RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 AADACL2Q6P093 401 aa14.07□□□□□ -0.16
TSPAN4-220ENST00000532375 BBS12Q6ZW61 710 aa14.07□□□□□ -0.16
TSPAN4-220ENST00000532375 PRPF39Q86UA1 669 aaKnown RBP14.07□□□□□ -0.16
TSPAN4-220ENST00000532375 CCDC13Q8IYE1 715 aa14.07□□□□□ -0.16
TSPAN4-220ENST00000532375 KLK6Q92876 244 aa14.07□□□□□ -0.16
TSPAN4-220ENST00000532375 PDLIM2Q96JY6 352 aa14.07□□□□□ -0.16
TSPAN4-220ENST00000532375 KLF6Q99612 283 aaPredicted RBP14.07□□□□□ -0.16
TSPAN4-220ENST00000532375 NT5MQ9NPB1 228 aa14.07□□□□□ -0.16
TSPAN4-220ENST00000532375 RBM22Q9NW64 420 aaKnown RBP eCLIP14.07□□□□□ -0.16
TSPAN4-220ENST00000532375 AMACRQ9UHK6 382 aa14.07□□□□□ -0.16
TSPAN4-220ENST00000532375 DMTF1Q9Y222 760 aa14.07□□□□□ -0.16
TSPAN4-220ENST00000532375 EFR3BQ9Y2G0 817 aa14.07□□□□□ -0.16
TSPAN4-220ENST00000532375 PCDHGC4Q9Y5F7 938 aa14.07□□□□□ -0.16
TSPAN4-220ENST00000532375 KCNK1O00180 336 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 RIOK3O14730 519 aaKnown RBP14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 VILLO15195 856 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 RAD51BO15315 384 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 TSPAN6O43657 245 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 FZD6O60353 706 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 PCDH8O95206 1070 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 JCHAINP01591 159 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 HLA-DQB2P05538 268 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 MMP2P08253 660 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 PRLRP16471 622 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 TGM2P21980 687 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 NUDT1P36639 197 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 CTSKP43235 329 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 MAPK8P45983 427 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 NR2C2P49116 596 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 SUOXP51687 545 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 COPS2P61201 443 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 DYNLT1P63172 113 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 TRAF2Q12933 501 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 PDK1Q15118 436 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 PRKD1Q15139 912 aaPredicted RBP14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 KIF19Q2TAC6 998 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 RALGPS1Q5JS13 557 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 KAZNQ674X7 775 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 NAPEPLDQ6IQ20 393 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 KIAA1161Q6NSJ0 714 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 BRAT1Q6PJG6 821 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 B4GALNT4Q76KP1 1039 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 TXLNBQ8N3L3 684 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 ASB12Q8WXK4 309 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 HES6Q96HZ4 224 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 RBM41Q96IZ5 413 aaKnown RBP14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 FEM1CQ96JP0 617 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 SERAC1Q96JX3 654 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 SEMA3CQ99985 751 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 HEMGNQ9BXL5 484 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 SLC17A9Q9BYT1 436 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 ATP13A3Q9H7F0 1226 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 PCDH12Q9NPG4 1184 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 TMEM9BQ9NQ34 198 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 AMFRQ9UKV5 643 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 PACSIN2Q9UNF0 486 aaPredicted RBP14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 CA5BQ9Y2D0 317 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 ANKRD6Q9Y2G4 727 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 SNX11Q9Y5W9 270 aa14.06□□□□□ -0.16
TSPAN4-220ENST00000532375 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.05□□□□□ -0.16
TSPAN4-220ENST00000532375 IGLON5A6NGN9 336 aa14.05□□□□□ -0.16
TSPAN4-220ENST00000532375 UPK3BL1B0FP48 263 aa14.05□□□□□ -0.16
TSPAN4-220ENST00000532375 UPK3BL2E5RIL1 263 aa14.05□□□□□ -0.16
TSPAN4-220ENST00000532375 SLC31A1O15431 190 aa14.05□□□□□ -0.16
TSPAN4-220ENST00000532375 SOCS5O75159 536 aa14.05□□□□□ -0.16
TSPAN4-220ENST00000532375 FTCDO95954 541 aa14.05□□□□□ -0.16
TSPAN4-220ENST00000532375 PAK4O96013 591 aaPredicted RBP14.05□□□□□ -0.16
TSPAN4-220ENST00000532375 PRLP01236 227 aa14.05□□□□□ -0.16
TSPAN4-220ENST00000532375 PRKCGP05129 697 aa14.05□□□□□ -0.16
TSPAN4-220ENST00000532375 CD38P28907 300 aa14.05□□□□□ -0.16
TSPAN4-220ENST00000532375 SERPINA4P29622 427 aa14.05□□□□□ -0.16
TSPAN4-220ENST00000532375 RWDD2BP57060 319 aa14.05□□□□□ -0.16
TSPAN4-220ENST00000532375 RPS21P63220 83 aaKnown RBP14.05□□□□□ -0.16
TSPAN4-220ENST00000532375 DSC2Q02487 901 aa14.05□□□□□ -0.16
TSPAN4-220ENST00000532375 BCL2L1Q07817 233 aa14.05□□□□□ -0.16
TSPAN4-220ENST00000532375 RALGDSQ12967 914 aa14.05□□□□□ -0.16
TSPAN4-220ENST00000532375 SETMARQ53H47 684 aaPredicted RBP14.05□□□□□ -0.16
TSPAN4-220ENST00000532375 PEX26Q7Z412 305 aa14.05□□□□□ -0.16
TSPAN4-220ENST00000532375 SYCE1Q8N0S2 351 aa14.05□□□□□ -0.16
TSPAN4-220ENST00000532375 CBARPQ8N350 705 aaPredicted RBP14.05□□□□□ -0.16
TSPAN4-220ENST00000532375 MINDY1Q8N5J2 469 aa14.05□□□□□ -0.16
TSPAN4-220ENST00000532375 MFSD2AQ8NA29 543 aa14.05□□□□□ -0.16
TSPAN4-220ENST00000532375 CCNYQ8ND76 341 aa14.05□□□□□ -0.16
TSPAN4-220ENST00000532375 NSMCE1Q8WV22 266 aa14.05□□□□□ -0.16
TSPAN4-220ENST00000532375 BMFQ96LC9 184 aa14.05□□□□□ -0.16
TSPAN4-220ENST00000532375 OSBPL8Q9BZF1 889 aa14.05□□□□□ -0.16
TSPAN4-220ENST00000532375 ZDHHC5Q9C0B5 715 aa14.05□□□□□ -0.16
TSPAN4-220ENST00000532375 BRD8Q9H0E9 1235 aa14.05□□□□□ -0.16
TSPAN4-220ENST00000532375 KCNF1Q9H3M0 494 aa14.05□□□□□ -0.16
TSPAN4-220ENST00000532375 IL21RQ9HBE5 538 aa14.05□□□□□ -0.16
TSPAN4-220ENST00000532375 SCUBE2Q9NQ36 999 aa14.05□□□□□ -0.16
TSPAN4-220ENST00000532375 DNAAF2Q9NVR5 837 aaKnown RBP14.05□□□□□ -0.16
TSPAN4-220ENST00000532375 GUCA1BQ9UMX6 200 aa14.05□□□□□ -0.16
TSPAN4-220ENST00000532375 PPIL1Q9Y3C6 166 aa14.05□□□□□ -0.16
TSPAN4-220ENST00000532375 ARID1BQ8NFD5 2236 aaPredicted RBP14.05□□□□□ -0.16
TSPAN4-220ENST00000532375 MIF4GDA9UHW6 222 aaKnown RBP14.04□□□□□ -0.16
TSPAN4-220ENST00000532375 PRAMEF26H0Y7S4 382 aa14.04□□□□□ -0.16
TSPAN4-220ENST00000532375 KCNK3O14649 394 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms