RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 NODALQ96S42 347 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 SLC39A1Q9NY26 324 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 SNTG2Q9NY99 539 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 C3orf18Q9UK00 162 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 TBX20Q9UMR3 447 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 MYO16Q9Y6X6 1858 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 TRDMT1O14717 391 aaKnown RBP5.7□□□□□ -1.5
CSMD1-215ENST00000537824 OR5F1O95221 314 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 ZSCAN5DPP0CG00 497 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 ITGB6P18564 788 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 MPSTP25325 297 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 HOXD12P35452 270 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 MPP2Q14168 576 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 ZNF268Q14587 947 aaPredicted RBP5.7□□□□□ -1.5
CSMD1-215ENST00000537824 OGFRL1Q5TC84 451 aaPredicted RBP5.7□□□□□ -1.5
CSMD1-215ENST00000537824 OVOS1Q6IE37 1185 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 CXorf57Q6NSI4 855 aaKnown RBP5.7□□□□□ -1.5
CSMD1-215ENST00000537824 SCIMPQ6UWF3 145 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 PRELID2Q8N945 189 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 PIGKQ92643 395 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 CADM1Q9BY67 442 aaKnown RBP5.7□□□□□ -1.5
CSMD1-215ENST00000537824 PPM1HQ9ULR3 514 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 IFRD1O00458 451 aaPredicted RBP5.7□□□□□ -1.5
CSMD1-215ENST00000537824 PLOD2O00469 737 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 KPNA3O00505 521 aaPredicted RBP5.7□□□□□ -1.5
CSMD1-215ENST00000537824 NAGLUP54802 743 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 RAB2AP61019 212 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 MRNIPQ6NTE8 343 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 UGT3A1Q6NUS8 523 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 CXXC5Q7LFL8 322 aaKnown RBP5.7□□□□□ -1.5
CSMD1-215ENST00000537824 CINPQ9BW66 212 aaPredicted RBP5.7□□□□□ -1.5
CSMD1-215ENST00000537824 MUC3BQ9H195 1237 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 MAN1C1Q9NR34 630 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 TBC1D22BQ9NU19 505 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 PIK3CGP48736 1102 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 CDK9P50750 372 aaKnown RBP5.7□□□□□ -1.5
CSMD1-215ENST00000537824 SCARF1Q14162 830 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 CBWD2Q8IUF1 395 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 TRIM43Q96BQ3 446 aaPredicted RBP5.7□□□□□ -1.5
CSMD1-215ENST00000537824 KAT8Q9H7Z6 458 aaKnown RBP5.7□□□□□ -1.5
CSMD1-215ENST00000537824 SLAIN2Q9P270 581 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 PRG2P13727 222 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 HIST2H2ACQ16777 129 aaPredicted RBP5.7□□□□□ -1.5
CSMD1-215ENST00000537824 ACSBG2Q5FVE4 666 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 HIST2H2AA3Q6FI13 130 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 ASCC1Q8N9N2 400 aaKnown RBP5.7□□□□□ -1.5
CSMD1-215ENST00000537824 C12orf50Q8NA57 414 aaPredicted RBP5.7□□□□□ -1.5
CSMD1-215ENST00000537824 TRPV3Q8NET8 790 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 PHF10Q8WUB8 498 aaKnown RBP5.7□□□□□ -1.5
CSMD1-215ENST00000537824 GAL3ST3Q96A11 431 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 CRELD1Q96HD1 420 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 MIR1-1HGQ9H1L0 117 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 DCP1AQ9NPI6 582 aaPredicted RBP5.7□□□□□ -1.5
CSMD1-215ENST00000537824 TOPORSQ9NS56 1045 aaPredicted RBP5.7□□□□□ -1.5
CSMD1-215ENST00000537824 USF3Q68DE3 2245 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 IRF6O14896 467 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 PEX11AO75192 247 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 TBX10O75333 385 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 LRIG2O94898 1065 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 RPL35P42766 123 aaKnown RBP5.7□□□□□ -1.5
CSMD1-215ENST00000537824 ERAP2Q6P179 960 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 ILDR1Q86SU0 546 aaPredicted RBP5.7□□□□□ -1.5
CSMD1-215ENST00000537824 PLEKHO2Q8TD55 490 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 PFDN5Q99471 154 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 AIFM2Q9BRQ8 373 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 PAK6Q9NQU5 681 aaPredicted RBP5.7□□□□□ -1.5
CSMD1-215ENST00000537824 POLE4Q9NR33 117 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 CHST7Q9NS84 486 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 MED11Q9P086 117 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 ZMYM5Q9UJ78 669 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 UBQLN1Q9UMX0 589 aaKnown RBP5.7□□□□□ -1.5
CSMD1-215ENST00000537824 A0A087X1B8 175 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 OR2AT4A6NND4 320 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 BTBD19C9JJ37 291 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 ZW10O43264 779 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 SGTAO43765 313 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 AIREO43918 545 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 DARSP14868 501 aaKnown RBP5.7□□□□□ -1.5
CSMD1-215ENST00000537824 EFNA5P52803 228 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 CDH13P55290 713 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 TBRG1Q3YBR2 411 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 ATP13A4Q4VNC1 1196 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 TMEM214Q6NUQ4 689 aaKnown RBP5.7□□□□□ -1.5
CSMD1-215ENST00000537824 C10orf107Q8IVU9 208 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 SPERTQ8NA61 448 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 SLC37A3Q8NCC5 494 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 KIAA0895Q8NCT3 520 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 CBWD1Q9BRT8 395 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 SCUBE2Q9NQ36 999 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 B3GALNT1O75752 331 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 ZNF432O94892 652 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 ENTPD1P49961 510 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 DCDC1P59894 354 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 WSCD2Q2TBF2 565 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 RALGPS2Q86X27 583 aaPredicted RBP5.7□□□□□ -1.5
CSMD1-215ENST00000537824 ZNF431Q8TF32 576 aaPredicted RBP5.7□□□□□ -1.5
CSMD1-215ENST00000537824 GPD2P43304 727 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 OMPP47874 163 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 FXR2P51116 673 aaKnown RBP eCLIP5.7□□□□□ -1.5
CSMD1-215ENST00000537824 GEMP55040 296 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms