RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 KDELC1Q6UW63 502 aa13.2□□□□□ -0.3
CHFR-216ENST00000538235 NYAP1Q6ZVC0 841 aa13.2□□□□□ -0.3
CHFR-216ENST00000538235 PRELID2Q8N945 189 aa13.2□□□□□ -0.3
CHFR-216ENST00000538235 CCDC110Q8TBZ0 833 aa13.2□□□□□ -0.3
CHFR-216ENST00000538235 PIH1D2Q8WWB5 315 aa13.2□□□□□ -0.3
CHFR-216ENST00000538235 HTR3CQ8WXA8 447 aa13.2□□□□□ -0.3
CHFR-216ENST00000538235 NKD2Q969F2 451 aaPredicted RBP13.2□□□□□ -0.3
CHFR-216ENST00000538235 IMP4Q96G21 291 aaKnown RBP13.2□□□□□ -0.3
CHFR-216ENST00000538235 LRIG1Q96JA1 1093 aa13.2□□□□□ -0.3
CHFR-216ENST00000538235 TEKT5Q96M29 485 aa13.2□□□□□ -0.3
CHFR-216ENST00000538235 TUBGCP5Q96RT8 1024 aa13.2□□□□□ -0.3
CHFR-216ENST00000538235 OSBPL9Q96SU4 736 aa13.2□□□□□ -0.3
CHFR-216ENST00000538235 RBM15Q96T37 977 aaKnown RBP eCLIP13.2□□□□□ -0.3
CHFR-216ENST00000538235 POLR1EQ9GZS1 481 aaKnown RBP13.2□□□□□ -0.3
CHFR-216ENST00000538235 ARRDC1-AS1Q9H2J1 176 aa13.2□□□□□ -0.3
CHFR-216ENST00000538235 SGK2Q9HBY8 427 aa13.2□□□□□ -0.3
CHFR-216ENST00000538235 GLOD4Q9HC38 313 aa13.2□□□□□ -0.3
CHFR-216ENST00000538235 FZD3Q9NPG1 666 aa13.2□□□□□ -0.3
CHFR-216ENST00000538235 PCDH12Q9NPG4 1184 aa13.2□□□□□ -0.3
CHFR-216ENST00000538235 SCUBE2Q9NQ36 999 aa13.2□□□□□ -0.3
CHFR-216ENST00000538235 UBP1Q9NZI7 540 aa13.2□□□□□ -0.3
CHFR-216ENST00000538235 DKK3Q9UBP4 350 aa13.2□□□□□ -0.3
CHFR-216ENST00000538235 JRKLQ9Y4A0 524 aa13.2□□□□□ -0.3
CHFR-216ENST00000538235 TDRD6O60522 2096 aaKnown RBP13.2□□□□□ -0.3
CHFR-216ENST00000538235 UPK3BL1B0FP48 263 aa13.19□□□□□ -0.3
CHFR-216ENST00000538235 UPK3BL2E5RIL1 263 aa13.19□□□□□ -0.3
CHFR-216ENST00000538235 H7C0C1 242 aa13.19□□□□□ -0.3
CHFR-216ENST00000538235 SLC7A4O43246 635 aa13.19□□□□□ -0.3
CHFR-216ENST00000538235 CEP104O60308 925 aa13.19□□□□□ -0.3
CHFR-216ENST00000538235 RNGTTO60942 597 aaKnown RBP13.19□□□□□ -0.3
CHFR-216ENST00000538235 TJP3O95049 919 aa13.19□□□□□ -0.3
CHFR-216ENST00000538235 PGLSO95336 258 aa13.19□□□□□ -0.3
CHFR-216ENST00000538235 LMNAP02545 664 aaKnown RBP13.19□□□□□ -0.3
CHFR-216ENST00000538235 FGGP02679 453 aa13.19□□□□□ -0.3
CHFR-216ENST00000538235 WNT1P04628 370 aa13.19□□□□□ -0.3
CHFR-216ENST00000538235 ALPIP09923 528 aa13.19□□□□□ -0.3
CHFR-216ENST00000538235 ETS1P14921 441 aa13.19□□□□□ -0.3
CHFR-216ENST00000538235 PRLRP16471 622 aa13.19□□□□□ -0.3
CHFR-216ENST00000538235 HSPA9P38646 679 aaKnown RBP13.19□□□□□ -0.3
CHFR-216ENST00000538235 ATP5OP48047 213 aa13.19□□□□□ -0.3
CHFR-216ENST00000538235 RENBPP51606 427 aa13.19□□□□□ -0.3
CHFR-216ENST00000538235 ZNF284Q2VY69 593 aa13.19□□□□□ -0.3
CHFR-216ENST00000538235 FAM46CQ5VWP2 391 aa13.19□□□□□ -0.3
CHFR-216ENST00000538235 LYSMD4Q5XG99 296 aa13.19□□□□□ -0.3
CHFR-216ENST00000538235 LAIR1Q6GTX8 287 aa13.19□□□□□ -0.3
CHFR-216ENST00000538235 TTC27Q6P3X3 843 aa13.19□□□□□ -0.3
CHFR-216ENST00000538235 RFLNAQ6ZTI6 216 aa13.19□□□□□ -0.3
CHFR-216ENST00000538235 LPCAT2Q7L5N7 544 aa13.19□□□□□ -0.3
CHFR-216ENST00000538235 TSPAN33Q86UF1 283 aa13.19□□□□□ -0.3
CHFR-216ENST00000538235 PELI3Q8N2H9 469 aa13.19□□□□□ -0.3
CHFR-216ENST00000538235 ZCCHC9Q8N567 271 aaKnown RBP13.19□□□□□ -0.3
CHFR-216ENST00000538235 OR2T34Q8NGX1 318 aa13.19□□□□□ -0.3
CHFR-216ENST00000538235 DNASE2BQ8WZ79 361 aa13.19□□□□□ -0.3
CHFR-216ENST00000538235 SPOCK2Q92563 424 aa13.19□□□□□ -0.3
CHFR-216ENST00000538235 SLC6A18Q96N87 628 aa13.19□□□□□ -0.3
CHFR-216ENST00000538235 MYOCQ99972 504 aa13.19□□□□□ -0.3
CHFR-216ENST00000538235 TMEM121Q9BTD3 319 aa13.19□□□□□ -0.3
CHFR-216ENST00000538235 OSBPL1AQ9BXW6 950 aa13.19□□□□□ -0.3
CHFR-216ENST00000538235 EIF2B4Q9UI10 523 aaKnown RBP13.19□□□□□ -0.3
CHFR-216ENST00000538235 PILRBQ9UKJ0 227 aa13.19□□□□□ -0.3
CHFR-216ENST00000538235 SNX12Q9UMY4 172 aa13.19□□□□□ -0.3
CHFR-216ENST00000538235 CHKBQ9Y259 395 aa13.19□□□□□ -0.3
CHFR-216ENST00000538235 COQ6Q9Y2Z9 468 aa13.19□□□□□ -0.3
CHFR-216ENST00000538235 RAI2Q9Y5P3 530 aa13.19□□□□□ -0.3
CHFR-216ENST00000538235 CFAP54Q96N23 3096 aa13.19□□□□□ -0.3
CHFR-216ENST00000538235 A0A1W2PQU0 124 aa13.18□□□□□ -0.3
CHFR-216ENST00000538235 NPIPB15A6NHN6 443 aaPredicted RBP13.18□□□□□ -0.3
CHFR-216ENST00000538235 A8MX80 341 aa13.18□□□□□ -0.3
CHFR-216ENST00000538235 HACD1B0YJ81 288 aa13.18□□□□□ -0.3
CHFR-216ENST00000538235 PDE2AO00408 941 aaPredicted RBP13.18□□□□□ -0.3
CHFR-216ENST00000538235 RIOK3O14730 519 aaKnown RBP13.18□□□□□ -0.3
CHFR-216ENST00000538235 KCNN4O15554 427 aa13.18□□□□□ -0.3
CHFR-216ENST00000538235 KIF5CO60282 957 aa13.18□□□□□ -0.3
CHFR-216ENST00000538235 SOCS5O75159 536 aa13.18□□□□□ -0.3
CHFR-216ENST00000538235 FSBPO95073 299 aa13.18□□□□□ -0.3
CHFR-216ENST00000538235 CTPS1P17812 591 aa13.18□□□□□ -0.3
CHFR-216ENST00000538235 PSMB4P28070 264 aa13.18□□□□□ -0.3
CHFR-216ENST00000538235 OXTRP30559 389 aa13.18□□□□□ -0.3
CHFR-216ENST00000538235 PLA2G5P39877 138 aa13.18□□□□□ -0.3
CHFR-216ENST00000538235 MPLP40238 635 aa13.18□□□□□ -0.3
CHFR-216ENST00000538235 CHRNA4P43681 627 aa13.18□□□□□ -0.3
CHFR-216ENST00000538235 GNG11P61952 73 aa13.18□□□□□ -0.3
CHFR-216ENST00000538235 CREB5Q02930 508 aa13.18□□□□□ -0.3
CHFR-216ENST00000538235 BCL2L1Q07817 233 aa13.18□□□□□ -0.3
CHFR-216ENST00000538235 ITKQ08881 620 aa13.18□□□□□ -0.3
CHFR-216ENST00000538235 SPEM2Q0P670 501 aa13.18□□□□□ -0.3
CHFR-216ENST00000538235 SNX1Q13596 522 aa13.18□□□□□ -0.3
CHFR-216ENST00000538235 SF3A2Q15428 464 aaKnown RBP13.18□□□□□ -0.3
CHFR-216ENST00000538235 UGP2Q16851 508 aa13.18□□□□□ -0.3
CHFR-216ENST00000538235 TPRG1LQ5T0D9 272 aa13.18□□□□□ -0.3
CHFR-216ENST00000538235 FAXCQ5TGI0 409 aa13.18□□□□□ -0.3
CHFR-216ENST00000538235 CCDC181Q5TID7 509 aa13.18□□□□□ -0.3
CHFR-216ENST00000538235 SLC36A4Q6YBV0 504 aa13.18□□□□□ -0.3
CHFR-216ENST00000538235 TRIM69Q86WT6 500 aa13.18□□□□□ -0.3
CHFR-216ENST00000538235 CDKL3Q8IVW4 592 aaPredicted RBP13.18□□□□□ -0.3
CHFR-216ENST00000538235 KLHDC8BQ8IXV7 354 aa13.18□□□□□ -0.3
CHFR-216ENST00000538235 TAB3Q8N5C8 712 aaPredicted RBP13.18□□□□□ -0.3
CHFR-216ENST00000538235 FAM71DQ8N9W8 422 aa13.18□□□□□ -0.3
CHFR-216ENST00000538235 OR2I1PQ8NGU4 316 aa13.18□□□□□ -0.3
CHFR-216ENST00000538235 KLF6Q99612 283 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms