RNA–Protein interactions for RNA: ENST00000531352.5

ACER3-210, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 2,093 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-210ENST00000531352 MMP2P08253 660 aa11.78□□□□□ -0.52
ACER3-210ENST00000531352 IFI35P80217 286 aaPredicted RBP11.78□□□□□ -0.52
ACER3-210ENST00000531352 WASHC5Q12768 1159 aa11.78□□□□□ -0.52
ACER3-210ENST00000531352 SFSWAPQ12872 951 aaKnown RBP11.78□□□□□ -0.52
ACER3-210ENST00000531352 TRAF2Q12933 501 aa11.78□□□□□ -0.52
ACER3-210ENST00000531352 SIX1Q15475 284 aaPredicted RBP11.78□□□□□ -0.52
ACER3-210ENST00000531352 PEAR1Q5VY43 1037 aaPredicted RBP11.78□□□□□ -0.52
ACER3-210ENST00000531352 SEL1L3Q68CR1 1132 aa11.78□□□□□ -0.52
ACER3-210ENST00000531352 ALG1LQ6GMV1 187 aa11.78□□□□□ -0.52
ACER3-210ENST00000531352 SYT12Q8IV01 421 aa11.78□□□□□ -0.52
ACER3-210ENST00000531352 AGAP3Q96P47 875 aa11.78□□□□□ -0.52
ACER3-210ENST00000531352 TUBGCP5Q96RT8 1024 aa11.78□□□□□ -0.52
ACER3-210ENST00000531352 MIR1-1HGQ9H1L0 117 aa11.78□□□□□ -0.52
ACER3-210ENST00000531352 ATP13A3Q9H7F0 1226 aa11.78□□□□□ -0.52
ACER3-210ENST00000531352 SCUBE2Q9NQ36 999 aa11.78□□□□□ -0.52
ACER3-210ENST00000531352 DKK3Q9UBP4 350 aa11.78□□□□□ -0.52
ACER3-210ENST00000531352 PCDHGA5Q9Y5G8 931 aa11.78□□□□□ -0.52
ACER3-210ENST00000531352 MEI4A8MW99 385 aa11.77□□□□□ -0.52
ACER3-210ENST00000531352 AREL1O15033 823 aa11.77□□□□□ -0.52
ACER3-210ENST00000531352 LATO43561 262 aa11.77□□□□□ -0.52
ACER3-210ENST00000531352 PCDH8O95206 1070 aa11.77□□□□□ -0.52
ACER3-210ENST00000531352 PDHA1P08559 390 aa11.77□□□□□ -0.52
ACER3-210ENST00000531352 PTPN3P26045 913 aa11.77□□□□□ -0.52
ACER3-210ENST00000531352 HSPA9P38646 679 aaKnown RBP11.77□□□□□ -0.52
ACER3-210ENST00000531352 AP1S1P61966 158 aa11.77□□□□□ -0.52
ACER3-210ENST00000531352 IRX4P78413 519 aa11.77□□□□□ -0.52
ACER3-210ENST00000531352 BCL2L1Q07817 233 aa11.77□□□□□ -0.52
ACER3-210ENST00000531352 UGP2Q16851 508 aa11.77□□□□□ -0.52
ACER3-210ENST00000531352 CCDC181Q5TID7 509 aa11.77□□□□□ -0.52
ACER3-210ENST00000531352 LAYNQ6UX15 382 aa11.77□□□□□ -0.52
ACER3-210ENST00000531352 KDM7AQ6ZMT4 941 aa11.77□□□□□ -0.52
ACER3-210ENST00000531352 BBS5Q8N3I7 341 aa11.77□□□□□ -0.52
ACER3-210ENST00000531352 ZCCHC9Q8N567 271 aaKnown RBP11.77□□□□□ -0.52
ACER3-210ENST00000531352 TFB1MQ8WVM0 346 aaKnown RBP11.77□□□□□ -0.52
ACER3-210ENST00000531352 ZNF641Q96N77 438 aaPredicted RBP11.77□□□□□ -0.52
ACER3-210ENST00000531352 POLR1EQ9GZS1 481 aaKnown RBP11.77□□□□□ -0.52
ACER3-210ENST00000531352 BRD8Q9H0E9 1235 aa11.77□□□□□ -0.52
ACER3-210ENST00000531352 PCED1AQ9H1Q7 454 aa11.77□□□□□ -0.52
ACER3-210ENST00000531352 KDM4CQ9H3R0 1056 aa11.77□□□□□ -0.52
ACER3-210ENST00000531352 TMEM131Q92545 1883 aa11.77□□□□□ -0.53
ACER3-210ENST00000531352 A0A1W2PQU0 124 aa11.77□□□□□ -0.53
ACER3-210ENST00000531352 TSPAN11A1L157 253 aa11.77□□□□□ -0.53
ACER3-210ENST00000531352 HTRA2O43464 458 aaPredicted RBP11.77□□□□□ -0.53
ACER3-210ENST00000531352 GDF9O60383 454 aa11.77□□□□□ -0.53
ACER3-210ENST00000531352 RNGTTO60942 597 aaKnown RBP11.77□□□□□ -0.53
ACER3-210ENST00000531352 TJP3O95049 919 aa11.77□□□□□ -0.53
ACER3-210ENST00000531352 ZNF806P0C7X5 589 aa11.77□□□□□ -0.53
ACER3-210ENST00000531352 RBL1P28749 1068 aa11.77□□□□□ -0.53
ACER3-210ENST00000531352 SERPINA4P29622 427 aa11.77□□□□□ -0.53
ACER3-210ENST00000531352 CD68P34810 354 aaPredicted RBP11.77□□□□□ -0.53
ACER3-210ENST00000531352 GDF10P55107 478 aa11.77□□□□□ -0.53
ACER3-210ENST00000531352 GNG11P61952 73 aa11.77□□□□□ -0.53
ACER3-210ENST00000531352 FGL2Q14314 439 aa11.77□□□□□ -0.53
ACER3-210ENST00000531352 GRM3Q14832 879 aa11.77□□□□□ -0.53
ACER3-210ENST00000531352 ZNF284Q2VY69 593 aa11.77□□□□□ -0.53
ACER3-210ENST00000531352 TEX44Q53QW1 395 aa11.77□□□□□ -0.53
ACER3-210ENST00000531352 SYCP2LQ5T4T6 812 aa11.77□□□□□ -0.53
ACER3-210ENST00000531352 BZW1Q7L1Q6 419 aaKnown RBP11.77□□□□□ -0.53
ACER3-210ENST00000531352 PDCD6IPQ8WUM4 868 aaKnown RBP11.77□□□□□ -0.53
ACER3-210ENST00000531352 C1orf54Q8WWF1 131 aa11.77□□□□□ -0.53
ACER3-210ENST00000531352 PCDH12Q9NPG4 1184 aa11.77□□□□□ -0.53
ACER3-210ENST00000531352 PCDHB9Q9Y5E1 797 aa11.77□□□□□ -0.53
ACER3-210ENST00000531352 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.77□□□□□ -0.53
ACER3-210ENST00000531352 SPTBN2O15020 2390 aa11.77□□□□□ -0.53
ACER3-210ENST00000531352 TP53BP1Q12888 1972 aaPredicted RBP11.77□□□□□ -0.53
ACER3-210ENST00000531352 PCDH15Q96QU1 1955 aa11.77□□□□□ -0.53
ACER3-210ENST00000531352 TDRD6O60522 2096 aaKnown RBP11.76□□□□□ -0.53
ACER3-210ENST00000531352 A0A1W2PPC4 97 aa11.76□□□□□ -0.53
ACER3-210ENST00000531352 SLC31A1O15431 190 aa11.76□□□□□ -0.53
ACER3-210ENST00000531352 AP1G1O43747 822 aa11.76□□□□□ -0.53
ACER3-210ENST00000531352 CEP104O60308 925 aa11.76□□□□□ -0.53
ACER3-210ENST00000531352 PRLP01236 227 aa11.76□□□□□ -0.53
ACER3-210ENST00000531352 RBP3P10745 1247 aa11.76□□□□□ -0.53
ACER3-210ENST00000531352 PRLRP16471 622 aa11.76□□□□□ -0.53
ACER3-210ENST00000531352 CD27P26842 260 aa11.76□□□□□ -0.53
ACER3-210ENST00000531352 SNX1Q13596 522 aa11.76□□□□□ -0.53
ACER3-210ENST00000531352 CSRP2Q16527 193 aa11.76□□□□□ -0.53
ACER3-210ENST00000531352 TMEM259Q4ZIN3 620 aa11.76□□□□□ -0.53
ACER3-210ENST00000531352 SLC45A4Q5BKX6 768 aa11.76□□□□□ -0.53
ACER3-210ENST00000531352 WDR45BQ5MNZ6 344 aa11.76□□□□□ -0.53
ACER3-210ENST00000531352 PRPF39Q86UA1 669 aaKnown RBP11.76□□□□□ -0.53
ACER3-210ENST00000531352 HORMAD1Q86X24 394 aa11.76□□□□□ -0.53
ACER3-210ENST00000531352 SLC13A5Q86YT5 568 aaPredicted RBP11.76□□□□□ -0.53
ACER3-210ENST00000531352 KIAA2013Q8IYS2 634 aa11.76□□□□□ -0.53
ACER3-210ENST00000531352 ZNF567Q8N184 647 aa11.76□□□□□ -0.53
ACER3-210ENST00000531352 TAB3Q8N5C8 712 aaPredicted RBP11.76□□□□□ -0.53
ACER3-210ENST00000531352 SPATA22Q8NHS9 363 aa11.76□□□□□ -0.53
ACER3-210ENST00000531352 TEKT5Q96M29 485 aa11.76□□□□□ -0.53
ACER3-210ENST00000531352 QKIQ96PU8 341 aaKnown RBP eCLIP11.76□□□□□ -0.53
ACER3-210ENST00000531352 CARD9Q9H257 536 aa11.76□□□□□ -0.53
ACER3-210ENST00000531352 PREBQ9HCU5 417 aa11.76□□□□□ -0.53
ACER3-210ENST00000531352 AMACRQ9UHK6 382 aa11.76□□□□□ -0.53
ACER3-210ENST00000531352 DNPEPQ9ULA0 475 aa11.76□□□□□ -0.53
ACER3-210ENST00000531352 CA5BQ9Y2D0 317 aa11.76□□□□□ -0.53
ACER3-210ENST00000531352 RAI2Q9Y5P3 530 aa11.76□□□□□ -0.53
ACER3-210ENST00000531352 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.75□□□□□ -0.53
ACER3-210ENST00000531352 IGLON5A6NGN9 336 aa11.75□□□□□ -0.53
ACER3-210ENST00000531352 GOLGA8CPA6NN73 597 aa11.75□□□□□ -0.53
ACER3-210ENST00000531352 A8MX80 341 aa11.75□□□□□ -0.53
ACER3-210ENST00000531352 UPK3BL1B0FP48 263 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms