RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 PRAMEF26H0Y7S4 382 aa13.1□□□□□ -0.31
TRAPPC4-212ENST00000533058 J3KR12 359 aa13.1□□□□□ -0.31
TRAPPC4-212ENST00000533058 RNF103O00237 685 aa13.1□□□□□ -0.31
TRAPPC4-212ENST00000533058 GIPC1O14908 333 aa13.1□□□□□ -0.31
TRAPPC4-212ENST00000533058 FLRT2O43155 660 aa13.1□□□□□ -0.31
TRAPPC4-212ENST00000533058 PRAMEF11O60813 436 aa13.1□□□□□ -0.31
TRAPPC4-212ENST00000533058 CBFA2T3O75081 653 aa13.1□□□□□ -0.31
TRAPPC4-212ENST00000533058 TMCC1O94876 653 aa13.1□□□□□ -0.31
TRAPPC4-212ENST00000533058 TJP3O95049 919 aa13.1□□□□□ -0.31
TRAPPC4-212ENST00000533058 WNT1P04628 370 aa13.1□□□□□ -0.31
TRAPPC4-212ENST00000533058 ADRB3P13945 408 aa13.1□□□□□ -0.31
TRAPPC4-212ENST00000533058 TGM2P21980 687 aa13.1□□□□□ -0.31
TRAPPC4-212ENST00000533058 C21orf59P57076 290 aa13.1□□□□□ -0.31
TRAPPC4-212ENST00000533058 RAD51Q06609 339 aa13.1□□□□□ -0.31
TRAPPC4-212ENST00000533058 POM121L1PQ3SYA9 428 aa13.1□□□□□ -0.31
TRAPPC4-212ENST00000533058 HS1BP3Q53T59 392 aa13.1□□□□□ -0.31
TRAPPC4-212ENST00000533058 ZNF805Q5CZA5 627 aa13.1□□□□□ -0.31
TRAPPC4-212ENST00000533058 BZW1Q7L1Q6 419 aaKnown RBP13.1□□□□□ -0.31
TRAPPC4-212ENST00000533058 GLRX5Q86SX6 157 aa13.1□□□□□ -0.31
TRAPPC4-212ENST00000533058 LRRC49Q8IUZ0 686 aa13.1□□□□□ -0.31
TRAPPC4-212ENST00000533058 NAXDQ8IW45 347 aa13.1□□□□□ -0.31
TRAPPC4-212ENST00000533058 RYBPQ8N488 228 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC4-212ENST00000533058 FAM174AQ8TBP5 190 aa13.1□□□□□ -0.31
TRAPPC4-212ENST00000533058 HCAR2Q8TDS4 363 aa13.1□□□□□ -0.31
TRAPPC4-212ENST00000533058 GDAP1L1Q96MZ0 367 aa13.1□□□□□ -0.31
TRAPPC4-212ENST00000533058 TLR10Q9BXR5 811 aa13.1□□□□□ -0.31
TRAPPC4-212ENST00000533058 CPEB1Q9BZB8 566 aaKnown RBP13.1□□□□□ -0.31
TRAPPC4-212ENST00000533058 TM6SF2Q9BZW4 377 aa13.1□□□□□ -0.31
TRAPPC4-212ENST00000533058 AASDHPPTQ9NRN7 309 aa13.1□□□□□ -0.31
TRAPPC4-212ENST00000533058 DTLQ9NZJ0 730 aa13.1□□□□□ -0.31
TRAPPC4-212ENST00000533058 FADS3Q9Y5Q0 445 aa13.1□□□□□ -0.31
TRAPPC4-212ENST00000533058 NYNRINQ9P2P1 1898 aaKnown RBP13.1□□□□□ -0.31
TRAPPC4-212ENST00000533058 A0A1B0GTQ1 180 aa13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 TLR4O00206 839 aa13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 WNT9AO14904 365 aa13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 PPP1R12AO14974 1030 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 YKT6O15498 198 aa13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 TSPAN6O43657 245 aa13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 SH3BP5O60239 455 aa13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 CEP104O60308 925 aa13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 IGSF6O95976 241 aa13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 CXCR5P32302 372 aa13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 PTPN7P35236 360 aa13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 GARSP41250 739 aaKnown RBP13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 CCT8P50990 548 aa13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 NXPH1P58417 271 aa13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 RHOAP61586 193 aa13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 IL10RBQ08334 325 aa13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 GALNT2Q10471 571 aa13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 AP1B1Q10567 949 aa13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 SLC10A2Q12908 348 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 STAT4Q14765 748 aa13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 GRM3Q14832 879 aa13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 PDK1Q15118 436 aa13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 CYTH1Q15438 398 aa13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 TAZQ16635 292 aa13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 ZNF284Q2VY69 593 aa13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 TMEM259Q4ZIN3 620 aa13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 KIAA1161Q6NSJ0 714 aa13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 TIGD7Q6NT04 549 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 FBXL19Q6PCT2 694 aa13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 BBS12Q6ZW61 710 aa13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 BBS5Q8N3I7 341 aa13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 TMEM145Q8NBT3 493 aa13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 BAHD1Q8TBE0 780 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 LRRN4Q8WUT4 740 aa13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 ASB12Q8WXK4 309 aa13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 FEM1CQ96JP0 617 aa13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 ELF4Q99607 663 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 CINPQ9BW66 212 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 ZDHHC6Q9H6R6 413 aa13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 SEPT10Q9P0V9 454 aa13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 SAE1Q9UBE0 346 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 DKK3Q9UBP4 350 aa13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 PCOLCE2Q9UKZ9 415 aa13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 WASF3Q9UPY6 502 aa13.09□□□□□ -0.31
TRAPPC4-212ENST00000533058 CABIN1Q9Y6J0 2220 aa13.08□□□□□ -0.32
TRAPPC4-212ENST00000533058 ADAMTS9Q9P2N4 1935 aa13.08□□□□□ -0.32
TRAPPC4-212ENST00000533058 A0A1W2PQU0 124 aa13.08□□□□□ -0.32
TRAPPC4-212ENST00000533058 C16orf96A6NNT2 1141 aa13.08□□□□□ -0.32
TRAPPC4-212ENST00000533058 H0Y8X5 98 aa13.08□□□□□ -0.32
TRAPPC4-212ENST00000533058 H7C0C1 242 aa13.08□□□□□ -0.32
TRAPPC4-212ENST00000533058 KRIT1O00522 736 aa13.08□□□□□ -0.32
TRAPPC4-212ENST00000533058 MAFKO60675 156 aa13.08□□□□□ -0.32
TRAPPC4-212ENST00000533058 TRIM16O95361 564 aa13.08□□□□□ -0.32
TRAPPC4-212ENST00000533058 PECAM1P16284 738 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC4-212ENST00000533058 ATP5OP48047 213 aa13.08□□□□□ -0.32
TRAPPC4-212ENST00000533058 RXRGP48443 463 aa13.08□□□□□ -0.32
TRAPPC4-212ENST00000533058 CSNK1DP48730 415 aa13.08□□□□□ -0.32
TRAPPC4-212ENST00000533058 NR2C2P49116 596 aa13.08□□□□□ -0.32
TRAPPC4-212ENST00000533058 SUOXP51687 545 aa13.08□□□□□ -0.32
TRAPPC4-212ENST00000533058 RPS21P63220 83 aaKnown RBP13.08□□□□□ -0.32
TRAPPC4-212ENST00000533058 ADCY2Q08462 1091 aa13.08□□□□□ -0.32
TRAPPC4-212ENST00000533058 NSUN2Q08J23 767 aaKnown RBP eCLIP13.08□□□□□ -0.32
TRAPPC4-212ENST00000533058 ZNF235Q14590 738 aa13.08□□□□□ -0.32
TRAPPC4-212ENST00000533058 RFTN1Q14699 578 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC4-212ENST00000533058 LBRQ14739 615 aaKnown RBP13.08□□□□□ -0.32
TRAPPC4-212ENST00000533058 TRIP6Q15654 476 aaKnown RBP13.08□□□□□ -0.32
TRAPPC4-212ENST00000533058 TMCO4Q5TGY1 634 aa13.08□□□□□ -0.32
TRAPPC4-212ENST00000533058 LAYNQ6UX15 382 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms