RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 APOC2P02655 101 aa18.04■□□□□ 0.48
DDX55-204ENST00000536079 WNT1P04628 370 aa18.04■□□□□ 0.48
DDX55-204ENST00000536079 PRLRP16471 622 aa18.04■□□□□ 0.48
DDX55-204ENST00000536079 PTPN3P26045 913 aa18.04■□□□□ 0.48
DDX55-204ENST00000536079 CD27P26842 260 aa18.04■□□□□ 0.48
DDX55-204ENST00000536079 OTUD4Q01804 1114 aaKnown RBP18.04■□□□□ 0.48
DDX55-204ENST00000536079 BCL2L1Q07817 233 aa18.04■□□□□ 0.48
DDX55-204ENST00000536079 WASHC5Q12768 1159 aa18.04■□□□□ 0.48
DDX55-204ENST00000536079 KLF1Q13351 362 aaPredicted RBP18.04■□□□□ 0.48
DDX55-204ENST00000536079 TMEM259Q4ZIN3 620 aa18.04■□□□□ 0.48
DDX55-204ENST00000536079 ALG1LQ6GMV1 187 aa18.04■□□□□ 0.48
DDX55-204ENST00000536079 TFB1MQ8WVM0 346 aaKnown RBP18.04■□□□□ 0.48
DDX55-204ENST00000536079 AGAP3Q96P47 875 aa18.04■□□□□ 0.48
DDX55-204ENST00000536079 QKIQ96PU8 341 aaKnown RBP eCLIP18.04■□□□□ 0.48
DDX55-204ENST00000536079 TLR10Q9BXR5 811 aa18.04■□□□□ 0.48
DDX55-204ENST00000536079 CAPN10Q9HC96 672 aa18.04■□□□□ 0.48
DDX55-204ENST00000536079 TM9SF3Q9HD45 589 aa18.04■□□□□ 0.48
DDX55-204ENST00000536079 PCDH12Q9NPG4 1184 aa18.04■□□□□ 0.48
DDX55-204ENST00000536079 DMXL1Q9Y485 3027 aa18.04■□□□□ 0.48
DDX55-204ENST00000536079 PTPRZ1P23471 2315 aaPredicted RBP18.03■□□□□ 0.48
DDX55-204ENST00000536079 LNP1A1A4G5 178 aa18.03■□□□□ 0.48
DDX55-204ENST00000536079 IGLON5A6NGN9 336 aa18.03■□□□□ 0.48
DDX55-204ENST00000536079 UPK3BL1B0FP48 263 aa18.03■□□□□ 0.48
DDX55-204ENST00000536079 UPK3BL2E5RIL1 263 aa18.03■□□□□ 0.48
DDX55-204ENST00000536079 RAD51BO15315 384 aa18.03■□□□□ 0.48
DDX55-204ENST00000536079 BCAT2O15382 392 aaPredicted RBP18.03■□□□□ 0.48
DDX55-204ENST00000536079 CFIP05156 583 aa18.03■□□□□ 0.48
DDX55-204ENST00000536079 PDHA1P08559 390 aa18.03■□□□□ 0.48
DDX55-204ENST00000536079 SERPINA4P29622 427 aa18.03■□□□□ 0.48
DDX55-204ENST00000536079 CD68P34810 354 aaPredicted RBP18.03■□□□□ 0.48
DDX55-204ENST00000536079 CSNK1EP49674 416 aaKnown RBP18.03■□□□□ 0.48
DDX55-204ENST00000536079 GRM3Q14832 879 aa18.03■□□□□ 0.48
DDX55-204ENST00000536079 RPS6KA1Q15418 735 aa18.03■□□□□ 0.48
DDX55-204ENST00000536079 UGP2Q16851 508 aa18.03■□□□□ 0.48
DDX55-204ENST00000536079 DUOXA1Q1HG43 343 aa18.03■□□□□ 0.48
DDX55-204ENST00000536079 SLC23A3Q6PIS1 610 aa18.03■□□□□ 0.48
DDX55-204ENST00000536079 KDM7AQ6ZMT4 941 aa18.03■□□□□ 0.48
DDX55-204ENST00000536079 HORMAD1Q86X24 394 aa18.03■□□□□ 0.48
DDX55-204ENST00000536079 BBS5Q8N3I7 341 aa18.03■□□□□ 0.48
DDX55-204ENST00000536079 OR2I1PQ8NGU4 316 aa18.03■□□□□ 0.48
DDX55-204ENST00000536079 HCAR2Q8TDS4 363 aa18.03■□□□□ 0.48
DDX55-204ENST00000536079 MYOCQ99972 504 aa18.03■□□□□ 0.48
DDX55-204ENST00000536079 POLR1EQ9GZS1 481 aaKnown RBP18.03■□□□□ 0.48
DDX55-204ENST00000536079 FZD3Q9NPG1 666 aa18.03■□□□□ 0.48
DDX55-204ENST00000536079 A0A0U1RQS6 177 aa18.02■□□□□ 0.48
DDX55-204ENST00000536079 KHNYNO15037 678 aaKnown RBP18.02■□□□□ 0.48
DDX55-204ENST00000536079 SLC31A1O15431 190 aa18.02■□□□□ 0.48
DDX55-204ENST00000536079 MMP20O60882 483 aa18.02■□□□□ 0.48
DDX55-204ENST00000536079 RBL1P28749 1068 aa18.02■□□□□ 0.48
DDX55-204ENST00000536079 SKOR1P84550 965 aa18.02■□□□□ 0.48
DDX55-204ENST00000536079 RALGDSQ12967 914 aa18.02■□□□□ 0.48
DDX55-204ENST00000536079 NEK5Q6P3R8 708 aa18.02■□□□□ 0.48
DDX55-204ENST00000536079 PRPF39Q86UA1 669 aaKnown RBP18.02■□□□□ 0.48
DDX55-204ENST00000536079 PDCD6IPQ8WUM4 868 aaKnown RBP18.02■□□□□ 0.48
DDX55-204ENST00000536079 RAB7BQ96AH8 199 aa18.02■□□□□ 0.48
DDX55-204ENST00000536079 ALS2CR12Q96Q35 445 aa18.02■□□□□ 0.48
DDX55-204ENST00000536079 WRAP53Q9BUR4 548 aaKnown RBP18.02■□□□□ 0.48
DDX55-204ENST00000536079 BRD8Q9H0E9 1235 aa18.02■□□□□ 0.48
DDX55-204ENST00000536079 RAI2Q9Y5P3 530 aa18.02■□□□□ 0.48
DDX55-204ENST00000536079 DOCK9Q9BZ29 2069 aa18.02■□□□□ 0.47
DDX55-204ENST00000536079 A0A1B0GTW7 788 aa18.01■□□□□ 0.47
DDX55-204ENST00000536079 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.01■□□□□ 0.47
DDX55-204ENST00000536079 A0A1B0GVT2 93 aa18.01■□□□□ 0.47
DDX55-204ENST00000536079 A0A1W2PR77 199 aa18.01■□□□□ 0.47
DDX55-204ENST00000536079 A8MX80 341 aa18.01■□□□□ 0.47
DDX55-204ENST00000536079 F5H423 210 aaPredicted RBP18.01■□□□□ 0.47
DDX55-204ENST00000536079 H7C0C1 242 aa18.01■□□□□ 0.47
DDX55-204ENST00000536079 RIOK3O14730 519 aaKnown RBP18.01■□□□□ 0.47
DDX55-204ENST00000536079 FZD6O60353 706 aa18.01■□□□□ 0.47
DDX55-204ENST00000536079 TJP3O95049 919 aa18.01■□□□□ 0.47
DDX55-204ENST00000536079 PGLSO95336 258 aa18.01■□□□□ 0.47
DDX55-204ENST00000536079 PRLP01236 227 aa18.01■□□□□ 0.47
DDX55-204ENST00000536079 SERPINF2P08697 491 aa18.01■□□□□ 0.47
DDX55-204ENST00000536079 HOXD12P35452 270 aa18.01■□□□□ 0.47
DDX55-204ENST00000536079 CD86P42081 329 aa18.01■□□□□ 0.47
DDX55-204ENST00000536079 MAPK8P45983 427 aa18.01■□□□□ 0.47
DDX55-204ENST00000536079 ATP5OP48047 213 aa18.01■□□□□ 0.47
DDX55-204ENST00000536079 CCDC15Q0P6D6 951 aa18.01■□□□□ 0.47
DDX55-204ENST00000536079 CCDC173Q0VFZ6 552 aa18.01■□□□□ 0.47
DDX55-204ENST00000536079 TMEM52BQ4KMG9 183 aa18.01■□□□□ 0.47
DDX55-204ENST00000536079 TEX44Q53QW1 395 aa18.01■□□□□ 0.47
DDX55-204ENST00000536079 SLC45A4Q5BKX6 768 aa18.01■□□□□ 0.47
DDX55-204ENST00000536079 CCDC181Q5TID7 509 aa18.01■□□□□ 0.47
DDX55-204ENST00000536079 BRAT1Q6PJG6 821 aa18.01■□□□□ 0.47
DDX55-204ENST00000536079 BZW1Q7L1Q6 419 aaKnown RBP18.01■□□□□ 0.47
DDX55-204ENST00000536079 ADAT2Q7Z6V5 191 aaKnown RBP18.01■□□□□ 0.47
DDX55-204ENST00000536079 TRIM58Q8NG06 486 aa18.01■□□□□ 0.47
DDX55-204ENST00000536079 PIH1D2Q8WWB5 315 aa18.01■□□□□ 0.47
DDX55-204ENST00000536079 FEM1CQ96JP0 617 aa18.01■□□□□ 0.47
DDX55-204ENST00000536079 SERAC1Q96JX3 654 aa18.01■□□□□ 0.47
DDX55-204ENST00000536079 RBM15Q96T37 977 aaKnown RBP eCLIP18.01■□□□□ 0.47
DDX55-204ENST00000536079 CAAP1Q9H8G2 361 aa18.01■□□□□ 0.47
DDX55-204ENST00000536079 AMACRQ9UHK6 382 aa18.01■□□□□ 0.47
DDX55-204ENST00000536079 SLC6A14Q9UN76 642 aa18.01■□□□□ 0.47
DDX55-204ENST00000536079 COQ6Q9Y2Z9 468 aa18.01■□□□□ 0.47
DDX55-204ENST00000536079 PCDHB9Q9Y5E1 797 aa18.01■□□□□ 0.47
DDX55-204ENST00000536079 PLXNA2O75051 1894 aa18.01■□□□□ 0.47
DDX55-204ENST00000536079 HACD1B0YJ81 288 aa18■□□□□ 0.47
DDX55-204ENST00000536079 CDX4O14627 284 aaPredicted RBP18■□□□□ 0.47
DDX55-204ENST00000536079 KCNK3O14649 394 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms