -1.01
DDB1-212ENST00000538470 CCDC173Q0VFZ6 552 aa8.72□□□□□ -1.01
DDB1-212ENST00000538470 MAMLD1Q13495 774 aa8.72□□□□□ -1.01
DDB1-212ENST00000538470 ELOCQ15369 112 aa8.72□□□□□ -1.01
DDB1-212ENST00000538470 CYTH1Q15438 398 aa8.72□□□□□ -1.01
DDB1-212ENST00000538470 UGP2Q16851 508 aa8.72□□□□□ -1.01
DDB1-212ENST00000538470 WSCD2Q2TBF2 565 aa8.72□□□□□ -1.01
DDB1-212ENST00000538470 LRRC73Q5JTD7 316 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms