RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 YPEL5P62699 121 aa15.59■□□□□ 0.09
CPSF1-211ENST00000533492 IL10RBQ08334 325 aa15.59■□□□□ 0.09
CPSF1-211ENST00000533492 PIGHQ14442 188 aaPredicted RBP15.59■□□□□ 0.09
CPSF1-211ENST00000533492 RFTN1Q14699 578 aaPredicted RBP15.59■□□□□ 0.09
CPSF1-211ENST00000533492 SMTNL2Q2TAL5 461 aa15.59■□□□□ 0.09
CPSF1-211ENST00000533492 AFMIDQ63HM1 303 aa15.59■□□□□ 0.09
CPSF1-211ENST00000533492 HGSNATQ68CP4 663 aa15.59■□□□□ 0.09
CPSF1-211ENST00000533492 BRAT1Q6PJG6 821 aa15.59■□□□□ 0.09
CPSF1-211ENST00000533492 CYP4V2Q6ZWL3 525 aaPredicted RBP15.59■□□□□ 0.09
CPSF1-211ENST00000533492 CAMK1DQ8IU85 385 aa15.59■□□□□ 0.09
CPSF1-211ENST00000533492 ARHGAP12Q8IWW6 846 aa15.59■□□□□ 0.09
CPSF1-211ENST00000533492 TSEN2Q8NCE0 465 aaKnown RBP15.59■□□□□ 0.09
CPSF1-211ENST00000533492 ZNF548Q8NEK5 533 aaPredicted RBP15.59■□□□□ 0.09
CPSF1-211ENST00000533492 LMX1AQ8TE12 382 aa15.59■□□□□ 0.09
CPSF1-211ENST00000533492 HSPH1Q92598 858 aa15.59■□□□□ 0.09
CPSF1-211ENST00000533492 NXPE2Q96DL1 559 aa15.59■□□□□ 0.09
CPSF1-211ENST00000533492 APOLD1Q96LR9 279 aa15.59■□□□□ 0.09
CPSF1-211ENST00000533492 IL12RB2Q99665 862 aa15.59■□□□□ 0.09
CPSF1-211ENST00000533492 PCDH12Q9NPG4 1184 aa15.59■□□□□ 0.09
CPSF1-211ENST00000533492 SPASTQ9UBP0 616 aa15.59■□□□□ 0.09
CPSF1-211ENST00000533492 CAPN11Q9UMQ6 739 aa15.59■□□□□ 0.09
CPSF1-211ENST00000533492 LHX6Q9UPM6 363 aa15.59■□□□□ 0.09
CPSF1-211ENST00000533492 CLCA2Q9UQC9 943 aa15.59■□□□□ 0.09
CPSF1-211ENST00000533492 RAXQ9Y2V3 346 aa15.59■□□□□ 0.09
CPSF1-211ENST00000533492 LUC7L2Q9Y383 392 aaKnown RBP15.59■□□□□ 0.09
CPSF1-211ENST00000533492 AK5Q9Y6K8 562 aa15.59■□□□□ 0.09
CPSF1-211ENST00000533492 CSNK1G3Q9Y6M4 447 aa15.59■□□□□ 0.09
CPSF1-211ENST00000533492 URB1O60287 2271 aaKnown RBP15.59■□□□□ 0.09
CPSF1-211ENST00000533492 WDFY3Q8IZQ1 3526 aa15.58■□□□□ 0.08
CPSF1-211ENST00000533492 TOR1BO14657 336 aa15.58■□□□□ 0.08
CPSF1-211ENST00000533492 AQP9O43315 295 aa15.58■□□□□ 0.08
CPSF1-211ENST00000533492 LZTS3O60299 673 aaPredicted RBP15.58■□□□□ 0.08
CPSF1-211ENST00000533492 BUB1BO60566 1050 aaPredicted RBP15.58■□□□□ 0.08
CPSF1-211ENST00000533492 IGFALSP35858 605 aa15.58■□□□□ 0.08
CPSF1-211ENST00000533492 EIF4A3P38919 411 aaKnown RBP15.58■□□□□ 0.08
CPSF1-211ENST00000533492 PBX1P40424 430 aa15.58■□□□□ 0.08
CPSF1-211ENST00000533492 SCNN1BP51168 640 aa15.58■□□□□ 0.08
CPSF1-211ENST00000533492 RENBPP51606 427 aa15.58■□□□□ 0.08
CPSF1-211ENST00000533492 INSM1Q01101 510 aaPredicted RBP15.58■□□□□ 0.08
CPSF1-211ENST00000533492 BCL2L1Q07817 233 aa15.58■□□□□ 0.08
CPSF1-211ENST00000533492 NSUN2Q08J23 767 aaKnown RBP eCLIP15.58■□□□□ 0.08
CPSF1-211ENST00000533492 EIF2B5Q13144 721 aaKnown RBP15.58■□□□□ 0.08
CPSF1-211ENST00000533492 LRRC14Q15048 493 aa15.58■□□□□ 0.08
CPSF1-211ENST00000533492 TPRG1LQ5T0D9 272 aa15.58■□□□□ 0.08
CPSF1-211ENST00000533492 FAXCQ5TGI0 409 aa15.58■□□□□ 0.08
CPSF1-211ENST00000533492 KDM7AQ6ZMT4 941 aa15.58■□□□□ 0.08
CPSF1-211ENST00000533492 ARHGAP36Q6ZRI8 547 aa15.58■□□□□ 0.08
CPSF1-211ENST00000533492 NPWQ8N729 165 aa15.58■□□□□ 0.08
CPSF1-211ENST00000533492 FAM181AQ8N9Y4 354 aa15.58■□□□□ 0.08
CPSF1-211ENST00000533492 TP53I13Q8NBR0 393 aaPredicted RBP15.58■□□□□ 0.08
CPSF1-211ENST00000533492 SLC13A1Q9BZW2 595 aa15.58■□□□□ 0.08
CPSF1-211ENST00000533492 THAP2Q9H0W7 228 aa15.58■□□□□ 0.08
CPSF1-211ENST00000533492 ABCG4Q9H172 646 aa15.58■□□□□ 0.08
CPSF1-211ENST00000533492 USP29Q9HBJ7 922 aa15.58■□□□□ 0.08
CPSF1-211ENST00000533492 MBNL1Q9NR56 388 aaKnown RBP15.58■□□□□ 0.08
CPSF1-211ENST00000533492 IFNKQ9P0W0 207 aa15.58■□□□□ 0.08
CPSF1-211ENST00000533492 IP6K2Q9UHH9 426 aa15.58■□□□□ 0.08
CPSF1-211ENST00000533492 KLF15Q9UIH9 416 aa15.58■□□□□ 0.08
CPSF1-211ENST00000533492 COQ6Q9Y2Z9 468 aa15.58■□□□□ 0.08
CPSF1-211ENST00000533492 FREM2Q5SZK8 3169 aa15.58■□□□□ 0.08
CPSF1-211ENST00000533492 FAM208BQ5VWN6 2430 aa15.57■□□□□ 0.08
CPSF1-211ENST00000533492 PKD1L2Q7Z442 2459 aa15.57■□□□□ 0.08
CPSF1-211ENST00000533492 TSPAN11A1L157 253 aa15.57■□□□□ 0.08
CPSF1-211ENST00000533492 RIOK3O14730 519 aaKnown RBP15.57■□□□□ 0.08
CPSF1-211ENST00000533492 MT-CO3P00414 261 aa15.57■□□□□ 0.08
CPSF1-211ENST00000533492 TPM3P06753 285 aa15.57■□□□□ 0.08
CPSF1-211ENST00000533492 MYF5P13349 255 aa15.57■□□□□ 0.08
CPSF1-211ENST00000533492 AMPD1P23109 780 aa15.57■□□□□ 0.08
CPSF1-211ENST00000533492 IL1R2P27930 398 aa15.57■□□□□ 0.08
CPSF1-211ENST00000533492 SSR1P43307 286 aaKnown RBP15.57■□□□□ 0.08
CPSF1-211ENST00000533492 RGRP47804 291 aa15.57■□□□□ 0.08
CPSF1-211ENST00000533492 LIG3P49916 1009 aa15.57■□□□□ 0.08
CPSF1-211ENST00000533492 POLR2LP62875 67 aaKnown RBP15.57■□□□□ 0.08
CPSF1-211ENST00000533492 DPYSQ14117 519 aa15.57■□□□□ 0.08
CPSF1-211ENST00000533492 DPYSL2Q16555 572 aa15.57■□□□□ 0.08
CPSF1-211ENST00000533492 CCDC122Q5T0U0 273 aa15.57■□□□□ 0.08
CPSF1-211ENST00000533492 ZCCHC8Q6NZY4 707 aaKnown RBP15.57■□□□□ 0.08
CPSF1-211ENST00000533492 C19orf48Q6RUI8 117 aa15.57■□□□□ 0.08
CPSF1-211ENST00000533492 TMCO3Q6UWJ1 677 aa15.57■□□□□ 0.08
CPSF1-211ENST00000533492 POLNQ7Z5Q5 900 aa15.57■□□□□ 0.08
CPSF1-211ENST00000533492 CACTIN-AS1Q8N1I8 211 aa15.57■□□□□ 0.08
CPSF1-211ENST00000533492 RFFLQ8WZ73 363 aa15.57■□□□□ 0.08
CPSF1-211ENST00000533492 NUP85Q9BW27 656 aa15.57■□□□□ 0.08
CPSF1-211ENST00000533492 NRSN2Q9GZP1 204 aa15.57■□□□□ 0.08
CPSF1-211ENST00000533492 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.57■□□□□ 0.08
CPSF1-211ENST00000533492 NCKIPSDQ9NZQ3 722 aa15.57■□□□□ 0.08
CPSF1-211ENST00000533492 SEPT3Q9UH03 358 aa15.57■□□□□ 0.08
CPSF1-211ENST00000533492 APOBEC3BQ9UH17 382 aaKnown RBP15.57■□□□□ 0.08
CPSF1-211ENST00000533492 ANAPC7Q9UJX3 599 aa15.57■□□□□ 0.08
CPSF1-211ENST00000533492 ATP8A1Q9Y2Q0 1164 aa15.57■□□□□ 0.08
CPSF1-211ENST00000533492 GPSM3Q9Y4H4 160 aa15.57■□□□□ 0.08
CPSF1-211ENST00000533492 APC2O95996 2303 aa15.57■□□□□ 0.08
CPSF1-211ENST00000533492 MYLKQ15746 1914 aa15.56■□□□□ 0.08
CPSF1-211ENST00000533492 DSPP15924 2871 aaKnown RBP15.56■□□□□ 0.08
CPSF1-211ENST00000533492 A0A087X0T9 212 aa15.56■□□□□ 0.08
CPSF1-211ENST00000533492 TMEM110-MUSTN1A8MSY1 372 aa15.56■□□□□ 0.08
CPSF1-211ENST00000533492 MYO1FO00160 1098 aa15.56■□□□□ 0.08
CPSF1-211ENST00000533492 PRKCGP05129 697 aa15.56■□□□□ 0.08
CPSF1-211ENST00000533492 FAM228BP0C875 321 aa15.56■□□□□ 0.08
CPSF1-211ENST00000533492 RARAP10276 462 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms