RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 TPGS1Q6ZTW0 290 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 ESPNLQ6ZVH7 1005 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 LARP4Q71RC2 724 aaKnown RBP eCLIP5.58□□□□□ -1.52
CD44-236ENST00000533222 NECAB2Q7Z6G3 386 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 GALNT5Q7Z7M9 940 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 TLK2Q86UE8 772 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 ZNF589Q86UQ0 364 aaPredicted RBP5.58□□□□□ -1.52
CD44-236ENST00000533222 DHX40Q8IX18 779 aaKnown RBP5.58□□□□□ -1.52
CD44-236ENST00000533222 CCDC36Q8IYA8 594 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 MAML2Q8IZL2 1156 aaPredicted RBP5.58□□□□□ -1.52
CD44-236ENST00000533222 ADSSL1Q8N142 457 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 CBARPQ8N350 705 aaPredicted RBP5.58□□□□□ -1.52
CD44-236ENST00000533222 ANKRD42Q8N9B4 389 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 IL17REQ8NFR9 667 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 OR7D4Q8NG98 312 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 FEZF2Q8TBJ5 459 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 LRRC8CQ8TDW0 803 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 TRUB1Q8WWH5 349 aaKnown RBP5.58□□□□□ -1.52
CD44-236ENST00000533222 WASF1Q92558 559 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 MBD6Q96DN6 1003 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 MTBPQ96DY7 904 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 ZDHHC12Q96GR4 267 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 ZNF317Q96PQ6 595 aaPredicted RBP5.58□□□□□ -1.52
CD44-236ENST00000533222 SMAD5Q99717 465 aaKnown RBP5.58□□□□□ -1.52
CD44-236ENST00000533222 KRTAP4-12Q9BQ66 201 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 C17orf80Q9BSJ5 609 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 MRPS26Q9BYN8 205 aaKnown RBP5.58□□□□□ -1.52
CD44-236ENST00000533222 KLC2Q9H0B6 622 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 SLC6A15Q9H2J7 730 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 TFB2MQ9H5Q4 396 aaKnown RBP5.58□□□□□ -1.52
CD44-236ENST00000533222 SLA2Q9H6Q3 261 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 C17orf75Q9HAS0 396 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 USP29Q9HBJ7 922 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 ZNF287Q9HBT7 754 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 TMBIM4Q9HC24 238 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 TM9SF3Q9HD45 589 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 MRPS30Q9NP92 439 aaKnown RBP5.58□□□□□ -1.52
CD44-236ENST00000533222 PARVAQ9NVD7 372 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 NMRK1Q9NWW6 199 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 NPAP1Q9NZP6 1156 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 IPO11Q9UI26 975 aaKnown RBP5.58□□□□□ -1.52
CD44-236ENST00000533222 TRHDEQ9UKU6 1024 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 TMPRSS11EQ9UL52 423 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 POLHQ9Y253 713 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 VWA7Q9Y334 891 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 UTP11Q9Y3A2 253 aaKnown RBP5.58□□□□□ -1.52
CD44-236ENST00000533222 MYH13Q9UKX3 1938 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 SYNJ2O15056 1496 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 DENND4BO75064 1496 aaPredicted RBP5.58□□□□□ -1.52
CD44-236ENST00000533222 WNK3Q9BYP7 1800 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 MED23Q9ULK4 1368 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 NRCAMQ92823 1304 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 MYH7P12883 1935 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 C15orf38-AP3S2A0A0A6YYH1 394 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 ESYT2A0FGR8 921 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 ARHGEF37A1IGU5 675 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 KLRG2A4D1S0 409 aaPredicted RBP5.57□□□□□ -1.52
CD44-236ENST00000533222 BTBD18B2RXH4 712 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 HSBP1L1C9JCN9 74 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 TOR1AO14656 332 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 VILLO15195 856 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 PLA2G6O60733 806 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 NOS1APO75052 506 aaPredicted RBP5.57□□□□□ -1.52
CD44-236ENST00000533222 PTP4A3O75365 173 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 CYP7B1O75881 506 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 RBBP9O75884 186 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 INMTO95050 263 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 MT-CO1P00395 513 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 CFBP00751 764 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 CRYABP02511 175 aaKnown RBP5.57□□□□□ -1.52
CD44-236ENST00000533222 CYP1A1P04798 512 aaPredicted RBP5.57□□□□□ -1.52
CD44-236ENST00000533222 PFKMP08237 780 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 GFAPP14136 432 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 NPR1P16066 1061 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 TYRP1P17643 537 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 CXCR2P25025 360 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 CSF2RBP32927 897 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 HADHAP40939 763 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 RECQLP46063 649 aaPredicted RBP5.57□□□□□ -1.52
CD44-236ENST00000533222 CDK9P50750 372 aaKnown RBP5.57□□□□□ -1.52
CD44-236ENST00000533222 AIF1P55008 147 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 RRADP55042 308 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 NPEPPSP55786 919 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 RNASE9P60153 205 aaKnown RBP5.57□□□□□ -1.52
CD44-236ENST00000533222 JAG1P78504 1218 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 TAP1Q03518 808 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 ITKQ08881 620 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 ASPHQ12797 758 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 RALGDSQ12967 914 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 TRIM25Q14258 630 aaKnown RBP5.57□□□□□ -1.52
CD44-236ENST00000533222 FASTKD3Q14CZ7 662 aaKnown RBP5.57□□□□□ -1.52
CD44-236ENST00000533222 EFTUD2Q15029 972 aaKnown RBP eCLIP5.57□□□□□ -1.52
CD44-236ENST00000533222 UGP2Q16851 508 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 ABCB5Q2M3G0 1257 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 EDRF1Q3B7T1 1238 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 RAB11FIP2Q7L804 512 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 LHFPL3Q86UP9 236 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 GALNT13Q8IUC8 556 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 TMEM126BQ8IUX1 230 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 TBC1D10CQ8IV04 446 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms