RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 LAMA2P24043 3122 aaKnown RBP28.66■■■□□ 2.18
SAMD1-202ENST00000533683 A0A1B0GVM2 712 aa28.66■■■□□ 2.18
SAMD1-202ENST00000533683 TCAF2A6NFQ2 919 aa28.66■■■□□ 2.18
SAMD1-202ENST00000533683 PPP3CCP48454 512 aa28.66■■■□□ 2.18
SAMD1-202ENST00000533683 WDR5P61964 334 aaKnown RBP28.66■■■□□ 2.18
SAMD1-202ENST00000533683 GALNT3Q14435 633 aa28.66■■■□□ 2.18
SAMD1-202ENST00000533683 TCEAL8Q8IYN2 117 aa28.66■■■□□ 2.18
SAMD1-202ENST00000533683 CMTR2Q8IYT2 770 aaKnown RBP28.66■■■□□ 2.18
SAMD1-202ENST00000533683 OR6P1Q8NGX9 317 aa28.66■■■□□ 2.18
SAMD1-202ENST00000533683 STYXQ8WUJ0 223 aa28.66■■■□□ 2.18
SAMD1-202ENST00000533683 SREK1Q8WXA9 508 aaKnown RBP28.66■■■□□ 2.18
SAMD1-202ENST00000533683 SCYL1Q96KG9 808 aa28.66■■■□□ 2.18
SAMD1-202ENST00000533683 CAPN14A8MX76 684 aa28.65■■■□□ 2.18
SAMD1-202ENST00000533683 ATP5BP06576 529 aaKnown RBP28.65■■■□□ 2.18
SAMD1-202ENST00000533683 RGRP47804 291 aa28.65■■■□□ 2.18
SAMD1-202ENST00000533683 DLG1Q12959 904 aa28.65■■■□□ 2.18
SAMD1-202ENST00000533683 C16orf59Q7L2K0 433 aa28.65■■■□□ 2.18
SAMD1-202ENST00000533683 SETD3Q86TU7 594 aaPredicted RBP28.65■■■□□ 2.18
SAMD1-202ENST00000533683 CILP2Q8IUL8 1156 aa28.65■■■□□ 2.18
SAMD1-202ENST00000533683 GABPB2Q8TAK5 448 aaPredicted RBP28.65■■■□□ 2.18
SAMD1-202ENST00000533683 BLOC1S5Q8TDH9 187 aa28.65■■■□□ 2.18
SAMD1-202ENST00000533683 NXNL1Q96CM4 212 aa28.65■■■□□ 2.18
SAMD1-202ENST00000533683 NSMCE3Q96MG7 304 aa28.65■■■□□ 2.18
SAMD1-202ENST00000533683 CYP2S1Q96SQ9 504 aa28.65■■■□□ 2.18
SAMD1-202ENST00000533683 CINPQ9BW66 212 aaPredicted RBP28.65■■■□□ 2.18
SAMD1-202ENST00000533683 GATA5Q9BWX5 397 aaPredicted RBP28.65■■■□□ 2.18
SAMD1-202ENST00000533683 MFSD1Q9H3U5 465 aa28.65■■■□□ 2.18
SAMD1-202ENST00000533683 TBC1D30Q9Y2I9 924 aa28.65■■■□□ 2.18
SAMD1-202ENST00000533683 INSL5Q9Y5Q6 135 aa28.65■■■□□ 2.18
SAMD1-202ENST00000533683 TARM1B6A8C7 271 aa28.65■■■□□ 2.18
SAMD1-202ENST00000533683 CCDC22O60826 627 aa28.65■■■□□ 2.18
SAMD1-202ENST00000533683 CALB2P22676 271 aa28.65■■■□□ 2.18
SAMD1-202ENST00000533683 TUBB3Q13509 450 aa28.65■■■□□ 2.18
SAMD1-202ENST00000533683 LRRC26Q2I0M4 334 aa28.65■■■□□ 2.18
SAMD1-202ENST00000533683 LRRC8EQ6NSJ5 796 aa28.65■■■□□ 2.18
SAMD1-202ENST00000533683 LONP2Q86WA8 852 aa28.65■■■□□ 2.18
SAMD1-202ENST00000533683 SPATA6LQ8N4H0 392 aa28.65■■■□□ 2.18
SAMD1-202ENST00000533683 ZFRQ96KR1 1074 aaKnown RBP28.65■■■□□ 2.18
SAMD1-202ENST00000533683 TRIB3Q96RU7 358 aa28.65■■■□□ 2.18
SAMD1-202ENST00000533683 NDNQ99608 321 aa28.65■■■□□ 2.18
SAMD1-202ENST00000533683 TLE6Q9H808 572 aa28.65■■■□□ 2.18
SAMD1-202ENST00000533683 TMEM114B3SHH9 223 aa28.64■■■□□ 2.18
SAMD1-202ENST00000533683 ZNF195O14628 629 aa28.64■■■□□ 2.18
SAMD1-202ENST00000533683 KLHL2O95198 593 aa28.64■■■□□ 2.18
SAMD1-202ENST00000533683 EPHB3P54753 998 aa28.64■■■□□ 2.18
SAMD1-202ENST00000533683 PRAMEP78395 509 aa28.64■■■□□ 2.18
SAMD1-202ENST00000533683 TREML1Q86YW5 311 aa28.64■■■□□ 2.18
SAMD1-202ENST00000533683 SLC22A12Q96S37 553 aa28.64■■■□□ 2.18
SAMD1-202ENST00000533683 MIPEPQ99797 713 aa28.64■■■□□ 2.18
SAMD1-202ENST00000533683 STN1Q9H668 368 aaKnown RBP28.64■■■□□ 2.18
SAMD1-202ENST00000533683 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP28.64■■■□□ 2.184e-10■■■■■ 33.9
SAMD1-202ENST00000533683 ARL5AQ9Y689 179 aa28.64■■■□□ 2.18
SAMD1-202ENST00000533683 H2AFYO75367 372 aaKnown RBP28.64■■■□□ 2.17
SAMD1-202ENST00000533683 SERPINA6P08185 405 aa28.64■■■□□ 2.17
SAMD1-202ENST00000533683 MBL2P11226 248 aaPredicted RBP28.64■■■□□ 2.17
SAMD1-202ENST00000533683 ALOX15P16050 662 aaPredicted RBP28.64■■■□□ 2.17
SAMD1-202ENST00000533683 ALDH18A1P54886 795 aaKnown RBP28.64■■■□□ 2.17
SAMD1-202ENST00000533683 SLC12A2P55011 1212 aa28.64■■■□□ 2.17
SAMD1-202ENST00000533683 SUGP1Q8IWZ8 645 aaKnown RBP28.64■■■□□ 2.17
SAMD1-202ENST00000533683 ZNF334Q9HCZ1 680 aaPredicted RBP28.64■■■□□ 2.17
SAMD1-202ENST00000533683 MRPL17Q9NRX2 175 aaKnown RBP28.64■■■□□ 2.17
SAMD1-202ENST00000533683 CAMSAP3Q9P1Y5 1249 aaPredicted RBP28.64■■■□□ 2.17
SAMD1-202ENST00000533683 OR51F1A6NGY5 319 aa28.63■■■□□ 2.17
SAMD1-202ENST00000533683 HSPA4LO95757 839 aa28.63■■■□□ 2.17
SAMD1-202ENST00000533683 ESRRAP11474 423 aaPredicted RBP28.63■■■□□ 2.17
SAMD1-202ENST00000533683 CLCN5P51795 746 aa28.63■■■□□ 2.17
SAMD1-202ENST00000533683 ACVR1Q04771 509 aa28.63■■■□□ 2.17
SAMD1-202ENST00000533683 CXorf57Q6NSI4 855 aaKnown RBP28.63■■■□□ 2.17
SAMD1-202ENST00000533683 GALNT7Q86SF2 657 aa28.63■■■□□ 2.17
SAMD1-202ENST00000533683 ZNF333Q96JL9 665 aa28.63■■■□□ 2.17
SAMD1-202ENST00000533683 TBATAQ96M53 351 aa28.63■■■□□ 2.17
SAMD1-202ENST00000533683 OLFM1Q99784 485 aa28.63■■■□□ 2.17
SAMD1-202ENST00000533683 MARCH4Q9P2E8 410 aaPredicted RBP28.63■■■□□ 2.17
SAMD1-202ENST00000533683 XPR1Q9UBH6 696 aa28.63■■■□□ 2.17
SAMD1-202ENST00000533683 A0A087X1B8 175 aa28.62■■■□□ 2.17
SAMD1-202ENST00000533683 TRIM43BA6NCK2 446 aa28.62■■■□□ 2.17
SAMD1-202ENST00000533683 CBX4O00257 560 aa28.62■■■□□ 2.17
SAMD1-202ENST00000533683 TEX28O15482 410 aa28.62■■■□□ 2.17
SAMD1-202ENST00000533683 BUD23O43709 281 aaKnown RBP28.62■■■□□ 2.17
SAMD1-202ENST00000533683 NDST3O95803 873 aa28.62■■■□□ 2.17
SAMD1-202ENST00000533683 TIMP1P01033 207 aa28.62■■■□□ 2.17
SAMD1-202ENST00000533683 F11P03951 625 aa28.62■■■□□ 2.17
SAMD1-202ENST00000533683 PIRTP0C851 137 aa28.62■■■□□ 2.17
SAMD1-202ENST00000533683 SMAD3P84022 425 aaKnown RBP28.62■■■□□ 2.17
SAMD1-202ENST00000533683 RFTN1Q14699 578 aaPredicted RBP28.62■■■□□ 2.17
SAMD1-202ENST00000533683 LIPMQ5VYY2 423 aa28.62■■■□□ 2.17
SAMD1-202ENST00000533683 RNF219Q5W0B1 726 aaPredicted RBP28.62■■■□□ 2.17
SAMD1-202ENST00000533683 LDB1Q86U70 411 aaPredicted RBP28.62■■■□□ 2.17
SAMD1-202ENST00000533683 ZNF781Q8N8C0 355 aa28.62■■■□□ 2.17
SAMD1-202ENST00000533683 BRSK1Q8TDC3 778 aa28.62■■■□□ 2.17
SAMD1-202ENST00000533683 TRIM43Q96BQ3 446 aaPredicted RBP28.62■■■□□ 2.17
SAMD1-202ENST00000533683 MOCOSQ96EN8 888 aa28.62■■■□□ 2.17
SAMD1-202ENST00000533683 EXOC2Q96KP1 924 aa28.62■■■□□ 2.17
SAMD1-202ENST00000533683 BTBD10Q9BSF8 475 aa28.62■■■□□ 2.17
SAMD1-202ENST00000533683 UNKQ9C0B0 810 aaKnown RBP28.62■■■□□ 2.17
SAMD1-202ENST00000533683 SUDS3Q9H7L9 328 aaPredicted RBP28.62■■■□□ 2.17
SAMD1-202ENST00000533683 CD248Q9HCU0 757 aa28.62■■■□□ 2.17
SAMD1-202ENST00000533683 TRPC7Q9HCX4 862 aa28.62■■■□□ 2.17
SAMD1-202ENST00000533683 DNAJC28Q9NX36 388 aa28.62■■■□□ 2.17
SAMD1-202ENST00000533683 STOML2Q9UJZ1 356 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms