RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 CALN1Q9BXU9 219 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 MRPL9Q9BYD2 267 aaKnown RBP9.13□□□□□ -0.95
SF3B2-216ENST00000534765 POLR1BQ9H9Y6 1135 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 PLAC1Q9HBJ0 212 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 ADA2Q9NZK5 511 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 TEKT2Q9UIF3 430 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 ANGPTL3Q9Y5C1 460 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 USP3Q9Y6I4 520 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 MYLKQ15746 1914 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 RNF103-CHMP3A0A140T963 221 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 E2F8A0AVK6 867 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 H3BUI4 141 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 ITIH2P19823 946 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 FAM131BQ86XD5 332 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 C7orf57Q8NEG2 295 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 PXYLP1Q8TE99 480 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 DMRTB1Q96MA1 342 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 GPR62Q9BZJ7 368 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 CCDC90BQ9GZT6 254 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 NGRNQ9NPE2 291 aaKnown RBP9.12□□□□□ -0.95
SF3B2-216ENST00000534765 PAK6Q9NQU5 681 aaPredicted RBP9.12□□□□□ -0.95
SF3B2-216ENST00000534765 SNX13Q9Y5W8 968 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 F8W8V4 182 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 NRG2O14511 850 aaPredicted RBP9.12□□□□□ -0.95
SF3B2-216ENST00000534765 PQBP1O60828 265 aaKnown RBP9.12□□□□□ -0.95
SF3B2-216ENST00000534765 BMP10O95393 424 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 ZNF182P17025 639 aaPredicted RBP9.12□□□□□ -0.95
SF3B2-216ENST00000534765 WEE1P30291 646 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 GBE1Q04446 702 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 EFTUD2Q15029 972 aaKnown RBP eCLIP9.12□□□□□ -0.95
SF3B2-216ENST00000534765 PON2Q15165 354 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 FAM214AQ32MH5 1076 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 TMEM26Q6ZUK4 368 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 IGDCC3Q8IVU1 814 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 DEFB106AQ8N104 65 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 NATD1Q8N6N6 113 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 NAT16Q8N8M0 369 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 SLC35B2Q8TB61 432 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 KCTD15Q96SI1 283 aaPredicted RBP9.12□□□□□ -0.95
SF3B2-216ENST00000534765 BEGAINQ9BUH8 593 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 CEP41Q9BYV8 373 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.12□□□□□ -0.95
SF3B2-216ENST00000534765 STARD7Q9NQZ5 370 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 RGS18Q9NS28 235 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 XPO7Q9UIA9 1087 aaKnown RBP9.12□□□□□ -0.95
SF3B2-216ENST00000534765 SGK1O00141 431 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 ADAM12O43184 909 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 AQP9O43315 295 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 ZNF623O75123 536 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 AVILO75366 819 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 F7P08709 466 aaPredicted RBP9.12□□□□□ -0.95
SF3B2-216ENST00000534765 GPD1P21695 349 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 CYP2F1P24903 491 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 GCAP28676 217 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 NUDT2P50583 147 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 CRY1Q16526 586 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 TFDP3Q5H9I0 405 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 SPDYCQ5MJ68 293 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 NEPROQ6NW34 567 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 SCYL2Q6P3W7 929 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 ZCCHC7Q8N3Z6 543 aaKnown RBP9.12□□□□□ -0.95
SF3B2-216ENST00000534765 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.12□□□□□ -0.95
SF3B2-216ENST00000534765 GRIN3AQ8TCU5 1115 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 ELMO1Q92556 727 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 TMA16Q96EY4 203 aaKnown RBP9.12□□□□□ -0.95
SF3B2-216ENST00000534765 CHID1Q9BWS9 393 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 TP63Q9H3D4 680 aaPredicted RBP9.12□□□□□ -0.95
SF3B2-216ENST00000534765 PSMC3IPQ9P2W1 217 aaPredicted RBP9.12□□□□□ -0.95
SF3B2-216ENST00000534765 ERVK-11Q9UQG0 969 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 PMF1-BGLAPU3KQ54 211 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 KIAA1671Q9BY89 1806 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 ZNF839A8K0R7 811 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 NEMP1O14524 444 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 MED7O43513 233 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 TMEM63AO94886 807 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 SMIM18P0DKX4 95 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 L1CAMP32004 1257 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 ACADVLP49748 655 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 SEPHS1P49903 392 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 LSM3P62310 102 aaKnown RBP9.12□□□□□ -0.95
SF3B2-216ENST00000534765 ADRM1Q16186 407 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 RNF180Q86T96 592 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 FAM35AQ86V20 835 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 COLGALT2Q8IYK4 626 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 PQLC1Q8N2U9 271 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 CENPIQ92674 756 aaPredicted RBP9.12□□□□□ -0.95
SF3B2-216ENST00000534765 MYLPFQ96A32 169 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 DUSP16Q9BY84 665 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 STN1Q9H668 368 aaKnown RBP9.12□□□□□ -0.95
SF3B2-216ENST00000534765 HMX1Q9NP08 348 aaPredicted RBP9.12□□□□□ -0.95
SF3B2-216ENST00000534765 MAN1C1Q9NR34 630 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 ABCB10Q9NRK6 738 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 TBC1D13Q9NVG8 400 aa9.12□□□□□ -0.95
SF3B2-216ENST00000534765 PRG3Q9Y2Y8 225 aaPredicted RBP9.12□□□□□ -0.95
SF3B2-216ENST00000534765 ARVCFO00192 962 aa9.11□□□□□ -0.95
SF3B2-216ENST00000534765 GPR182O15218 404 aa9.11□□□□□ -0.95
SF3B2-216ENST00000534765 PRLP01236 227 aa9.11□□□□□ -0.95
SF3B2-216ENST00000534765 GOT1P17174 413 aa9.11□□□□□ -0.95
SF3B2-216ENST00000534765 SSTR1P30872 391 aa9.11□□□□□ -0.95
SF3B2-216ENST00000534765 CYP2C18P33260 490 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms