RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 C1orf61Q13536 156 aa19.89■□□□□ 0.77
TNFRSF1B-204ENST00000536782 TMEM52BQ4KMG9 183 aa19.89■□□□□ 0.77
TNFRSF1B-204ENST00000536782 DCUN1D2Q6PH85 259 aa19.89■□□□□ 0.77
TNFRSF1B-204ENST00000536782 SASS6Q6UVJ0 657 aa19.89■□□□□ 0.77
TNFRSF1B-204ENST00000536782 MACC1Q6ZN28 852 aa19.89■□□□□ 0.77
TNFRSF1B-204ENST00000536782 TP53I13Q8NBR0 393 aaPredicted RBP19.89■□□□□ 0.77
TNFRSF1B-204ENST00000536782 HCAR2Q8TDS4 363 aa19.89■□□□□ 0.77
TNFRSF1B-204ENST00000536782 GRAMD1AQ96CP6 724 aa19.89■□□□□ 0.77
TNFRSF1B-204ENST00000536782 NAF1Q96HR8 494 aaKnown RBP19.89■□□□□ 0.77
TNFRSF1B-204ENST00000536782 ERGIC2Q96RQ1 377 aa19.89■□□□□ 0.77
TNFRSF1B-204ENST00000536782 LRRC61Q9BV99 259 aa19.89■□□□□ 0.77
TNFRSF1B-204ENST00000536782 ANO10Q9NW15 660 aa19.89■□□□□ 0.77
TNFRSF1B-204ENST00000536782 LHX3Q9UBR4 397 aa19.89■□□□□ 0.77
TNFRSF1B-204ENST00000536782 PNMA8BQ9ULN7 279 aaPredicted RBP19.89■□□□□ 0.77
TNFRSF1B-204ENST00000536782 ASH1LQ9NR48 2969 aaKnown RBP19.89■□□□□ 0.77
TNFRSF1B-204ENST00000536782 LMO7DNF2Z398 122 aa19.88■□□□□ 0.77
TNFRSF1B-204ENST00000536782 MUSKO15146 869 aa19.88■□□□□ 0.77
TNFRSF1B-204ENST00000536782 INSIG1O15503 277 aa19.88■□□□□ 0.77
TNFRSF1B-204ENST00000536782 C1QL1O75973 258 aa19.88■□□□□ 0.77
TNFRSF1B-204ENST00000536782 CCDC172P0C7W6 258 aa19.88■□□□□ 0.77
TNFRSF1B-204ENST00000536782 CXADRP78310 365 aa19.88■□□□□ 0.77
TNFRSF1B-204ENST00000536782 PPARDQ03181 441 aa19.88■□□□□ 0.77
TNFRSF1B-204ENST00000536782 GRM3Q14832 879 aa19.88■□□□□ 0.77
TNFRSF1B-204ENST00000536782 CYTH1Q15438 398 aa19.88■□□□□ 0.77
TNFRSF1B-204ENST00000536782 PPP1R15BQ5SWA1 713 aa19.88■□□□□ 0.77
TNFRSF1B-204ENST00000536782 C6orf132Q5T0Z8 1188 aa19.88■□□□□ 0.77
TNFRSF1B-204ENST00000536782 DNAAF5Q86Y56 855 aa19.88■□□□□ 0.77
TNFRSF1B-204ENST00000536782 LSM14AQ8ND56 463 aaKnown RBP19.88■□□□□ 0.77
TNFRSF1B-204ENST00000536782 NAT6Q93015 286 aa19.88■□□□□ 0.77
TNFRSF1B-204ENST00000536782 EXOC2Q96KP1 924 aa19.88■□□□□ 0.77
TNFRSF1B-204ENST00000536782 THSD1Q9NS62 852 aa19.88■□□□□ 0.77
TNFRSF1B-204ENST00000536782 DONSONQ9NYP3 566 aa19.88■□□□□ 0.77
TNFRSF1B-204ENST00000536782 UBA2Q9UBT2 640 aaPredicted RBP19.88■□□□□ 0.77
TNFRSF1B-204ENST00000536782 LRRK1Q38SD2 2015 aa19.88■□□□□ 0.77
TNFRSF1B-204ENST00000536782 LRRC10BA6NIK2 292 aa19.87■□□□□ 0.77
TNFRSF1B-204ENST00000536782 TMEM110-MUSTN1A8MSY1 372 aa19.87■□□□□ 0.77
TNFRSF1B-204ENST00000536782 TCEA3O75764 348 aa19.87■□□□□ 0.77
TNFRSF1B-204ENST00000536782 PIGNO95427 931 aa19.87■□□□□ 0.77
TNFRSF1B-204ENST00000536782 TSHRP16473 764 aa19.87■□□□□ 0.77
TNFRSF1B-204ENST00000536782 FERP16591 822 aa19.87■□□□□ 0.77
TNFRSF1B-204ENST00000536782 HTR7P34969 479 aa19.87■□□□□ 0.77
TNFRSF1B-204ENST00000536782 PEX5P50542 639 aa19.87■□□□□ 0.77
TNFRSF1B-204ENST00000536782 BLKP51451 505 aa19.87■□□□□ 0.77
TNFRSF1B-204ENST00000536782 TPI1P60174 286 aa19.87■□□□□ 0.77
TNFRSF1B-204ENST00000536782 C19orf57Q0VDD7 668 aa19.87■□□□□ 0.77
TNFRSF1B-204ENST00000536782 LRRC14Q15048 493 aa19.87■□□□□ 0.77
TNFRSF1B-204ENST00000536782 IRF4Q15306 451 aa19.87■□□□□ 0.77
TNFRSF1B-204ENST00000536782 C3orf38Q5JPI3 329 aa19.87■□□□□ 0.77
TNFRSF1B-204ENST00000536782 PERM1Q5SV97 790 aa19.87■□□□□ 0.77
TNFRSF1B-204ENST00000536782 BROXQ5VW32 411 aa19.87■□□□□ 0.77
TNFRSF1B-204ENST00000536782 ACAD10Q6JQN1 1059 aa19.87■□□□□ 0.77
TNFRSF1B-204ENST00000536782 ESRP1Q6NXG1 681 aaKnown RBP19.87■□□□□ 0.77
TNFRSF1B-204ENST00000536782 CRTC1Q6UUV9 634 aa19.87■□□□□ 0.77
TNFRSF1B-204ENST00000536782 RBM44Q6ZP01 1051 aaKnown RBP19.87■□□□□ 0.77
TNFRSF1B-204ENST00000536782 SLC35F3Q8IY50 421 aa19.87■□□□□ 0.77
TNFRSF1B-204ENST00000536782 MCOLN2Q8IZK6 566 aa19.87■□□□□ 0.77
TNFRSF1B-204ENST00000536782 CLPBQ9H078 707 aa19.87■□□□□ 0.77
TNFRSF1B-204ENST00000536782 SUV39H2Q9H5I1 410 aa19.87■□□□□ 0.77
TNFRSF1B-204ENST00000536782 SATB2Q9UPW6 733 aa19.87■□□□□ 0.77
TNFRSF1B-204ENST00000536782 TENM4Q6N022 2769 aa19.87■□□□□ 0.77
TNFRSF1B-204ENST00000536782 TSPAN11A1L157 253 aa19.86■□□□□ 0.77
TNFRSF1B-204ENST00000536782 YY2O15391 372 aa19.86■□□□□ 0.77
TNFRSF1B-204ENST00000536782 UCNP55089 124 aa19.86■□□□□ 0.77
TNFRSF1B-204ENST00000536782 STX1AQ16623 288 aa19.86■□□□□ 0.77
TNFRSF1B-204ENST00000536782 UGP2Q16851 508 aa19.86■□□□□ 0.77
TNFRSF1B-204ENST00000536782 CFAP58Q5T655 872 aa19.86■□□□□ 0.77
TNFRSF1B-204ENST00000536782 IGF2-ASQ6U949 168 aa19.86■□□□□ 0.77
TNFRSF1B-204ENST00000536782 FSTL5Q8N475 847 aaPredicted RBP19.86■□□□□ 0.77
TNFRSF1B-204ENST00000536782 WDR48Q8TAF3 677 aa19.86■□□□□ 0.77
TNFRSF1B-204ENST00000536782 KCNE4Q8WWG9 221 aa19.86■□□□□ 0.77
TNFRSF1B-204ENST00000536782 ATXN7L3BQ96GX2 97 aa19.86■□□□□ 0.77
TNFRSF1B-204ENST00000536782 ZNF641Q96N77 438 aaPredicted RBP19.86■□□□□ 0.77
TNFRSF1B-204ENST00000536782 LRRC19Q9H756 370 aa19.86■□□□□ 0.77
TNFRSF1B-204ENST00000536782 PDFQ9HBH1 243 aa19.86■□□□□ 0.77
TNFRSF1B-204ENST00000536782 ASCL3Q9NQ33 180 aa19.86■□□□□ 0.77
TNFRSF1B-204ENST00000536782 PADI4Q9UM07 663 aa19.86■□□□□ 0.77
TNFRSF1B-204ENST00000536782 DOLKQ9UPQ8 538 aa19.86■□□□□ 0.77
TNFRSF1B-204ENST00000536782 COQ6Q9Y2Z9 468 aa19.86■□□□□ 0.77
TNFRSF1B-204ENST00000536782 ENTPD2Q9Y5L3 495 aa19.86■□□□□ 0.77
TNFRSF1B-204ENST00000536782 J3KR12 359 aa19.85■□□□□ 0.77
TNFRSF1B-204ENST00000536782 HTR1BP28222 390 aa19.85■□□□□ 0.77
TNFRSF1B-204ENST00000536782 RBMS1P29558 406 aaKnown RBP19.85■□□□□ 0.77
TNFRSF1B-204ENST00000536782 NDST2P52849 883 aa19.85■□□□□ 0.77
TNFRSF1B-204ENST00000536782 TMPRSS3P57727 454 aa19.85■□□□□ 0.77
TNFRSF1B-204ENST00000536782 OGDHQ02218 1023 aa19.85■□□□□ 0.77
TNFRSF1B-204ENST00000536782 ELOCQ15369 112 aa19.85■□□□□ 0.77
TNFRSF1B-204ENST00000536782 WSCD2Q2TBF2 565 aa19.85■□□□□ 0.77
TNFRSF1B-204ENST00000536782 PPP1R2P3Q6NXS1 205 aa19.85■□□□□ 0.77
TNFRSF1B-204ENST00000536782 ERAP2Q6P179 960 aa19.85■□□□□ 0.77
TNFRSF1B-204ENST00000536782 BRAT1Q6PJG6 821 aa19.85■□□□□ 0.77
TNFRSF1B-204ENST00000536782 SCG3Q8WXD2 468 aaKnown RBP19.85■□□□□ 0.77
TNFRSF1B-204ENST00000536782 VCPIP1Q96JH7 1222 aa19.85■□□□□ 0.77
TNFRSF1B-204ENST00000536782 PCDH12Q9NPG4 1184 aa19.85■□□□□ 0.77
TNFRSF1B-204ENST00000536782 ARHGAP42A6NI28 874 aa19.84■□□□□ 0.77
TNFRSF1B-204ENST00000536782 EIF3CLB5ME19 914 aaKnown RBP19.84■□□□□ 0.77
TNFRSF1B-204ENST00000536782 PRAMEF11O60813 436 aa19.84■□□□□ 0.77
TNFRSF1B-204ENST00000536782 ALPIP09923 528 aa19.84■□□□□ 0.77
TNFRSF1B-204ENST00000536782 C6P13671 934 aa19.84■□□□□ 0.77
TNFRSF1B-204ENST00000536782 CTSEP14091 401 aa19.84■□□□□ 0.77
TNFRSF1B-204ENST00000536782 TNFAIP3P21580 790 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms