RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 UPK3BL2E5RIL1 263 aa22.93■■□□□ 1.26
SFSWAP-204ENST00000535399 HTRA2O43464 458 aaPredicted RBP22.93■■□□□ 1.26
SFSWAP-204ENST00000535399 TSPAN6O43657 245 aa22.93■■□□□ 1.26
SFSWAP-204ENST00000535399 JCHAINP01591 159 aa22.93■■□□□ 1.26
SFSWAP-204ENST00000535399 HLA-DQB2P05538 268 aa22.93■■□□□ 1.26
SFSWAP-204ENST00000535399 SUOXP51687 545 aa22.93■■□□□ 1.26
SFSWAP-204ENST00000535399 AFF3P51826 1226 aaKnown RBP22.93■■□□□ 1.26
SFSWAP-204ENST00000535399 RACK1P63244 317 aaKnown RBP22.93■■□□□ 1.26
SFSWAP-204ENST00000535399 BNC1Q01954 994 aa22.93■■□□□ 1.26
SFSWAP-204ENST00000535399 AP1B1Q10567 949 aa22.93■■□□□ 1.26
SFSWAP-204ENST00000535399 ZBTB17Q13105 803 aa22.93■■□□□ 1.26
SFSWAP-204ENST00000535399 FGL2Q14314 439 aa22.93■■□□□ 1.26
SFSWAP-204ENST00000535399 PRKD1Q15139 912 aaPredicted RBP22.93■■□□□ 1.26
SFSWAP-204ENST00000535399 UGP2Q16851 508 aa22.93■■□□□ 1.26
SFSWAP-204ENST00000535399 KIAA1161Q6NSJ0 714 aa22.93■■□□□ 1.26
SFSWAP-204ENST00000535399 UBL4BQ8N7F7 174 aa22.93■■□□□ 1.26
SFSWAP-204ENST00000535399 KLK6Q92876 244 aa22.93■■□□□ 1.26
SFSWAP-204ENST00000535399 FEM1CQ96JP0 617 aa22.93■■□□□ 1.26
SFSWAP-204ENST00000535399 SERAC1Q96JX3 654 aa22.93■■□□□ 1.26
SFSWAP-204ENST00000535399 SEMA3CQ99985 751 aa22.93■■□□□ 1.26
SFSWAP-204ENST00000535399 POLR1EQ9GZS1 481 aaKnown RBP22.93■■□□□ 1.26
SFSWAP-204ENST00000535399 KCNF1Q9H3M0 494 aa22.93■■□□□ 1.26
SFSWAP-204ENST00000535399 DMTF1Q9Y222 760 aa22.93■■□□□ 1.26
SFSWAP-204ENST00000535399 ATP8A1Q9Y2Q0 1164 aa22.93■■□□□ 1.26
SFSWAP-204ENST00000535399 RALGAPA1Q6GYQ0 2036 aa22.92■■□□□ 1.26
SFSWAP-204ENST00000535399 A0A1W2PR77 199 aa22.92■■□□□ 1.26
SFSWAP-204ENST00000535399 ARHGAP33O14559 1287 aa22.92■■□□□ 1.26
SFSWAP-204ENST00000535399 CDX4O14627 284 aaPredicted RBP22.92■■□□□ 1.26
SFSWAP-204ENST00000535399 SOCS5O75159 536 aa22.92■■□□□ 1.26
SFSWAP-204ENST00000535399 GRIA4P48058 902 aa22.92■■□□□ 1.26
SFSWAP-204ENST00000535399 CSNK1EP49674 416 aaKnown RBP22.92■■□□□ 1.26
SFSWAP-204ENST00000535399 RPS21P63220 83 aaKnown RBP22.92■■□□□ 1.26
SFSWAP-204ENST00000535399 TRAF2Q12933 501 aa22.92■■□□□ 1.26
SFSWAP-204ENST00000535399 GRIK2Q13002 908 aa22.92■■□□□ 1.26
SFSWAP-204ENST00000535399 IHHQ14623 411 aa22.92■■□□□ 1.26
SFSWAP-204ENST00000535399 SETMARQ53H47 684 aaPredicted RBP22.92■■□□□ 1.26
SFSWAP-204ENST00000535399 CFAP58Q5T655 872 aa22.92■■□□□ 1.26
SFSWAP-204ENST00000535399 NAPEPLDQ6IQ20 393 aa22.92■■□□□ 1.26
SFSWAP-204ENST00000535399 LAYNQ6UX15 382 aa22.92■■□□□ 1.26
SFSWAP-204ENST00000535399 CNTD1Q8N815 330 aa22.92■■□□□ 1.26
SFSWAP-204ENST00000535399 ARRDC2Q8TBH0 407 aa22.92■■□□□ 1.26
SFSWAP-204ENST00000535399 SPOCK2Q92563 424 aa22.92■■□□□ 1.26
SFSWAP-204ENST00000535399 P3H4Q92791 437 aa22.92■■□□□ 1.26
SFSWAP-204ENST00000535399 HAUS1Q96CS2 278 aa22.92■■□□□ 1.26
SFSWAP-204ENST00000535399 PCDH12Q9NPG4 1184 aa22.92■■□□□ 1.26
SFSWAP-204ENST00000535399 PCDHGC4Q9Y5F7 938 aa22.92■■□□□ 1.26
SFSWAP-204ENST00000535399 LAMA1P25391 3075 aa22.92■■□□□ 1.26
SFSWAP-204ENST00000535399 CACNA1EQ15878 2313 aa22.91■■□□□ 1.26
SFSWAP-204ENST00000535399 A0A1B0GVT2 93 aa22.91■■□□□ 1.26
SFSWAP-204ENST00000535399 NEMP1O14524 444 aa22.91■■□□□ 1.26
SFSWAP-204ENST00000535399 SLC31A1O15431 190 aa22.91■■□□□ 1.26
SFSWAP-204ENST00000535399 PRLRP16471 622 aa22.91■■□□□ 1.26
SFSWAP-204ENST00000535399 XPAP23025 273 aaPredicted RBP22.91■■□□□ 1.26
SFSWAP-204ENST00000535399 LIMK1P53667 647 aa22.91■■□□□ 1.26
SFSWAP-204ENST00000535399 DSC2Q02487 901 aa22.91■■□□□ 1.26
SFSWAP-204ENST00000535399 ITKQ08881 620 aa22.91■■□□□ 1.26
SFSWAP-204ENST00000535399 NIPAL4Q0D2K0 466 aa22.91■■□□□ 1.26
SFSWAP-204ENST00000535399 ZNF211Q13398 564 aaPredicted RBP22.91■■□□□ 1.26
SFSWAP-204ENST00000535399 FAM182AQ5T1J6 154 aa22.91■■□□□ 1.26
SFSWAP-204ENST00000535399 ZSCAN30Q86W11 494 aa22.91■■□□□ 1.26
SFSWAP-204ENST00000535399 NETO1Q8TDF5 533 aa22.91■■□□□ 1.26
SFSWAP-204ENST00000535399 PI4KAP42356 2102 aa22.91■■□□□ 1.26
SFSWAP-204ENST00000535399 DMXL1Q9Y485 3027 aa22.91■■□□□ 1.26
SFSWAP-204ENST00000535399 IGLON5A6NGN9 336 aa22.9■■□□□ 1.26
SFSWAP-204ENST00000535399 APOC4-APOC2K7ER74 178 aa22.9■■□□□ 1.26
SFSWAP-204ENST00000535399 RIOK3O14730 519 aaKnown RBP22.9■■□□□ 1.26
SFSWAP-204ENST00000535399 NEBLO76041 1014 aa22.9■■□□□ 1.26
SFSWAP-204ENST00000535399 APOC2P02655 101 aa22.9■■□□□ 1.26
SFSWAP-204ENST00000535399 WNT1P04628 370 aa22.9■■□□□ 1.26
SFSWAP-204ENST00000535399 PRKCGP05129 697 aa22.9■■□□□ 1.26
SFSWAP-204ENST00000535399 SYPP08247 313 aa22.9■■□□□ 1.26
SFSWAP-204ENST00000535399 CES1P23141 567 aa22.9■■□□□ 1.26
SFSWAP-204ENST00000535399 CETN2P41208 172 aa22.9■■□□□ 1.26
SFSWAP-204ENST00000535399 GSE1Q14687 1217 aa22.9■■□□□ 1.26
SFSWAP-204ENST00000535399 TEAD4Q15561 434 aa22.9■■□□□ 1.26
SFSWAP-204ENST00000535399 TMEM52BQ4KMG9 183 aa22.9■■□□□ 1.26
SFSWAP-204ENST00000535399 STPG1Q5TH74 334 aa22.9■■□□□ 1.26
SFSWAP-204ENST00000535399 TMEM145Q8NBT3 493 aa22.9■■□□□ 1.26
SFSWAP-204ENST00000535399 TFB1MQ8WVM0 346 aaKnown RBP22.9■■□□□ 1.26
SFSWAP-204ENST00000535399 UBE2Q2Q8WVN8 375 aa22.9■■□□□ 1.26
SFSWAP-204ENST00000535399 C1QTNF2Q9BXJ5 285 aa22.9■■□□□ 1.26
SFSWAP-204ENST00000535399 ZDHHC5Q9C0B5 715 aa22.9■■□□□ 1.26
SFSWAP-204ENST00000535399 AASDHPPTQ9NRN7 309 aa22.9■■□□□ 1.26
SFSWAP-204ENST00000535399 HAUS2Q9NVX0 235 aa22.9■■□□□ 1.26
SFSWAP-204ENST00000535399 TTLL3Q9Y4R7 772 aa22.9■■□□□ 1.26
SFSWAP-204ENST00000535399 PCDH15Q96QU1 1955 aa22.89■■□□□ 1.26
SFSWAP-204ENST00000535399 PRAMEF26H0Y7S4 382 aa22.89■■□□□ 1.25
SFSWAP-204ENST00000535399 VILLO15195 856 aa22.89■■□□□ 1.25
SFSWAP-204ENST00000535399 PTMAP06454 111 aaKnown RBP22.89■■□□□ 1.25
SFSWAP-204ENST00000535399 ELP6Q0PNE2 266 aa22.89■■□□□ 1.25
SFSWAP-204ENST00000535399 NOMO1Q15155 1222 aa22.89■■□□□ 1.25
SFSWAP-204ENST00000535399 RSPO4Q2I0M5 234 aaPredicted RBP22.89■■□□□ 1.25
SFSWAP-204ENST00000535399 ZC3H18Q86VM9 953 aaKnown RBP22.89■■□□□ 1.25
SFSWAP-204ENST00000535399 QKIQ96PU8 341 aaKnown RBP eCLIP22.89■■□□□ 1.25
SFSWAP-204ENST00000535399 GTPBP2Q9BX10 602 aaKnown RBP22.89■■□□□ 1.25
SFSWAP-204ENST00000535399 SLC17A9Q9BYT1 436 aa22.89■■□□□ 1.25
SFSWAP-204ENST00000535399 CEP41Q9BYV8 373 aa22.89■■□□□ 1.25
SFSWAP-204ENST00000535399 TMEM9BQ9NQ34 198 aa22.89■■□□□ 1.25
SFSWAP-204ENST00000535399 SEPT10Q9P0V9 454 aa22.89■■□□□ 1.25
SFSWAP-204ENST00000535399 CA5BQ9Y2D0 317 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms