RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 PLEKP08567 350 aaPredicted RBP13.11□□□□□ -0.31
TNFRSF1A-207ENST00000535958 UCHL3P15374 230 aa13.11□□□□□ -0.31
TNFRSF1A-207ENST00000535958 UGT1A5P35504 534 aa13.11□□□□□ -0.31
TNFRSF1A-207ENST00000535958 PEX5P50542 639 aa13.11□□□□□ -0.31
TNFRSF1A-207ENST00000535958 SUOXP51687 545 aa13.11□□□□□ -0.31
TNFRSF1A-207ENST00000535958 PDX1P52945 283 aa13.11□□□□□ -0.31
TNFRSF1A-207ENST00000535958 SYCP1Q15431 976 aa13.11□□□□□ -0.31
TNFRSF1A-207ENST00000535958 HSP90AA4PQ58FG1 418 aa13.11□□□□□ -0.31
TNFRSF1A-207ENST00000535958 EFHC2Q5JST6 749 aa13.11□□□□□ -0.31
TNFRSF1A-207ENST00000535958 MANEALQ5VSG8 457 aa13.11□□□□□ -0.31
TNFRSF1A-207ENST00000535958 KLHDC7AQ5VTJ3 777 aa13.11□□□□□ -0.31
TNFRSF1A-207ENST00000535958 TRNP1Q6NT89 227 aa13.11□□□□□ -0.31
TNFRSF1A-207ENST00000535958 LVRNQ6Q4G3 990 aa13.11□□□□□ -0.31
TNFRSF1A-207ENST00000535958 STRADAQ7RTN6 431 aa13.11□□□□□ -0.31
TNFRSF1A-207ENST00000535958 BNIPLQ7Z465 357 aa13.11□□□□□ -0.31
TNFRSF1A-207ENST00000535958 NLRP14Q86W24 1093 aa13.11□□□□□ -0.31
TNFRSF1A-207ENST00000535958 IRF2BP1Q8IU81 584 aa13.11□□□□□ -0.31
TNFRSF1A-207ENST00000535958 ZSCAN1Q8NBB4 408 aa13.11□□□□□ -0.31
TNFRSF1A-207ENST00000535958 TP53I13Q8NBR0 393 aaPredicted RBP13.11□□□□□ -0.31
TNFRSF1A-207ENST00000535958 EPS8L1Q8TE68 723 aa13.11□□□□□ -0.31
TNFRSF1A-207ENST00000535958 FAM172AQ8WUF8 416 aa13.11□□□□□ -0.31
TNFRSF1A-207ENST00000535958 TSACCQ96A04 125 aaPredicted RBP13.11□□□□□ -0.31
TNFRSF1A-207ENST00000535958 C11orf70Q9BRQ4 267 aa13.11□□□□□ -0.31
TNFRSF1A-207ENST00000535958 CLPBQ9H078 707 aa13.11□□□□□ -0.31
TNFRSF1A-207ENST00000535958 MBNL1Q9NR56 388 aaKnown RBP13.11□□□□□ -0.31
TNFRSF1A-207ENST00000535958 PISDQ9UG56 409 aa13.11□□□□□ -0.31
TNFRSF1A-207ENST00000535958 PCDHB11Q9Y5F2 797 aa13.11□□□□□ -0.31
TNFRSF1A-207ENST00000535958 PCDHGA7Q9Y5G6 932 aa13.11□□□□□ -0.31
TNFRSF1A-207ENST00000535958 RP1P56715 2156 aa13.1□□□□□ -0.31
TNFRSF1A-207ENST00000535958 PYCARD-AS1I3L0S3 204 aa13.1□□□□□ -0.31
TNFRSF1A-207ENST00000535958 NTN3O00634 580 aaPredicted RBP13.1□□□□□ -0.31
TNFRSF1A-207ENST00000535958 WISP1O95388 367 aa13.1□□□□□ -0.31
TNFRSF1A-207ENST00000535958 TNFP01375 233 aa13.1□□□□□ -0.31
TNFRSF1A-207ENST00000535958 PCCBP05166 539 aa13.1□□□□□ -0.31
TNFRSF1A-207ENST00000535958 TPM2P07951 284 aa13.1□□□□□ -0.31
TNFRSF1A-207ENST00000535958 CELA2BP08218 269 aaPredicted RBP13.1□□□□□ -0.31
TNFRSF1A-207ENST00000535958 EPHB2P29323 1055 aa13.1□□□□□ -0.31
TNFRSF1A-207ENST00000535958 SLC5A2P31639 672 aa13.1□□□□□ -0.31
TNFRSF1A-207ENST00000535958 NFATC3Q12968 1075 aa13.1□□□□□ -0.31
TNFRSF1A-207ENST00000535958 GRM3Q14832 879 aa13.1□□□□□ -0.31
TNFRSF1A-207ENST00000535958 NFATC4Q14934 902 aa13.1□□□□□ -0.31
TNFRSF1A-207ENST00000535958 PHLDB2Q86SQ0 1253 aa13.1□□□□□ -0.31
TNFRSF1A-207ENST00000535958 EXOC2Q96KP1 924 aa13.1□□□□□ -0.31
TNFRSF1A-207ENST00000535958 WDR92Q96MX6 357 aa13.1□□□□□ -0.31
TNFRSF1A-207ENST00000535958 SELENOOQ9BVL4 669 aa13.1□□□□□ -0.31
TNFRSF1A-207ENST00000535958 STK33Q9BYT3 514 aa13.1□□□□□ -0.31
TNFRSF1A-207ENST00000535958 FOXP3Q9BZS1 431 aa13.1□□□□□ -0.31
TNFRSF1A-207ENST00000535958 CATSPERBQ9H7T0 1116 aa13.1□□□□□ -0.31
TNFRSF1A-207ENST00000535958 AKAP7Q9P0M2 348 aaPredicted RBP13.1□□□□□ -0.31
TNFRSF1A-207ENST00000535958 DKK3Q9UBP4 350 aa13.1□□□□□ -0.31
TNFRSF1A-207ENST00000535958 SSUH2Q9Y2M2 353 aa13.1□□□□□ -0.31
TNFRSF1A-207ENST00000535958 COQ6Q9Y2Z9 468 aa13.1□□□□□ -0.31
TNFRSF1A-207ENST00000535958 FAM72CH0Y354 149 aa13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 CACNB4O00305 520 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 CREB3O43889 395 aa13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 GFPT2O94808 682 aa13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 LIPCP11150 499 aa13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 KRT3P12035 628 aa13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 PTPN9P43378 593 aa13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 NSFP46459 744 aaKnown RBP13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 SRP54P61011 504 aaKnown RBP13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 UBE2HP62256 183 aa13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 CCL7P80098 99 aa13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 CDR2Q01850 454 aa13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 ALG11Q2TAA5 492 aa13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 PARP15Q460N3 678 aa13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 CCDC14Q49A88 953 aa13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 INO80DQ53TQ3 878 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 MANEAQ5SRI9 462 aa13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 FAM72AQ5TYM5 149 aa13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 FAM72DQ6L9T8 149 aa13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 SCYL2Q6P3W7 929 aa13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 TRIM72Q6ZMU5 477 aa13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 SLFN11Q7Z7L1 901 aa13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 B3GNT8Q7Z7M8 397 aa13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 FAM72BQ86X60 149 aa13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 DNAAF5Q86Y56 855 aa13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 CCNJLQ8IV13 435 aa13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 CCDC185Q8N715 623 aa13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 GPT2Q8TD30 523 aa13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 NTAN1Q96AB6 310 aa13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 TMEM159Q96B96 161 aa13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 SGF29Q96ES7 293 aa13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 APOOQ9BUR5 198 aa13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 LRRN3Q9H3W5 708 aa13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 DONSONQ9NYP3 566 aa13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 UBA2Q9UBT2 640 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 PNMA8BQ9ULN7 279 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 MFHAS1Q9Y4C4 1052 aa13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 DAAM1Q9Y4D1 1078 aa13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 LOXL2Q9Y4K0 774 aa13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 KIF26BQ2KJY2 2108 aa13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 CHD5Q8TDI0 1954 aa13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 TENM4Q6N022 2769 aa13.09□□□□□ -0.31
TNFRSF1A-207ENST00000535958 C2CD4BA6NLJ0 364 aa13.08□□□□□ -0.32
TNFRSF1A-207ENST00000535958 RASA4BC9J798 803 aa13.08□□□□□ -0.32
TNFRSF1A-207ENST00000535958 ARHGAP6O43182 974 aa13.08□□□□□ -0.32
TNFRSF1A-207ENST00000535958 RASA4O43374 803 aa13.08□□□□□ -0.32
TNFRSF1A-207ENST00000535958 PIGNO95427 931 aa13.08□□□□□ -0.32
TNFRSF1A-207ENST00000535958 CALB1P05937 261 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms