RNA–Protein interactions for RNA: ENST00000537642.1

USP28-204, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 732 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-204ENST00000537642 SUOXP51687 545 aa14.93□□□□□ -0.02
USP28-204ENST00000537642 MESDQ14696 234 aa14.93□□□□□ -0.02
USP28-204ENST00000537642 PDK2Q15119 407 aa14.93□□□□□ -0.02
USP28-204ENST00000537642 UGP2Q16851 508 aa14.93□□□□□ -0.02
USP28-204ENST00000537642 TMEM52BQ4KMG9 183 aa14.93□□□□□ -0.02
USP28-204ENST00000537642 NCBP2-AS2Q69YL0 99 aa14.93□□□□□ -0.02
USP28-204ENST00000537642 BRAT1Q6PJG6 821 aa14.93□□□□□ -0.02
USP28-204ENST00000537642 KDM7AQ6ZMT4 941 aa14.93□□□□□ -0.02
USP28-204ENST00000537642 PGBD5Q8N414 524 aa14.93□□□□□ -0.02
USP28-204ENST00000537642 ATPAF2Q8N5M1 289 aa14.93□□□□□ -0.02
USP28-204ENST00000537642 KCTD6Q8NC69 237 aa14.93□□□□□ -0.02
USP28-204ENST00000537642 DENND6BQ8NEG7 585 aa14.93□□□□□ -0.02
USP28-204ENST00000537642 PCDH19Q8TAB3 1148 aa14.93□□□□□ -0.02
USP28-204ENST00000537642 CXorf40AQ8TE69 158 aa14.93□□□□□ -0.02
USP28-204ENST00000537642 CENPTQ96BT3 561 aa14.93□□□□□ -0.02
USP28-204ENST00000537642 ECHDC3Q96DC8 303 aa14.93□□□□□ -0.02
USP28-204ENST00000537642 ZNF670Q9BS34 389 aa14.93□□□□□ -0.02
USP28-204ENST00000537642 WRAP53Q9BUR4 548 aaKnown RBP14.93□□□□□ -0.02
USP28-204ENST00000537642 ATP13A3Q9H7F0 1226 aa14.93□□□□□ -0.02
USP28-204ENST00000537642 PCDH12Q9NPG4 1184 aa14.93□□□□□ -0.02
USP28-204ENST00000537642 FTSJ1Q9UET6 329 aa14.93□□□□□ -0.02
USP28-204ENST00000537642 KLK13Q9UKR3 277 aa14.93□□□□□ -0.02
USP28-204ENST00000537642 TTC24A2A3L6 582 aaPredicted RBP14.92□□□□□ -0.02
USP28-204ENST00000537642 GOLGA8CPA6NN73 597 aa14.92□□□□□ -0.02
USP28-204ENST00000537642 RIOK3O14730 519 aaKnown RBP14.92□□□□□ -0.02
USP28-204ENST00000537642 FPGTO14772 594 aa14.92□□□□□ -0.02
USP28-204ENST00000537642 SDC3O75056 442 aa14.92□□□□□ -0.02
USP28-204ENST00000537642 TM7SF2O76062 418 aa14.92□□□□□ -0.02
USP28-204ENST00000537642 PRKCGP05129 697 aa14.92□□□□□ -0.02
USP28-204ENST00000537642 KRT7P08729 469 aa14.92□□□□□ -0.02
USP28-204ENST00000537642 CR2P20023 1033 aa14.92□□□□□ -0.02
USP28-204ENST00000537642 XPAP23025 273 aaPredicted RBP14.92□□□□□ -0.02
USP28-204ENST00000537642 SERPINA4P29622 427 aa14.92□□□□□ -0.02
USP28-204ENST00000537642 SCNN1BP51168 640 aa14.92□□□□□ -0.02
USP28-204ENST00000537642 RENBPP51606 427 aa14.92□□□□□ -0.02
USP28-204ENST00000537642 AP1S1P61966 158 aa14.92□□□□□ -0.02
USP28-204ENST00000537642 BCL2L1Q07817 233 aa14.92□□□□□ -0.02
USP28-204ENST00000537642 ELP6Q0PNE2 266 aa14.92□□□□□ -0.02
USP28-204ENST00000537642 ZNF235Q14590 738 aa14.92□□□□□ -0.02
USP28-204ENST00000537642 PAFAH1B3Q15102 231 aaKnown RBP14.92□□□□□ -0.02
USP28-204ENST00000537642 ANKRD20A8PQ5CZ79 823 aa14.92□□□□□ -0.02
USP28-204ENST00000537642 CFAP58Q5T655 872 aa14.92□□□□□ -0.02
USP28-204ENST00000537642 DCP2Q8IU60 420 aaKnown RBP14.92□□□□□ -0.02
USP28-204ENST00000537642 RHOT2Q8IXI1 618 aa14.92□□□□□ -0.02
USP28-204ENST00000537642 EID2Q8N6I1 236 aa14.92□□□□□ -0.02
USP28-204ENST00000537642 RFFLQ8WZ73 363 aa14.92□□□□□ -0.02
USP28-204ENST00000537642 FAF2Q96CS3 445 aa14.92□□□□□ -0.02
USP28-204ENST00000537642 ATP8A1Q9Y2Q0 1164 aa14.92□□□□□ -0.02
USP28-204ENST00000537642 COQ6Q9Y2Z9 468 aa14.92□□□□□ -0.02
USP28-204ENST00000537642 NEUROG3Q9Y4Z2 214 aa14.92□□□□□ -0.02
USP28-204ENST00000537642 PLXNB3Q9ULL4 1909 aa14.92□□□□□ -0.02
USP28-204ENST00000537642 FAM221BA6H8Z2 402 aa14.91□□□□□ -0.02
USP28-204ENST00000537642 TRAFD1O14545 582 aaPredicted RBP14.91□□□□□ -0.02
USP28-204ENST00000537642 LDOC1O95751 146 aaPredicted RBP14.91□□□□□ -0.02
USP28-204ENST00000537642 KDELR1P24390 212 aa14.91□□□□□ -0.02
USP28-204ENST00000537642 IGFALSP35858 605 aa14.91□□□□□ -0.02
USP28-204ENST00000537642 HSPA9P38646 679 aaKnown RBP14.91□□□□□ -0.02
USP28-204ENST00000537642 MMP12P39900 470 aa14.91□□□□□ -0.02
USP28-204ENST00000537642 ARHGAP25P42331 645 aa14.91□□□□□ -0.02
USP28-204ENST00000537642 RABIFP47224 123 aa14.91□□□□□ -0.02
USP28-204ENST00000537642 ZNF75DP51815 510 aa14.91□□□□□ -0.02
USP28-204ENST00000537642 PFN3P60673 137 aa14.91□□□□□ -0.02
USP28-204ENST00000537642 SEMG2Q02383 582 aa14.91□□□□□ -0.02
USP28-204ENST00000537642 GALNT2Q10471 571 aa14.91□□□□□ -0.02
USP28-204ENST00000537642 FZD2Q14332 565 aa14.91□□□□□ -0.02
USP28-204ENST00000537642 TPRG1LQ5T0D9 272 aa14.91□□□□□ -0.02
USP28-204ENST00000537642 GAS2L3Q86XJ1 694 aa14.91□□□□□ -0.02
USP28-204ENST00000537642 LRRC49Q8IUZ0 686 aa14.91□□□□□ -0.02
USP28-204ENST00000537642 SLC25A45Q8N413 288 aa14.91□□□□□ -0.02
USP28-204ENST00000537642 PQLC3Q8N755 202 aa14.91□□□□□ -0.02
USP28-204ENST00000537642 TP53I13Q8NBR0 393 aaPredicted RBP14.91□□□□□ -0.02
USP28-204ENST00000537642 RAPGEF5Q92565 580 aa14.91□□□□□ -0.02
USP28-204ENST00000537642 IFT43Q96FT9 208 aa14.91□□□□□ -0.02
USP28-204ENST00000537642 CNDP2Q96KP4 475 aaKnown RBP14.91□□□□□ -0.02
USP28-204ENST00000537642 MGME1Q9BQP7 344 aa14.91□□□□□ -0.02
USP28-204ENST00000537642 TMEM121BQ9BXQ6 578 aaPredicted RBP14.91□□□□□ -0.02
USP28-204ENST00000537642 MBNL1Q9NR56 388 aaKnown RBP14.91□□□□□ -0.02
USP28-204ENST00000537642 UCKL1Q9NWZ5 548 aa14.91□□□□□ -0.02
USP28-204ENST00000537642 INTUQ9ULD6 942 aa14.91□□□□□ -0.02
USP28-204ENST00000537642 MSRB2Q9Y3D2 182 aa14.91□□□□□ -0.02
USP28-204ENST00000537642 FRYQ5TBA9 3013 aa14.91□□□□□ -0.02
USP28-204ENST00000537642 ASPMQ8IZT6 3477 aa14.91□□□□□ -0.02
USP28-204ENST00000537642 GOLGA4Q13439 2230 aaKnown RBP14.9□□□□□ -0.02
USP28-204ENST00000537642 SPTY2D1-AS1A0A0U1RR47 76 aa14.9□□□□□ -0.02
USP28-204ENST00000537642 C1QTNF9BB2RNN3 333 aa14.9□□□□□ -0.02
USP28-204ENST00000537642 ENC1O14682 589 aa14.9□□□□□ -0.02
USP28-204ENST00000537642 MAP3K6O95382 1288 aa14.9□□□□□ -0.02
USP28-204ENST00000537642 C1QTNF9P0C862 333 aa14.9□□□□□ -0.02
USP28-204ENST00000537642 C6P13671 934 aa14.9□□□□□ -0.02
USP28-204ENST00000537642 DGKAP23743 735 aa14.9□□□□□ -0.02
USP28-204ENST00000537642 GARSP41250 739 aaKnown RBP14.9□□□□□ -0.02
USP28-204ENST00000537642 MAXP61244 160 aa14.9□□□□□ -0.02
USP28-204ENST00000537642 TCEAL1Q15170 157 aa14.9□□□□□ -0.02
USP28-204ENST00000537642 ZNF542PQ5EBM4 170 aa14.9□□□□□ -0.02
USP28-204ENST00000537642 MARC1Q5VT66 337 aa14.9□□□□□ -0.02
USP28-204ENST00000537642 ERAP2Q6P179 960 aa14.9□□□□□ -0.02
USP28-204ENST00000537642 MAP7D3Q8IWC1 876 aa14.9□□□□□ -0.02
USP28-204ENST00000537642 TEX26Q8N6G2 289 aa14.9□□□□□ -0.02
USP28-204ENST00000537642 NSMCE1Q8WV22 266 aa14.9□□□□□ -0.02
USP28-204ENST00000537642 GATA6Q92908 595 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms