RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 DDIASQ8IXT1 998 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 METTL4Q8N3J2 472 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 MCFD2Q8NI22 146 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 DYNC2LI1Q8TCX1 351 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 TMC2Q8TDI7 906 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 ZNF578Q96N58 590 aaPredicted RBP8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 CPXM1Q96SM3 734 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 ACO2Q99798 780 aaKnown RBP8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 MMP27Q9H306 513 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 PRDM8Q9NQV8 689 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 AGPAT4Q9NRZ5 378 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 AGPAT3Q9NRZ7 376 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 DCAF16Q9NXF7 216 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 TRMT6Q9UJA5 497 aaKnown RBP8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 IPPQ9Y573 584 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 CNTNAP2Q9UHC6 1331 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 HMX3A6NHT5 357 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 ZBBXA8MT70 800 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 CXorf49A8MYA2 514 aaPredicted RBP8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 SLC4A1P02730 911 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 ATP2B4P23634 1241 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 CRHBPP24387 322 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 PSMA4P25789 261 aaKnown RBP8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 ADORA2AP29274 412 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 GP5P40197 560 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 POLD2P49005 469 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 CTSWP56202 376 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 CABP4P57796 275 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 DYNLL1P63167 89 aaKnown RBP8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 CBLBQ13191 982 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 SBK1Q52WX2 424 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 CATSPEREQ5SY80 951 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 GRTP1Q5TC63 336 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 LRRC38Q5VT99 294 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 PNCKQ6P2M8 343 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 DPY19L3Q6ZPD9 716 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 VN1R5Q7Z5H4 357 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 CELF2-AS1Q8N7Q2 184 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 ZNF781Q8N8C0 355 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 SMG8Q8ND04 991 aaKnown RBP8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 C7orf57Q8NEG2 295 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 STON2Q8WXE9 905 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 KAT5Q92993 513 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 NPAS2Q99743 824 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 C2orf40Q9H1Z8 148 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 RNPEPQ9H4A4 650 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 PAK1IP1Q9NWT1 392 aaPredicted RBP8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 TAS2R7Q9NYW3 318 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 IP6K2Q9UHH9 426 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 OAZ3Q9UMX2 235 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 AURKCQ9UQB9 309 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 PCDHGA7Q9Y5G6 932 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 NUP188Q5SRE5 1749 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 MARF1Q9Y4F3 1742 aaKnown RBP8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 hCG_1818297A0A087WSY0 165 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 AQP12BA6NM10 295 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 EI24O14681 340 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 PLD2O14939 933 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 ZBTB39O15060 712 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 ZBTB5O15062 677 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 TRIM24O15164 1050 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 GRIN3BO60391 1043 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 CPNE3O75131 537 aaKnown RBP8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 XYLBO75191 536 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 OR5F1O95221 314 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 TOP3BO95985 862 aaKnown RBP8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 C1QAP02745 245 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 HMGN1P05114 100 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 UNGP13051 313 aaPredicted RBP8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 FMO4P31512 558 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 VAMP7P51809 220 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 ADARB1P78563 741 aaKnown RBP8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 PON2Q15165 354 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 TAF12Q16514 161 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 TATDN1Q6P1N9 297 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 TAF2Q6P1X5 1199 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 SH3BP5LQ7L8J4 393 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 FBXO11Q86XK2 927 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 PLD3Q8IV08 490 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 TMEM151BQ8IW70 566 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 AQP12AQ8IXF9 295 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 MYCT1Q8N699 235 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 RDH13Q8NBN7 331 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 TP53I13Q8NBR0 393 aaPredicted RBP8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 MAGEE2Q8TD90 523 aaPredicted RBP8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 TAS1R2Q8TE23 839 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 DDX1Q92499 740 aaKnown RBP8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 C1orf74Q96LT6 269 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 OPALINQ96PE5 141 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 PHOX2BQ99453 314 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 REXO4Q9GZR2 422 aaKnown RBP8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 ILKAPQ9H0C8 392 aaPredicted RBP8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 TBC1D13Q9NVG8 400 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 TAS2R9Q9NYW1 312 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 CCDC59Q9P031 241 aaKnown RBP8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 FBXO40Q9UH90 709 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 GMEB2Q9UKD1 530 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 DIMT1Q9UNQ2 313 aaKnown RBP8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 BTBD3Q9Y2F9 522 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 ROBO1Q9Y6N7 1651 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms