RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 RASSF8Q8NHQ8 419 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 ZKSCAN4Q969J2 545 aaPredicted RBP3.11□□□□□ -1.91
CD44-234ENST00000531873 SLC22A18Q96BI1 424 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 ELMOD3Q96FG2 381 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 NAF1Q96HR8 494 aaKnown RBP3.11□□□□□ -1.91
CD44-234ENST00000531873 PGAM5Q96HS1 289 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 CLMNQ96JQ2 1002 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 BBS4Q96RK4 519 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 ABHD1Q96SE0 405 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 FIZ1Q96SL8 496 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 BAG1Q99933 345 aaPredicted RBP3.11□□□□□ -1.91
CD44-234ENST00000531873 DUSP26Q9BV47 211 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 C1QTNF5Q9BXJ0 243 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 SPAG4Q9NPE6 437 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 DDX4Q9NQI0 724 aaKnown RBP3.11□□□□□ -1.91
CD44-234ENST00000531873 SEMA4GQ9NTN9 838 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 SETD4Q9NVD3 440 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 DLGAP2Q9P1A6 1054 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 FBXL17Q9UF56 701 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 CNOT8Q9UFF9 292 aaKnown RBP3.11□□□□□ -1.91
CD44-234ENST00000531873 PADI1Q9ULC6 663 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 LAMP3Q9UQV4 416 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 CARD8Q9Y2G2 431 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 SESN1Q9Y6P5 492 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 A0A087X1B8 175 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 A0A1W2PR77 199 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 OR2A25A4D2G3 310 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 TMEM191CA6NGB0 347 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 TTC36A6NLP5 189 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 A8MV72 311 aaPredicted RBP3.1□□□□□ -1.91
CD44-234ENST00000531873 H7C0S8 307 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 RHODO00212 210 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 SCAMP1O15126 338 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 RNMTO43148 476 aaKnown RBP3.1□□□□□ -1.91
CD44-234ENST00000531873 PAPSS1O43252 624 aaPredicted RBP3.1□□□□□ -1.91
CD44-234ENST00000531873 SEC14L5O43304 696 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 HCRTR2O43614 444 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 RNF8O76064 485 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 NKX2-2O95096 273 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 CLDN7O95471 211 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 TOP3BO95985 862 aaKnown RBP3.1□□□□□ -1.91
CD44-234ENST00000531873 GCP02774 474 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 KRT10P13645 584 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 IL7RP16871 459 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 SHMT1P34896 483 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 NRIP1P48552 1158 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 PTH2RP49190 550 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 CLCN3P51790 818 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 NANOS3P60323 173 aaKnown RBP3.1□□□□□ -1.91
CD44-234ENST00000531873 ROR1Q01973 937 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 COL10A1Q03692 680 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 CALD1Q05682 793 aaKnown RBP3.1□□□□□ -1.91
CD44-234ENST00000531873 PMPCAQ10713 525 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 RUNX2Q13950 521 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 HIST2H2ACQ16777 129 aaPredicted RBP3.1□□□□□ -1.91
CD44-234ENST00000531873 TMEM119Q4V9L6 283 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 BMP2KLQ5H9B9 411 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 EARS2Q5JPH6 523 aaKnown RBP3.1□□□□□ -1.91
CD44-234ENST00000531873 ENTPD8Q5MY95 495 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 PAPD7Q5XG87 772 aaKnown RBP3.1□□□□□ -1.91
CD44-234ENST00000531873 PMS2CLQ68D20 193 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 FCRLBQ6BAA4 426 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 SUMO4Q6EEV6 95 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 NAA16Q6N069 864 aaPredicted RBP3.1□□□□□ -1.91
CD44-234ENST00000531873 LCTLQ6UWM7 567 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 OLFML1Q6UWY5 402 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 ZNF66Q6ZN08 573 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 ANKRD23Q86SG2 305 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 ADGRA1Q86SQ6 560 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 SERPINA11Q86U17 422 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 TICAM1Q8IUC6 712 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 SLC35F3Q8IY50 421 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 FAM98AQ8NCA5 519 aaKnown RBP3.1□□□□□ -1.91
CD44-234ENST00000531873 MCPH1Q8NEM0 835 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 SNAPC3Q92966 411 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 JAKMIP2Q96AA8 810 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 EME1Q96AY2 570 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 ARHGEF26Q96DR7 871 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 ZNF419Q96HQ0 510 aaPredicted RBP3.1□□□□□ -1.91
CD44-234ENST00000531873 PPP1R13BQ96KQ4 1090 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 PRRX2Q99811 253 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 MXRA8Q9BRK3 442 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 SCNM1Q9BWG6 230 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 NDST4Q9H3R1 872 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 MVB12BQ9H7P6 319 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 ZCCHC17Q9NP64 241 aaKnown RBP3.1□□□□□ -1.91
CD44-234ENST00000531873 LTB4R2Q9NPC1 389 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 MRPL15Q9P015 296 aaKnown RBP3.1□□□□□ -1.91
CD44-234ENST00000531873 MORF4L1Q9UBU8 362 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 CFDP1Q9UEE9 299 aaPredicted RBP3.1□□□□□ -1.91
CD44-234ENST00000531873 IPO11Q9UI26 975 aaKnown RBP3.1□□□□□ -1.91
CD44-234ENST00000531873 UTS2RQ9UKP6 389 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 NENFQ9UMX5 172 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 MTMR6Q9Y217 621 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 AAR2Q9Y312 384 aaKnown RBP3.1□□□□□ -1.91
CD44-234ENST00000531873 FAM96BQ9Y3D0 163 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 MAGED1Q9Y5V3 778 aaPredicted RBP3.1□□□□□ -1.91
CD44-234ENST00000531873 A3GALT2U3KPV4 340 aa3.1□□□□□ -1.91
CD44-234ENST00000531873 A0A0G2JK05 382 aa3.09□□□□□ -1.91
CD44-234ENST00000531873 LRRC3CA6NJW4 275 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms