RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 RPS13P62277 151 aaKnown RBP5.94□□□□□ -1.46
CLIP1-207ENST00000536634 BTKQ06187 659 aa5.94□□□□□ -1.46
CLIP1-207ENST00000536634 DMWDQ09019 674 aa5.94□□□□□ -1.46
CLIP1-207ENST00000536634 STIM1Q13586 685 aa5.94□□□□□ -1.46
CLIP1-207ENST00000536634 RBMS2Q15434 407 aaKnown RBP5.94□□□□□ -1.46
CLIP1-207ENST00000536634 TRIM71Q2Q1W2 868 aaKnown RBP5.94□□□□□ -1.46
CLIP1-207ENST00000536634 LEXMQ3ZCV2 418 aa5.94□□□□□ -1.46
CLIP1-207ENST00000536634 EARS2Q5JPH6 523 aaKnown RBP5.94□□□□□ -1.46
CLIP1-207ENST00000536634 FAM83BQ5T0W9 1011 aa5.94□□□□□ -1.46
CLIP1-207ENST00000536634 SNRNP48Q6IEG0 339 aaKnown RBP5.94□□□□□ -1.46
CLIP1-207ENST00000536634 ARMCX2Q7L311 632 aa5.94□□□□□ -1.46
CLIP1-207ENST00000536634 PIP4P1Q86T03 277 aa5.94□□□□□ -1.46
CLIP1-207ENST00000536634 TTC30AQ86WT1 665 aa5.94□□□□□ -1.46
CLIP1-207ENST00000536634 HERC6Q8IVU3 1022 aa5.94□□□□□ -1.46
CLIP1-207ENST00000536634 STYXQ8WUJ0 223 aa5.94□□□□□ -1.46
CLIP1-207ENST00000536634 SDR42E1Q8WUS8 393 aa5.94□□□□□ -1.46
CLIP1-207ENST00000536634 DYNLL2Q96FJ2 89 aa5.94□□□□□ -1.46
CLIP1-207ENST00000536634 SLC39A13Q96H72 371 aa5.94□□□□□ -1.46
CLIP1-207ENST00000536634 ZNF845Q96IR2 970 aaPredicted RBP5.94□□□□□ -1.46
CLIP1-207ENST00000536634 GPR78Q96P69 363 aa5.94□□□□□ -1.46
CLIP1-207ENST00000536634 ZNF700Q9H0M5 742 aa5.94□□□□□ -1.46
CLIP1-207ENST00000536634 ALDH8A1Q9H2A2 487 aaPredicted RBP5.94□□□□□ -1.46
CLIP1-207ENST00000536634 ABHD16BQ9H3Z7 469 aa5.94□□□□□ -1.46
CLIP1-207ENST00000536634 SMC4Q9NTJ3 1288 aa5.94□□□□□ -1.46
CLIP1-207ENST00000536634 DBNLQ9UJU6 430 aaKnown RBP5.94□□□□□ -1.46
CLIP1-207ENST00000536634 B3GNT3Q9Y2A9 372 aa5.94□□□□□ -1.46
CLIP1-207ENST00000536634 UBE2J1Q9Y385 318 aaPredicted RBP5.94□□□□□ -1.46
CLIP1-207ENST00000536634 CHD6Q8TD26 2715 aa5.94□□□□□ -1.46
CLIP1-207ENST00000536634 ATG2AQ2TAZ0 1938 aa5.93□□□□□ -1.46
CLIP1-207ENST00000536634 GREB1LQ9C091 1923 aaPredicted RBP5.93□□□□□ -1.46
CLIP1-207ENST00000536634 SCN10AQ9Y5Y9 1956 aa5.93□□□□□ -1.46
CLIP1-207ENST00000536634 LOC105369274A0A096LPK9 316 aa5.93□□□□□ -1.46
CLIP1-207ENST00000536634 LOC102723532A0A0G2JNH3 316 aa5.93□□□□□ -1.46
CLIP1-207ENST00000536634 H3BQ06 376 aaPredicted RBP5.93□□□□□ -1.46
CLIP1-207ENST00000536634 DNPH1O43598 174 aa5.93□□□□□ -1.46
CLIP1-207ENST00000536634 CNOT3O75175 753 aaKnown RBP5.93□□□□□ -1.46
CLIP1-207ENST00000536634 RPP40O75818 363 aaKnown RBP5.93□□□□□ -1.46
CLIP1-207ENST00000536634 TNFRSF6BO95407 300 aa5.93□□□□□ -1.46
CLIP1-207ENST00000536634 EEF2P13639 858 aaKnown RBP5.93□□□□□ -1.46
CLIP1-207ENST00000536634 COPB2P35606 906 aa5.93□□□□□ -1.46
CLIP1-207ENST00000536634 NR4A2P43354 598 aa5.93□□□□□ -1.46
CLIP1-207ENST00000536634 CPA2P48052 419 aa5.93□□□□□ -1.46
CLIP1-207ENST00000536634 ALDH18A1P54886 795 aaKnown RBP5.93□□□□□ -1.46
CLIP1-207ENST00000536634 KRTAP10-11P60412 298 aa5.93□□□□□ -1.46
CLIP1-207ENST00000536634 CNTN2Q02246 1040 aa5.93□□□□□ -1.46
CLIP1-207ENST00000536634 TOGARAM2Q6ZUX3 1019 aa5.93□□□□□ -1.46
CLIP1-207ENST00000536634 TLK2Q86UE8 772 aa5.93□□□□□ -1.46
CLIP1-207ENST00000536634 RHPN2Q8IUC4 686 aa5.93□□□□□ -1.46
CLIP1-207ENST00000536634 OR4N4Q8N0Y3 316 aa5.93□□□□□ -1.46
CLIP1-207ENST00000536634 FCRL4Q96PJ5 515 aa5.93□□□□□ -1.46
CLIP1-207ENST00000536634 TMEM79Q9BSE2 394 aa5.93□□□□□ -1.46
CLIP1-207ENST00000536634 TEX13BQ9BXU2 312 aa5.93□□□□□ -1.46
CLIP1-207ENST00000536634 OBP2BQ9NPH6 170 aa5.93□□□□□ -1.46
CLIP1-207ENST00000536634 MCM9Q9NXL9 1143 aa5.93□□□□□ -1.46
CLIP1-207ENST00000536634 MTUS1Q9ULD2 1270 aa5.93□□□□□ -1.46
CLIP1-207ENST00000536634 KMT2EQ8IZD2 1858 aa5.93□□□□□ -1.46
CLIP1-207ENST00000536634 EP300Q09472 2414 aaPredicted RBP5.93□□□□□ -1.46
CLIP1-207ENST00000536634 ZMYM2Q9UBW7 1377 aa5.93□□□□□ -1.46
CLIP1-207ENST00000536634 A0A087WV62 115 aa5.92□□□□□ -1.46
CLIP1-207ENST00000536634 CCDC194A0A1B0GVG4 234 aa5.92□□□□□ -1.46
CLIP1-207ENST00000536634 CABYRO75952 493 aa5.92□□□□□ -1.46
CLIP1-207ENST00000536634 HMGB1P09429 215 aaKnown RBP5.92□□□□□ -1.46
CLIP1-207ENST00000536634 AKT1P31749 480 aa5.92□□□□□ -1.46
CLIP1-207ENST00000536634 DEFB103AP81534 67 aa5.92□□□□□ -1.46
CLIP1-207ENST00000536634 TNFAIP2Q03169 654 aa5.92□□□□□ -1.46
CLIP1-207ENST00000536634 G3BP1Q13283 466 aaKnown RBP eCLIP5.92□□□□□ -1.46
CLIP1-207ENST00000536634 CBFBQ13951 182 aa5.92□□□□□ -1.46
CLIP1-207ENST00000536634 TCTN1Q2MV58 587 aa5.92□□□□□ -1.46
CLIP1-207ENST00000536634 ALDH1L2Q3SY69 923 aa5.92□□□□□ -1.46
CLIP1-207ENST00000536634 CCDC158Q5M9N0 1113 aa5.92□□□□□ -1.46
CLIP1-207ENST00000536634 RINT1Q6NUQ1 792 aa5.92□□□□□ -1.46
CLIP1-207ENST00000536634 NOL8Q76FK4 1167 aaKnown RBP5.92□□□□□ -1.46
CLIP1-207ENST00000536634 ANKRD13BQ86YJ7 626 aa5.92□□□□□ -1.46
CLIP1-207ENST00000536634 CPXCR1Q8N123 301 aa5.92□□□□□ -1.46
CLIP1-207ENST00000536634 OR1N1Q8NGS0 311 aa5.92□□□□□ -1.46
CLIP1-207ENST00000536634 PHOSPHO2Q8TCD6 241 aa5.92□□□□□ -1.46
CLIP1-207ENST00000536634 NEK9Q8TD19 979 aa5.92□□□□□ -1.46
CLIP1-207ENST00000536634 SLF1Q9BQI6 1058 aa5.92□□□□□ -1.46
CLIP1-207ENST00000536634 WDR12Q9GZL7 423 aaKnown RBP5.92□□□□□ -1.46
CLIP1-207ENST00000536634 SH2D4AQ9H788 454 aa5.92□□□□□ -1.46
CLIP1-207ENST00000536634 MOV10Q9HCE1 1003 aaKnown RBP5.92□□□□□ -1.46
CLIP1-207ENST00000536634 HEY2Q9UBP5 337 aa5.92□□□□□ -1.46
CLIP1-207ENST00000536634 MAGED2Q9UNF1 606 aaPredicted RBP5.92□□□□□ -1.46
CLIP1-207ENST00000536634 ACACBO00763 2458 aa5.92□□□□□ -1.46
CLIP1-207ENST00000536634 SPTBN2O15020 2390 aa5.92□□□□□ -1.46
CLIP1-207ENST00000536634 PLXNA3P51805 1871 aa5.92□□□□□ -1.46
CLIP1-207ENST00000536634 WDFY3Q8IZQ1 3526 aa5.91□□□□□ -1.46
CLIP1-207ENST00000536634 LY6G6EA0A0G2JKS1 128 aa5.91□□□□□ -1.46
CLIP1-207ENST00000536634 LGALS16A8MUM7 142 aa5.91□□□□□ -1.46
CLIP1-207ENST00000536634 FFAR2O15552 330 aa5.91□□□□□ -1.46
CLIP1-207ENST00000536634 PRKAB2O43741 272 aa5.91□□□□□ -1.46
CLIP1-207ENST00000536634 CD63P08962 238 aa5.91□□□□□ -1.46
CLIP1-207ENST00000536634 IQCF3P0C7M6 154 aa5.91□□□□□ -1.46
CLIP1-207ENST00000536634 RFPL3SP0C7P2 107 aa5.91□□□□□ -1.46
CLIP1-207ENST00000536634 SETSIPP0DME0 302 aa5.91□□□□□ -1.46
CLIP1-207ENST00000536634 HTR3AP46098 478 aa5.91□□□□□ -1.46
CLIP1-207ENST00000536634 FAM3BP58499 235 aaPredicted RBP5.91□□□□□ -1.46
CLIP1-207ENST00000536634 SPARCL1Q14515 664 aa5.91□□□□□ -1.46
CLIP1-207ENST00000536634 GPNMBQ14956 572 aa5.91□□□□□ -1.46
CLIP1-207ENST00000536634 ANKRD40Q6AI12 368 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms