RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 DEPDC1BQ8WUY9 529 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 SHDQ96IW2 340 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 TMEM209Q96SK2 561 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 EBNA1BP2Q99848 306 aaKnown RBP11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 SH3GL1Q99961 368 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 NAT9Q9BTE0 207 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 BCO2Q9BYV7 579 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 MTMR12Q9C0I1 747 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 CRISPLD1Q9H336 500 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 C12orf65Q9H3J6 166 aaKnown RBP11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 HESX1Q9UBX0 185 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 PCSK1NQ9UHG2 260 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 FAM170BA6NMN3 283 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 DPYSL4O14531 572 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 XPOTO43592 962 aaKnown RBP11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 AP1G1O43747 822 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 H2AFYO75367 372 aaKnown RBP11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 SERPINE1P05121 402 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 PDGFRBP09619 1106 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 MLNP12872 115 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 GARSP41250 739 aaKnown RBP11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 HK2P52789 917 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 LILRA4P59901 499 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 TFAMQ00059 246 aaKnown RBP11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 PRKCQQ04759 706 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 GRM2Q14416 872 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 UBXN2BQ14CS0 331 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 NDUFA5Q16718 116 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 METTL21CQ5VZV1 264 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 C9orf57Q5W0N0 161 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 LRRC49Q8IUZ0 686 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 KBTBD2Q8IY47 623 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 CXorf38Q8TB03 319 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 ELSPBP1Q96BH3 223 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 PRR11Q96HE9 360 aaPredicted RBP11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 SENP8Q96LD8 212 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 SERPINI1Q99574 410 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 ZNF670Q9BS34 389 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 SLC13A1Q9BZW2 595 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 PARVBQ9HBI1 364 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 USP29Q9HBJ7 922 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 PFDN4Q9NQP4 134 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 MAFFQ9ULX9 164 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 SLC27A5Q9Y2P5 690 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 YIPF1Q9Y548 306 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 R4GN57 208 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 EP300Q09472 2414 aaPredicted RBP11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 GVINP1Q7Z2Y8 2422 aa11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 ZNF292O60281 2723 aa11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 A0A088AWK7 358 aa11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 OR6C75A6NL08 312 aa11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 PRR5-ARHGAP8B1AHC4 643 aa11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 PIRO00625 290 aa11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 CASQ2O14958 399 aaPredicted RBP11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 BUD23O43709 281 aaKnown RBP11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 OPHN1O60890 802 aa11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 GCATO75600 419 aa11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 MICAL2O94851 1124 aa11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 C1QAP02745 245 aa11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 SP9P0CG40 484 aa11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 TYMPP19971 482 aa11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 MX2P20592 715 aa11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 FDFT1P37268 417 aa11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 MAGEA3P43357 314 aa11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 HSPA13P48723 471 aa11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 NR2C2P49116 596 aa11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 ARHGAP8P85298 464 aa11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 PFKPQ01813 784 aa11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 DUSP4Q13115 394 aa11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 TMEM132DQ14C87 1099 aa11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 FASTKD1Q53R41 847 aaKnown RBP11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 FAM102AQ5T9C2 384 aaPredicted RBP11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 OVOS1Q6IE37 1185 aa11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 CDHR3Q6ZTQ4 885 aa11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 PATL1Q86TB9 770 aaKnown RBP11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 C1orf210Q8IVY1 113 aa11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 MAML2Q8IZL2 1156 aaPredicted RBP11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 ELMOD1Q8N336 334 aa11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 TTC9BQ8N6N2 239 aa11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 ICA1LQ8NDH6 482 aa11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 TRPC4APQ8TEL6 797 aa11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 FAM84AQ96KN4 292 aa11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 ASB16Q96NS5 453 aa11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 LRRC3Q9BY71 257 aa11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 PLK2Q9NYY3 685 aa11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 C6orf203Q9P0P8 240 aaPredicted RBP11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 MID2Q9UJV3 735 aa11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 MAD1L1Q9Y6D9 718 aa11.74□□□□□ -0.53
CHRNB1-202ENST00000536404 SCN1AP35498 2009 aa11.73□□□□□ -0.53
CHRNB1-202ENST00000536404 ANK1P16157 1881 aa11.73□□□□□ -0.53
CHRNB1-202ENST00000536404 FRYLO94915 3013 aa11.73□□□□□ -0.53
CHRNB1-202ENST00000536404 SHISA7A6NL88 538 aa11.73□□□□□ -0.53
CHRNB1-202ENST00000536404 GOLGA8TH3BQL2 631 aa11.73□□□□□ -0.53
CHRNB1-202ENST00000536404 LSM1O15116 133 aaKnown RBP11.73□□□□□ -0.53
CHRNB1-202ENST00000536404 SOAT2O75908 522 aa11.73□□□□□ -0.53
CHRNB1-202ENST00000536404 ERBB2P04626 1255 aa11.73□□□□□ -0.53
CHRNB1-202ENST00000536404 CD48P09326 243 aa11.73□□□□□ -0.53
CHRNB1-202ENST00000536404 CPOXP36551 454 aa11.73□□□□□ -0.53
CHRNB1-202ENST00000536404 VIPR2P41587 438 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms