RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 HGSO14964 777 aaPredicted RBP11.26□□□□□ -0.61
CLPB-208ENST00000538021 CAPN5O15484 640 aaPredicted RBP11.26□□□□□ -0.61
CLPB-208ENST00000538021 THAP12O43422 761 aa11.26□□□□□ -0.61
CLPB-208ENST00000538021 NUDT21O43809 227 aaKnown RBP11.26□□□□□ -0.61
CLPB-208ENST00000538021 NR1D1P20393 614 aa11.26□□□□□ -0.61
CLPB-208ENST00000538021 GNLYP22749 145 aa11.26□□□□□ -0.61
CLPB-208ENST00000538021 CMA1P23946 247 aa11.26□□□□□ -0.61
CLPB-208ENST00000538021 ALDH4A1P30038 563 aa11.26□□□□□ -0.61
CLPB-208ENST00000538021 B4GALNT1Q00973 533 aa11.26□□□□□ -0.61
CLPB-208ENST00000538021 GCNT1Q02742 428 aa11.26□□□□□ -0.61
CLPB-208ENST00000538021 CETN1Q12798 172 aa11.26□□□□□ -0.61
CLPB-208ENST00000538021 CDC20Q12834 499 aa11.26□□□□□ -0.61
CLPB-208ENST00000538021 SEPT6Q14141 434 aa11.26□□□□□ -0.61
CLPB-208ENST00000538021 HLTFQ14527 1009 aaKnown RBP eCLIP11.26□□□□□ -0.61
CLPB-208ENST00000538021 POLD3Q15054 466 aaPredicted RBP11.26□□□□□ -0.61
CLPB-208ENST00000538021 KCTD16Q68DU8 428 aa11.26□□□□□ -0.61
CLPB-208ENST00000538021 ZNF783Q6ZMS7 281 aa11.26□□□□□ -0.61
CLPB-208ENST00000538021 ZNF683Q8IZ20 524 aa11.26□□□□□ -0.61
CLPB-208ENST00000538021 CCDC112Q8NEF3 446 aa11.26□□□□□ -0.61
CLPB-208ENST00000538021 APOBEC4Q8WW27 367 aaKnown RBP11.26□□□□□ -0.61
CLPB-208ENST00000538021 ART4Q93070 314 aa11.26□□□□□ -0.61
CLPB-208ENST00000538021 KIAA1143Q96AT1 154 aaPredicted RBP11.26□□□□□ -0.61
CLPB-208ENST00000538021 PDXPQ96GD0 296 aa11.26□□□□□ -0.61
CLPB-208ENST00000538021 SLC45A3Q96JT2 553 aa11.26□□□□□ -0.61
CLPB-208ENST00000538021 CCDC74BQ96LY2 380 aa11.26□□□□□ -0.61
CLPB-208ENST00000538021 NUDT22Q9BRQ3 303 aa11.26□□□□□ -0.61
CLPB-208ENST00000538021 APOOQ9BUR5 198 aa11.26□□□□□ -0.61
CLPB-208ENST00000538021 OSBPL1AQ9BXW6 950 aa11.26□□□□□ -0.61
CLPB-208ENST00000538021 GPN2Q9H9Y4 310 aaPredicted RBP11.26□□□□□ -0.61
CLPB-208ENST00000538021 ACP6Q9NPH0 428 aa11.26□□□□□ -0.61
CLPB-208ENST00000538021 PIGVQ9NUD9 493 aa11.26□□□□□ -0.61
CLPB-208ENST00000538021 ASNSD1Q9NWL6 643 aa11.26□□□□□ -0.61
CLPB-208ENST00000538021 ARHGEF38Q9NXL2 777 aa11.26□□□□□ -0.61
CLPB-208ENST00000538021 SLC39A1Q9NY26 324 aa11.26□□□□□ -0.61
CLPB-208ENST00000538021 HPSEQ9Y251 543 aa11.26□□□□□ -0.61
CLPB-208ENST00000538021 TP53TG5Q9Y2B4 290 aa11.26□□□□□ -0.61
CLPB-208ENST00000538021 CHD5Q8TDI0 1954 aa11.26□□□□□ -0.61
CLPB-208ENST00000538021 CRYBG3Q68DQ2 2970 aa11.26□□□□□ -0.61
CLPB-208ENST00000538021 CSMD1Q96PZ7 3565 aa11.26□□□□□ -0.61
CLPB-208ENST00000538021 CENPEQ02224 2701 aa11.25□□□□□ -0.61
CLPB-208ENST00000538021 IGHV5-10-1A0A0J9YXX1 117 aa11.25□□□□□ -0.61
CLPB-208ENST00000538021 EFCAB7A8K855 629 aa11.25□□□□□ -0.61
CLPB-208ENST00000538021 I6L893 689 aaPredicted RBP11.25□□□□□ -0.61
CLPB-208ENST00000538021 B4GAT1O43505 415 aa11.25□□□□□ -0.61
CLPB-208ENST00000538021 POP4O95707 220 aaKnown RBP11.25□□□□□ -0.61
CLPB-208ENST00000538021 CD160O95971 181 aa11.25□□□□□ -0.61
CLPB-208ENST00000538021 PCCBP05166 539 aa11.25□□□□□ -0.61
CLPB-208ENST00000538021 XPAP23025 273 aaPredicted RBP11.25□□□□□ -0.61
CLPB-208ENST00000538021 OAS2P29728 719 aaKnown RBP11.25□□□□□ -0.61
CLPB-208ENST00000538021 GNA15P30679 374 aa11.25□□□□□ -0.61
CLPB-208ENST00000538021 CSTF2P33240 577 aaKnown RBP eCLIP11.25□□□□□ -0.61
CLPB-208ENST00000538021 SNRPD1P62314 119 aaKnown RBP11.25□□□□□ -0.61
CLPB-208ENST00000538021 GNA12Q03113 381 aa11.25□□□□□ -0.61
CLPB-208ENST00000538021 DNM1Q05193 864 aaKnown RBP11.25□□□□□ -0.61
CLPB-208ENST00000538021 INPP5AQ14642 412 aa11.25□□□□□ -0.61
CLPB-208ENST00000538021 WSCD2Q2TBF2 565 aa11.25□□□□□ -0.61
CLPB-208ENST00000538021 MYLK3Q32MK0 819 aa11.25□□□□□ -0.61
CLPB-208ENST00000538021 BRMS1LQ5PSV4 323 aa11.25□□□□□ -0.61
CLPB-208ENST00000538021 SPECC1LQ69YQ0 1117 aa11.25□□□□□ -0.61
CLPB-208ENST00000538021 ANKRD40Q6AI12 368 aa11.25□□□□□ -0.61
CLPB-208ENST00000538021 ZNF787Q6DD87 383 aa11.25□□□□□ -0.61
CLPB-208ENST00000538021 C16orf46Q6P387 395 aa11.25□□□□□ -0.61
CLPB-208ENST00000538021 OGFOD3Q6PK18 319 aa11.25□□□□□ -0.61
CLPB-208ENST00000538021 GDPD4Q6W3E5 623 aa11.25□□□□□ -0.61
CLPB-208ENST00000538021 FAM183BPQ6ZVS7 135 aa11.25□□□□□ -0.61
CLPB-208ENST00000538021 IRF2BP1Q8IU81 584 aa11.25□□□□□ -0.61
CLPB-208ENST00000538021 DRC7Q8IY82 874 aa11.25□□□□□ -0.61
CLPB-208ENST00000538021 NRSN1Q8IZ57 195 aa11.25□□□□□ -0.61
CLPB-208ENST00000538021 UNC5BQ8IZJ1 945 aa11.25□□□□□ -0.61
CLPB-208ENST00000538021 EFCAB3Q8N7B9 438 aa11.25□□□□□ -0.61
CLPB-208ENST00000538021 OR2AP1Q8NGE2 309 aa11.25□□□□□ -0.61
CLPB-208ENST00000538021 KREMEN1Q96MU8 473 aa11.25□□□□□ -0.61
CLPB-208ENST00000538021 WDR92Q96MX6 357 aa11.25□□□□□ -0.61
CLPB-208ENST00000538021 HAPLN3Q96S86 360 aa11.25□□□□□ -0.61
CLPB-208ENST00000538021 CPXM1Q96SM3 734 aa11.25□□□□□ -0.61
CLPB-208ENST00000538021 MRPL40Q9NQ50 206 aaKnown RBP11.25□□□□□ -0.61
CLPB-208ENST00000538021 RCOR1Q9UKL0 485 aa11.25□□□□□ -0.61
CLPB-208ENST00000538021 CELSR2Q9HCU4 2923 aa11.25□□□□□ -0.61
CLPB-208ENST00000538021 TRIM49BA6NDI0 452 aa11.24□□□□□ -0.61
CLPB-208ENST00000538021 RHPN2P1A8MT19 583 aa11.24□□□□□ -0.61
CLPB-208ENST00000538021 DAB1O75553 588 aa11.24□□□□□ -0.61
CLPB-208ENST00000538021 GSRP00390 522 aa11.24□□□□□ -0.61
CLPB-208ENST00000538021 F13A1P00488 732 aa11.24□□□□□ -0.61
CLPB-208ENST00000538021 ZSCAN22P10073 491 aaPredicted RBP11.24□□□□□ -0.61
CLPB-208ENST00000538021 MPSTP25325 297 aa11.24□□□□□ -0.61
CLPB-208ENST00000538021 COL8A1P27658 744 aa11.24□□□□□ -0.61
CLPB-208ENST00000538021 ACVRL1P37023 503 aa11.24□□□□□ -0.61
CLPB-208ENST00000538021 PRCPP42785 496 aa11.24□□□□□ -0.61
CLPB-208ENST00000538021 CXCR3P49682 368 aa11.24□□□□□ -0.61
CLPB-208ENST00000538021 SULT1E1P49888 294 aa11.24□□□□□ -0.61
CLPB-208ENST00000538021 NDUFA8P51970 172 aa11.24□□□□□ -0.61
CLPB-208ENST00000538021 PMS1P54277 932 aaKnown RBP11.24□□□□□ -0.61
CLPB-208ENST00000538021 MAZP56270 477 aaKnown RBP11.24□□□□□ -0.61
CLPB-208ENST00000538021 RNASE9P60153 205 aaKnown RBP11.24□□□□□ -0.61
CLPB-208ENST00000538021 DEUP1Q05D60 604 aa11.24□□□□□ -0.61
CLPB-208ENST00000538021 BIRC2Q13490 618 aa11.24□□□□□ -0.61
CLPB-208ENST00000538021 MEA1Q16626 185 aa11.24□□□□□ -0.61
CLPB-208ENST00000538021 ATXN7L2Q5T6C5 722 aaPredicted RBP11.24□□□□□ -0.61
CLPB-208ENST00000538021 DCAF12Q5T6F0 453 aa11.24□□□□□ -0.61
CLPB-208ENST00000538021 ATP1A1-AS1Q5TC04 95 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms