RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 FOXJ2Q9P0K8 574 aa9.35□□□□□ -0.91
NEDD8-206ENST00000531430 ANKMY1Q9P2S6 941 aa9.35□□□□□ -0.91
NEDD8-206ENST00000531430 LRIT1Q9P2V4 623 aa9.35□□□□□ -0.91
NEDD8-206ENST00000531430 KLQ9UEF7 1012 aa9.35□□□□□ -0.91
NEDD8-206ENST00000531430 DNAJC12Q9UKB3 198 aa9.35□□□□□ -0.91
NEDD8-206ENST00000531430 PCDHGC3Q9UN70 934 aa9.35□□□□□ -0.91
NEDD8-206ENST00000531430 OR1A2Q9Y585 309 aa9.35□□□□□ -0.91
NEDD8-206ENST00000531430 PCDHGA4Q9Y5G9 962 aa9.35□□□□□ -0.91
NEDD8-206ENST00000531430 RNF215Q9Y6U7 377 aa9.35□□□□□ -0.91
NEDD8-206ENST00000531430 TMEM110-MUSTN1A8MSY1 372 aa9.34□□□□□ -0.91
NEDD8-206ENST00000531430 B4DGG1 531 aa9.34□□□□□ -0.91
NEDD8-206ENST00000531430 FOXN3O00409 490 aaPredicted RBP9.34□□□□□ -0.91
NEDD8-206ENST00000531430 CD160O95971 181 aa9.34□□□□□ -0.91
NEDD8-206ENST00000531430 WT1P19544 449 aaPredicted RBP9.34□□□□□ -0.91
NEDD8-206ENST00000531430 ALDH4A1P30038 563 aa9.34□□□□□ -0.91
NEDD8-206ENST00000531430 CDO1Q16878 200 aa9.34□□□□□ -0.91
NEDD8-206ENST00000531430 EXOC3L4Q17RC7 722 aa9.34□□□□□ -0.91
NEDD8-206ENST00000531430 MAP9Q49MG5 647 aa9.34□□□□□ -0.91
NEDD8-206ENST00000531430 CFAP58Q5T655 872 aa9.34□□□□□ -0.91
NEDD8-206ENST00000531430 TRIM65Q6PJ69 517 aa9.34□□□□□ -0.91
NEDD8-206ENST00000531430 LVRNQ6Q4G3 990 aa9.34□□□□□ -0.91
NEDD8-206ENST00000531430 ZDHHC17Q8IUH5 632 aa9.34□□□□□ -0.91
NEDD8-206ENST00000531430 SFTPA2Q8IWL1 248 aa9.34□□□□□ -0.91
NEDD8-206ENST00000531430 IL22RA1Q8N6P7 574 aa9.34□□□□□ -0.91
NEDD8-206ENST00000531430 TP53I13Q8NBR0 393 aaPredicted RBP9.34□□□□□ -0.91
NEDD8-206ENST00000531430 TMEM35BQ8NCS4 154 aa9.34□□□□□ -0.91
NEDD8-206ENST00000531430 ZNF397Q8NF99 534 aaPredicted RBP9.34□□□□□ -0.91
NEDD8-206ENST00000531430 OR6C4Q8NGE1 309 aa9.34□□□□□ -0.91
NEDD8-206ENST00000531430 ARHGEF2Q92974 986 aaKnown RBP9.34□□□□□ -0.91
NEDD8-206ENST00000531430 ISG20Q96AZ6 181 aaKnown RBP9.34□□□□□ -0.91
NEDD8-206ENST00000531430 CFAP57Q96MR6 1250 aa9.34□□□□□ -0.91
NEDD8-206ENST00000531430 HAPLN3Q96S86 360 aa9.34□□□□□ -0.91
NEDD8-206ENST00000531430 OSBPL1AQ9BXW6 950 aa9.34□□□□□ -0.91
NEDD8-206ENST00000531430 MAGEB5Q9BZ81 275 aa9.34□□□□□ -0.91
NEDD8-206ENST00000531430 SEMA6CQ9H3T2 930 aa9.34□□□□□ -0.91
NEDD8-206ENST00000531430 RDH14Q9HBH5 336 aa9.34□□□□□ -0.91
NEDD8-206ENST00000531430 ZNF71Q9NQZ8 489 aaPredicted RBP9.34□□□□□ -0.91
NEDD8-206ENST00000531430 NDFIP2Q9NV92 336 aa9.34□□□□□ -0.91
NEDD8-206ENST00000531430 APEX2Q9UBZ4 518 aa9.34□□□□□ -0.91
NEDD8-206ENST00000531430 OR12D3Q9UGF7 316 aa9.34□□□□□ -0.91
NEDD8-206ENST00000531430 PTPN13Q12923 2485 aa9.34□□□□□ -0.91
NEDD8-206ENST00000531430 IGLV3-10A0A075B6K4 115 aa9.33□□□□□ -0.92
NEDD8-206ENST00000531430 AREL1O15033 823 aa9.33□□□□□ -0.92
NEDD8-206ENST00000531430 INSIG1O15503 277 aa9.33□□□□□ -0.92
NEDD8-206ENST00000531430 IGSF6O95976 241 aa9.33□□□□□ -0.92
NEDD8-206ENST00000531430 GSRP00390 522 aa9.33□□□□□ -0.92
NEDD8-206ENST00000531430 PRKCGP05129 697 aa9.33□□□□□ -0.92
NEDD8-206ENST00000531430 CCL4P13236 92 aa9.33□□□□□ -0.92
NEDD8-206ENST00000531430 GLB1P16278 677 aa9.33□□□□□ -0.92
NEDD8-206ENST00000531430 CCKBRP32239 447 aa9.33□□□□□ -0.92
NEDD8-206ENST00000531430 CLCN1P35523 988 aa9.33□□□□□ -0.92
NEDD8-206ENST00000531430 FLT3P36888 993 aa9.33□□□□□ -0.92
NEDD8-206ENST00000531430 ETFBP38117 255 aa9.33□□□□□ -0.92
NEDD8-206ENST00000531430 MTIF2P46199 727 aaKnown RBP9.33□□□□□ -0.92
NEDD8-206ENST00000531430 PEX5P50542 639 aa9.33□□□□□ -0.92
NEDD8-206ENST00000531430 GEMIN4P57678 1058 aaKnown RBP9.33□□□□□ -0.92
NEDD8-206ENST00000531430 RHOAP61586 193 aa9.33□□□□□ -0.92
NEDD8-206ENST00000531430 C1QBPQ07021 282 aaKnown RBP9.33□□□□□ -0.92
NEDD8-206ENST00000531430 PAK1Q13153 545 aa9.33□□□□□ -0.92
NEDD8-206ENST00000531430 NFATC4Q14934 902 aa9.33□□□□□ -0.92
NEDD8-206ENST00000531430 NCAPHQ15003 741 aa9.33□□□□□ -0.92
NEDD8-206ENST00000531430 WSCD2Q2TBF2 565 aa9.33□□□□□ -0.92
NEDD8-206ENST00000531430 C4orf17Q53FE4 359 aa9.33□□□□□ -0.92
NEDD8-206ENST00000531430 ACBD5Q5T8D3 534 aaPredicted RBP9.33□□□□□ -0.92
NEDD8-206ENST00000531430 PIM3Q86V86 326 aa9.33□□□□□ -0.92
NEDD8-206ENST00000531430 IRF2BP1Q8IU81 584 aa9.33□□□□□ -0.92
NEDD8-206ENST00000531430 ATL2Q8NHH9 583 aa9.33□□□□□ -0.92
NEDD8-206ENST00000531430 SPATA20Q8TB22 786 aa9.33□□□□□ -0.92
NEDD8-206ENST00000531430 HTR3CQ8WXA8 447 aa9.33□□□□□ -0.92
NEDD8-206ENST00000531430 HMCESQ96FZ2 354 aa9.33□□□□□ -0.92
NEDD8-206ENST00000531430 EXOC2Q96KP1 924 aa9.33□□□□□ -0.92
NEDD8-206ENST00000531430 TBATAQ96M53 351 aa9.33□□□□□ -0.92
NEDD8-206ENST00000531430 WDR92Q96MX6 357 aa9.33□□□□□ -0.92
NEDD8-206ENST00000531430 GDAP1L1Q96MZ0 367 aa9.33□□□□□ -0.92
NEDD8-206ENST00000531430 SEMA3CQ99985 751 aa9.33□□□□□ -0.92
NEDD8-206ENST00000531430 MRPL40Q9NQ50 206 aaKnown RBP9.33□□□□□ -0.92
NEDD8-206ENST00000531430 GEMIN8Q9NWZ8 242 aaKnown RBP9.33□□□□□ -0.92
NEDD8-206ENST00000531430 ZFC3H1O60293 1989 aaKnown RBP9.32□□□□□ -0.92
NEDD8-206ENST00000531430 TLN1Q9Y490 2541 aaKnown RBP9.32□□□□□ -0.92
NEDD8-206ENST00000531430 RHPN2P1A8MT19 583 aa9.32□□□□□ -0.92
NEDD8-206ENST00000531430 A8MX80 341 aa9.32□□□□□ -0.92
NEDD8-206ENST00000531430 C9orf172C9J069 976 aa9.32□□□□□ -0.92
NEDD8-206ENST00000531430 PES1O00541 588 aaKnown RBP9.32□□□□□ -0.92
NEDD8-206ENST00000531430 TOR1BO14657 336 aa9.32□□□□□ -0.92
NEDD8-206ENST00000531430 TEX33O43247 280 aa9.32□□□□□ -0.92
NEDD8-206ENST00000531430 KDELR3O43731 214 aa9.32□□□□□ -0.92
NEDD8-206ENST00000531430 RAMP2O60895 175 aa9.32□□□□□ -0.92
NEDD8-206ENST00000531430 TMCC1O94876 653 aa9.32□□□□□ -0.92
NEDD8-206ENST00000531430 PIGNO95427 931 aa9.32□□□□□ -0.92
NEDD8-206ENST00000531430 NTRK1P04629 796 aa9.32□□□□□ -0.92
NEDD8-206ENST00000531430 BMP6P22004 513 aa9.32□□□□□ -0.92
NEDD8-206ENST00000531430 MPSTP25325 297 aa9.32□□□□□ -0.92
NEDD8-206ENST00000531430 PON1P27169 355 aa9.32□□□□□ -0.92
NEDD8-206ENST00000531430 CCR10P46092 362 aa9.32□□□□□ -0.92
NEDD8-206ENST00000531430 LIG3P49916 1009 aa9.32□□□□□ -0.92
NEDD8-206ENST00000531430 ATP1A2P50993 1020 aa9.32□□□□□ -0.92
NEDD8-206ENST00000531430 OR1D5P58170 312 aa9.32□□□□□ -0.92
NEDD8-206ENST00000531430 BPIFB4P59827 614 aa9.32□□□□□ -0.92
NEDD8-206ENST00000531430 RAPGEF1Q13905 1077 aa9.32□□□□□ -0.92
NEDD8-206ENST00000531430 TPD52L1Q16890 204 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms