RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 RHDQ02161 417 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 GNA12Q03113 381 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 PPP1R8Q12972 351 aaKnown RBP16.01■□□□□ 0.15
MCF2L-232ENST00000535094 C9orf57Q5W0N0 161 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 ARHGAP36Q6ZRI8 547 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 PLPPR4Q7Z2D5 763 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 TRPM4Q8TD43 1214 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 BLOC1S5Q8TDH9 187 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 HBEGFQ99075 208 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 BEGAINQ9BUH8 593 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 OSBPL6Q9BZF3 934 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 NT5MQ9NPB1 228 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 FADS3Q9Y5Q0 445 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 FOCADQ5VW36 1801 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 A0A0J9YYE9 177 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 SUPT3HB4E1H0 165 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 SPTLC1O15269 473 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 E2F6O75461 281 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 NPR3P17342 541 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 PRKCQQ04759 706 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 MAPK11Q15759 364 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 TRIM16LQ309B1 348 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 GPR158Q5T848 1215 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 LINC00523Q86TU6 105 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 NPWQ8N729 165 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 TRPC4APQ8TEL6 797 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 DCPSQ96C86 337 aaKnown RBP16.01■□□□□ 0.15
MCF2L-232ENST00000535094 KLRG1Q96E93 195 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 MLPHQ9BV36 600 aaPredicted RBP16.01■□□□□ 0.15
MCF2L-232ENST00000535094 ANKRD6Q9Y2G4 727 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 NDUFAF1Q9Y375 327 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 H3BMM5 538 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 EI24O14681 340 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 DYNC1LI2O43237 492 aaPredicted RBP16.01■□□□□ 0.15
MCF2L-232ENST00000535094 TOMM70O94826 608 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 LRIG2O94898 1065 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 SIX3O95343 332 aaPredicted RBP16.01■□□□□ 0.15
MCF2L-232ENST00000535094 PROZP22891 400 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 GRIK4Q16099 956 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 NOTUMQ6P988 496 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 STK32CQ86UX6 486 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 TMCO5AQ8N6Q1 288 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 VPS33AQ96AX1 596 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 MAML3Q96JK9 1138 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 ZFP42Q96MM3 310 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 C1orf50Q9BV19 199 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 ADI1Q9BV57 179 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 RHOBTB2Q9BYZ6 727 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 RNF39Q9H2S5 420 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 SEMA4BQ9NPR2 832 aaPredicted RBP16.01■□□□□ 0.15
MCF2L-232ENST00000535094 TRNAU1APQ9NX07 287 aaKnown RBP16.01■□□□□ 0.15
MCF2L-232ENST00000535094 NSMCE4AQ9NXX6 385 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 IGSF9Q9P2J2 1179 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 RBMX2Q9Y388 322 aaKnown RBP16.01■□□□□ 0.15
MCF2L-232ENST00000535094 IGKV6D-21A0A0A0MT36 114 aa16■□□□□ 0.15
MCF2L-232ENST00000535094 PGK1P00558 417 aa16■□□□□ 0.15
MCF2L-232ENST00000535094 HSPA1AP0DMV8 641 aaKnown RBP16■□□□□ 0.15
MCF2L-232ENST00000535094 HSPA1BP0DMV9 641 aaKnown RBP16■□□□□ 0.15
MCF2L-232ENST00000535094 SQLEQ14534 574 aa16■□□□□ 0.15
MCF2L-232ENST00000535094 ZNF484Q5JVG2 852 aa16■□□□□ 0.15
MCF2L-232ENST00000535094 NRBF2Q96F24 287 aa16■□□□□ 0.15
MCF2L-232ENST00000535094 HSFY1Q96LI6 401 aa16■□□□□ 0.15
MCF2L-232ENST00000535094 MRPL57Q9BQC6 102 aaKnown RBP16■□□□□ 0.15
MCF2L-232ENST00000535094 ZFYVE28Q9HCC9 887 aa16■□□□□ 0.15
MCF2L-232ENST00000535094 TIMM22Q9Y584 194 aa16■□□□□ 0.15
MCF2L-232ENST00000535094 OR51F1A6NGY5 319 aa16■□□□□ 0.15
MCF2L-232ENST00000535094 ZBTB42B2RXF5 422 aa16■□□□□ 0.15
MCF2L-232ENST00000535094 GSTA4O15217 222 aa16■□□□□ 0.15
MCF2L-232ENST00000535094 HMBSP08397 361 aa16■□□□□ 0.15
MCF2L-232ENST00000535094 CYP2C9P11712 490 aa16■□□□□ 0.15
MCF2L-232ENST00000535094 FRG1Q14331 258 aaKnown RBP16■□□□□ 0.15
MCF2L-232ENST00000535094 PCID2Q5JVF3 399 aa16■□□□□ 0.15
MCF2L-232ENST00000535094 APOBEC3FQ8IUX4 373 aaKnown RBP16■□□□□ 0.15
MCF2L-232ENST00000535094 OR2T34Q8NGX1 318 aa16■□□□□ 0.15
MCF2L-232ENST00000535094 OR2T3Q8NH03 318 aa16■□□□□ 0.15
MCF2L-232ENST00000535094 MPP6Q9NZW5 540 aa16■□□□□ 0.15
MCF2L-232ENST00000535094 SLC8A2Q9UPR5 921 aa16■□□□□ 0.15
MCF2L-232ENST00000535094 SH3GLB1Q9Y371 365 aa16■□□□□ 0.15
MCF2L-232ENST00000535094 MTSS1O43312 755 aa16■□□□□ 0.15
MCF2L-232ENST00000535094 HGFP14210 728 aa16■□□□□ 0.15
MCF2L-232ENST00000535094 GLUD2P49448 558 aa16■□□□□ 0.15
MCF2L-232ENST00000535094 C1QTNF8P60827 252 aa16■□□□□ 0.15
MCF2L-232ENST00000535094 NR1D2Q14995 579 aa16■□□□□ 0.15
MCF2L-232ENST00000535094 DNAJC14Q6Y2X3 702 aaPredicted RBP16■□□□□ 0.15
MCF2L-232ENST00000535094 RIOX2Q8IUF8 465 aa16■□□□□ 0.15
MCF2L-232ENST00000535094 NCLNQ969V3 563 aa16■□□□□ 0.15
MCF2L-232ENST00000535094 ESAMQ96AP7 390 aa16■□□□□ 0.15
MCF2L-232ENST00000535094 AAR2Q9Y312 384 aaKnown RBP16■□□□□ 0.15
MCF2L-232ENST00000535094 PLSCR1O15162 318 aa15.99■□□□□ 0.15
MCF2L-232ENST00000535094 KCNA5P22460 613 aa15.99■□□□□ 0.15
MCF2L-232ENST00000535094 EIF2B2P49770 351 aaKnown RBP15.99■□□□□ 0.15
MCF2L-232ENST00000535094 CDK9P50750 372 aaKnown RBP15.99■□□□□ 0.15
MCF2L-232ENST00000535094 IMPG1Q17R60 797 aa15.99■□□□□ 0.15
MCF2L-232ENST00000535094 PKN3Q6P5Z2 889 aa15.99■□□□□ 0.15
MCF2L-232ENST00000535094 SLC27A1Q6PCB7 646 aa15.99■□□□□ 0.15
MCF2L-232ENST00000535094 ERO1BQ86YB8 467 aa15.99■□□□□ 0.15
MCF2L-232ENST00000535094 KDM1BQ8NB78 822 aa15.99■□□□□ 0.15
MCF2L-232ENST00000535094 GBA3Q9H227 469 aa15.99■□□□□ 0.15
MCF2L-232ENST00000535094 ADM5C9JUS6 153 aa15.99■□□□□ 0.15
MCF2L-232ENST00000535094 BCL10O95999 233 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms