RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 GLE1Q53GS7 698 aaKnown RBP3.62□□□□□ -1.83
PTPN22-211ENST00000538253 ANKRD20A8PQ5CZ79 823 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 ZNF805Q5CZA5 627 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 MANEALQ5VSG8 457 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 SYPL2Q5VXT5 272 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 LYSMD4Q5XG99 296 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 NCCRP1Q6ZVX7 275 aaPredicted RBP3.62□□□□□ -1.83
PTPN22-211ENST00000538253 GSTA5Q7RTV2 222 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 TMEM25Q86YD3 366 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 KIRREL3Q8IZU9 778 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 FSTL5Q8N475 847 aaPredicted RBP3.62□□□□□ -1.83
PTPN22-211ENST00000538253 HDDC3Q8N4P3 179 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 RAB42Q8N4Z0 105 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 SH2D3CQ8N5H7 860 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 EMC1Q8N766 993 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 JOSD2Q8TAC2 188 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 CALML6Q8TD86 181 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 BRSK1Q8TDC3 778 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 COL26A1Q96A83 441 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 GRAMD1AQ96CP6 724 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 FAM122AQ96E09 287 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 PIWIL1Q96J94 861 aaKnown RBP3.62□□□□□ -1.83
PTPN22-211ENST00000538253 CYP2S1Q96SQ9 504 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 SLC25A51Q9H1U9 297 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 PPCSQ9HAB8 311 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 XAB2Q9HCS7 855 aaKnown RBP3.62□□□□□ -1.83
PTPN22-211ENST00000538253 PCDH12Q9NPG4 1184 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 PHPT1Q9NRX4 125 aaPredicted RBP3.62□□□□□ -1.83
PTPN22-211ENST00000538253 ABCF3Q9NUQ8 709 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 MTRF1LQ9UGC7 380 aaKnown RBP3.62□□□□□ -1.83
PTPN22-211ENST00000538253 FAM153AQ9UHL3 310 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 APPL1Q9UKG1 709 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 HS3ST3A1Q9Y663 406 aa3.62□□□□□ -1.83
PTPN22-211ENST00000538253 MACROD2A1Z1Q3 448 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 BCLAF3A2AJT9 711 aaKnown RBP3.61□□□□□ -1.83
PTPN22-211ENST00000538253 C2orf81A6NN90 581 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 H3BMM5 538 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 CACNB4O00305 520 aaPredicted RBP3.61□□□□□ -1.83
PTPN22-211ENST00000538253 FPGTO14772 594 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 KPNA5O15131 536 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 EPHB6O15197 1021 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 MAP3K7O43318 606 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 MSI1O43347 362 aaKnown RBP3.61□□□□□ -1.83
PTPN22-211ENST00000538253 AHCYL1O43865 530 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 LZTS3O60299 673 aaPredicted RBP3.61□□□□□ -1.83
PTPN22-211ENST00000538253 ZNF254O75437 659 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 LMNAP02545 664 aaKnown RBP3.61□□□□□ -1.83
PTPN22-211ENST00000538253 FESP07332 822 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 CISD3P0C7P0 127 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 TARSP26639 723 aaKnown RBP3.61□□□□□ -1.83
PTPN22-211ENST00000538253 GRIA4P48058 902 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 PEX5P50542 639 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 CCT8P50990 548 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 PAPOLAP51003 745 aaKnown RBP3.61□□□□□ -1.83
PTPN22-211ENST00000538253 DNA2P51530 1060 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 CACNA2D1P54289 1103 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 EIF3EP60228 445 aaKnown RBP3.61□□□□□ -1.83
PTPN22-211ENST00000538253 GNG11P61952 73 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 PPIDQ08752 370 aaKnown RBP3.61□□□□□ -1.83
PTPN22-211ENST00000538253 CALCOCO2Q13137 446 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 CAMK2BQ13554 666 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 LAPTM5Q13571 262 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 CCINQ13939 588 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 STAT4Q14765 748 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 DLG2Q15700 870 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 LONRF2Q1L5Z9 754 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 PARP6Q2NL67 630 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 MYLK3Q32MK0 819 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 FAM133BQ5BKY9 247 aaKnown RBP3.61□□□□□ -1.83
PTPN22-211ENST00000538253 SLC9A4Q6AI14 798 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 FSTL4Q6MZW2 842 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 GDPD4Q6W3E5 623 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 HFE2Q6ZVN8 426 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 ERN2Q76MJ5 926 aaKnown RBP3.61□□□□□ -1.83
PTPN22-211ENST00000538253 NT5DC3Q86UY8 548 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 JAZF1Q86VZ6 243 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 RASSF3Q86WH2 238 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 TRIM69Q86WT6 500 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 GRAMD2AQ8IUY3 354 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 ZSWIM3Q96MP5 696 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 CDC6Q99741 560 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 FSD1LQ9BXM9 530 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 CACNA2D2Q9NY47 1150 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 BFARQ9NZS9 450 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 AKAP7Q9P0M2 348 aaPredicted RBP3.61□□□□□ -1.83
PTPN22-211ENST00000538253 ANAPC5Q9UJX4 755 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 PCDHGB2Q9Y5G2 931 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 PKD1L2Q7Z442 2459 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 MTCL1Q9Y4B5 1905 aaKnown RBP3.61□□□□□ -1.83
PTPN22-211ENST00000538253 A0A1B0GVG6 124 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 TCRBV21S2A2A0A5A6 115 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 UPK3BL1B0FP48 263 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 UPK3BL2E5RIL1 263 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 PRAMEF26H0Y7S4 382 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 ARNTLO00327 626 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 KPNA3O00505 521 aaPredicted RBP3.61□□□□□ -1.83
PTPN22-211ENST00000538253 KHNYNO15037 678 aaKnown RBP3.61□□□□□ -1.83
PTPN22-211ENST00000538253 HCRTO43612 131 aa3.61□□□□□ -1.83
PTPN22-211ENST00000538253 BUB1BO60566 1050 aaPredicted RBP3.61□□□□□ -1.83
PTPN22-211ENST00000538253 SPAG6O75602 509 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms