RNA–Protein interactions for RNA: ENST00000531226.5

PACSIN3-208, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-208ENST00000531226 MIF4GDA9UHW6 222 aaKnown RBP19.19■□□□□ 0.66
PACSIN3-208ENST00000531226 UPK3BL1B0FP48 263 aa19.19■□□□□ 0.66
PACSIN3-208ENST00000531226 UPK3BL2E5RIL1 263 aa19.19■□□□□ 0.66
PACSIN3-208ENST00000531226 TRAFD1O14545 582 aaPredicted RBP19.19■□□□□ 0.66
PACSIN3-208ENST00000531226 SOCS5O75159 536 aa19.19■□□□□ 0.66
PACSIN3-208ENST00000531226 FTCDO95954 541 aa19.19■□□□□ 0.66
PACSIN3-208ENST00000531226 PECAM1P16284 738 aaPredicted RBP19.19■□□□□ 0.66
PACSIN3-208ENST00000531226 XPAP23025 273 aaPredicted RBP19.19■□□□□ 0.66
PACSIN3-208ENST00000531226 PTPN7P35236 360 aa19.19■□□□□ 0.66
PACSIN3-208ENST00000531226 CSNK1EP49674 416 aaKnown RBP19.19■□□□□ 0.66
PACSIN3-208ENST00000531226 RPS21P63220 83 aaKnown RBP19.19■□□□□ 0.66
PACSIN3-208ENST00000531226 IFI35P80217 286 aaPredicted RBP19.19■□□□□ 0.66
PACSIN3-208ENST00000531226 GRIK2Q13002 908 aa19.19■□□□□ 0.66
PACSIN3-208ENST00000531226 UGP2Q16851 508 aa19.19■□□□□ 0.66
PACSIN3-208ENST00000531226 RSPO4Q2I0M5 234 aaPredicted RBP19.19■□□□□ 0.66
PACSIN3-208ENST00000531226 LRRC73Q5JTD7 316 aa19.19■□□□□ 0.66
PACSIN3-208ENST00000531226 STPG1Q5TH74 334 aa19.19■□□□□ 0.66
PACSIN3-208ENST00000531226 SEL1L3Q68CR1 1132 aa19.19■□□□□ 0.66
PACSIN3-208ENST00000531226 BBS12Q6ZW61 710 aa19.19■□□□□ 0.66
PACSIN3-208ENST00000531226 BZW1Q7L1Q6 419 aaKnown RBP19.19■□□□□ 0.66
PACSIN3-208ENST00000531226 ZSWIM9Q86XI8 627 aa19.19■□□□□ 0.66
PACSIN3-208ENST00000531226 ANP32BQ92688 251 aaKnown RBP19.19■□□□□ 0.66
PACSIN3-208ENST00000531226 FEM1CQ96JP0 617 aa19.19■□□□□ 0.66
PACSIN3-208ENST00000531226 SERAC1Q96JX3 654 aa19.19■□□□□ 0.66
PACSIN3-208ENST00000531226 ZDHHC5Q9C0B5 715 aa19.19■□□□□ 0.66
PACSIN3-208ENST00000531226 POLR1EQ9GZS1 481 aaKnown RBP19.19■□□□□ 0.66
PACSIN3-208ENST00000531226 BRD8Q9H0E9 1235 aa19.19■□□□□ 0.66
PACSIN3-208ENST00000531226 NOD2Q9HC29 1040 aa19.19■□□□□ 0.66
PACSIN3-208ENST00000531226 TMEM9BQ9NQ34 198 aa19.19■□□□□ 0.66
PACSIN3-208ENST00000531226 RBM22Q9NW64 420 aaKnown RBP eCLIP19.19■□□□□ 0.66
PACSIN3-208ENST00000531226 PACSIN2Q9UNF0 486 aaPredicted RBP19.19■□□□□ 0.66
PACSIN3-208ENST00000531226 TDRD6O60522 2096 aaKnown RBP19.18■□□□□ 0.66
PACSIN3-208ENST00000531226 DMXL1Q9Y485 3027 aa19.18■□□□□ 0.66
PACSIN3-208ENST00000531226 LAMA1P25391 3075 aa19.18■□□□□ 0.66
PACSIN3-208ENST00000531226 KCNK1O00180 336 aa19.18■□□□□ 0.66
PACSIN3-208ENST00000531226 NEMP1O14524 444 aa19.18■□□□□ 0.66
PACSIN3-208ENST00000531226 CDX4O14627 284 aaPredicted RBP19.18■□□□□ 0.66
PACSIN3-208ENST00000531226 NEBLO76041 1014 aa19.18■□□□□ 0.66
PACSIN3-208ENST00000531226 HLA-DQB2P05538 268 aa19.18■□□□□ 0.66
PACSIN3-208ENST00000531226 SDHBP21912 280 aa19.18■□□□□ 0.66
PACSIN3-208ENST00000531226 ATXN3P54252 364 aaPredicted RBP19.18■□□□□ 0.66
PACSIN3-208ENST00000531226 ELP6Q0PNE2 266 aa19.18■□□□□ 0.66
PACSIN3-208ENST00000531226 AP1B1Q10567 949 aa19.18■□□□□ 0.66
PACSIN3-208ENST00000531226 LAYNQ6UX15 382 aa19.18■□□□□ 0.66
PACSIN3-208ENST00000531226 UBL4BQ8N7F7 174 aa19.18■□□□□ 0.66
PACSIN3-208ENST00000531226 P3H4Q92791 437 aa19.18■□□□□ 0.66
PACSIN3-208ENST00000531226 KLK6Q92876 244 aa19.18■□□□□ 0.66
PACSIN3-208ENST00000531226 IL12RB2Q99665 862 aa19.18■□□□□ 0.66
PACSIN3-208ENST00000531226 SEMA3CQ99985 751 aa19.18■□□□□ 0.66
PACSIN3-208ENST00000531226 GTPBP2Q9BX10 602 aaKnown RBP19.18■□□□□ 0.66
PACSIN3-208ENST00000531226 OSBPL8Q9BZF1 889 aa19.18■□□□□ 0.66
PACSIN3-208ENST00000531226 AASDHPPTQ9NRN7 309 aa19.18■□□□□ 0.66
PACSIN3-208ENST00000531226 SAE1Q9UBE0 346 aaPredicted RBP19.18■□□□□ 0.66
PACSIN3-208ENST00000531226 EFR3BQ9Y2G0 817 aa19.18■□□□□ 0.66
PACSIN3-208ENST00000531226 SPTBN4Q9H254 2564 aa19.17■□□□□ 0.66
PACSIN3-208ENST00000531226 A0A1B0GVT2 93 aa19.17■□□□□ 0.66
PACSIN3-208ENST00000531226 A0A1W2PQ67 120 aa19.17■□□□□ 0.66
PACSIN3-208ENST00000531226 PRAMEF26H0Y7S4 382 aa19.17■□□□□ 0.66
PACSIN3-208ENST00000531226 SLC30A4O14863 429 aa19.17■□□□□ 0.66
PACSIN3-208ENST00000531226 WNT9AO14904 365 aa19.17■□□□□ 0.66
PACSIN3-208ENST00000531226 VILLO15195 856 aa19.17■□□□□ 0.66
PACSIN3-208ENST00000531226 SLC31A1O15431 190 aa19.17■□□□□ 0.66
PACSIN3-208ENST00000531226 DDX3YO15523 660 aaKnown RBP19.17■□□□□ 0.66
PACSIN3-208ENST00000531226 HTRA2O43464 458 aaPredicted RBP19.17■□□□□ 0.66
PACSIN3-208ENST00000531226 PRLRP16471 622 aa19.17■□□□□ 0.66
PACSIN3-208ENST00000531226 CD38P28907 300 aa19.17■□□□□ 0.66
PACSIN3-208ENST00000531226 CETN2P41208 172 aa19.17■□□□□ 0.66
PACSIN3-208ENST00000531226 BNC1Q01954 994 aa19.17■□□□□ 0.66
PACSIN3-208ENST00000531226 ITKQ08881 620 aa19.17■□□□□ 0.66
PACSIN3-208ENST00000531226 TRAF2Q12933 501 aa19.17■□□□□ 0.66
PACSIN3-208ENST00000531226 ZBTB17Q13105 803 aa19.17■□□□□ 0.66
PACSIN3-208ENST00000531226 PRKD1Q15139 912 aaPredicted RBP19.17■□□□□ 0.66
PACSIN3-208ENST00000531226 ADAT2Q7Z6V5 191 aaKnown RBP19.17■□□□□ 0.66
PACSIN3-208ENST00000531226 PAF1Q8N7H5 531 aa19.17■□□□□ 0.66
PACSIN3-208ENST00000531226 SPOCK2Q92563 424 aa19.17■□□□□ 0.66
PACSIN3-208ENST00000531226 RMDN1Q96DB5 314 aa19.17■□□□□ 0.66
PACSIN3-208ENST00000531226 HES6Q96HZ4 224 aa19.17■□□□□ 0.66
PACSIN3-208ENST00000531226 HERPUD2Q9BSE4 406 aa19.17■□□□□ 0.66
PACSIN3-208ENST00000531226 HEMGNQ9BXL5 484 aa19.17■□□□□ 0.66
PACSIN3-208ENST00000531226 PCDH12Q9NPG4 1184 aa19.17■□□□□ 0.66
PACSIN3-208ENST00000531226 LZTFL1Q9NQ48 299 aa19.17■□□□□ 0.66
PACSIN3-208ENST00000531226 ATP8A1Q9Y2Q0 1164 aa19.17■□□□□ 0.66
PACSIN3-208ENST00000531226 TTLL3Q9Y4R7 772 aa19.17■□□□□ 0.66
PACSIN3-208ENST00000531226 PCDHGC4Q9Y5F7 938 aa19.17■□□□□ 0.66
PACSIN3-208ENST00000531226 A0A1W2PR77 199 aa19.16■□□□□ 0.66
PACSIN3-208ENST00000531226 C4orf47A7E2U8 309 aa19.16■□□□□ 0.66
PACSIN3-208ENST00000531226 APOC4-APOC2K7ER74 178 aa19.16■□□□□ 0.66
PACSIN3-208ENST00000531226 RIOK3O14730 519 aaKnown RBP19.16■□□□□ 0.66
PACSIN3-208ENST00000531226 JCHAINP01591 159 aa19.16■□□□□ 0.66
PACSIN3-208ENST00000531226 APOC2P02655 101 aa19.16■□□□□ 0.66
PACSIN3-208ENST00000531226 WNT1P04628 370 aa19.16■□□□□ 0.66
PACSIN3-208ENST00000531226 PYGMP11217 842 aa19.16■□□□□ 0.66
PACSIN3-208ENST00000531226 ITIH2P19823 946 aa19.16■□□□□ 0.66
PACSIN3-208ENST00000531226 HNRNPA2B1P22626 353 aaKnown RBP19.16■□□□□ 0.66
PACSIN3-208ENST00000531226 CES1P23141 567 aa19.16■□□□□ 0.66
PACSIN3-208ENST00000531226 POLR2LP62875 67 aaKnown RBP19.16■□□□□ 0.66
PACSIN3-208ENST00000531226 DSC2Q02487 901 aa19.16■□□□□ 0.66
PACSIN3-208ENST00000531226 FGL2Q14314 439 aa19.16■□□□□ 0.66
PACSIN3-208ENST00000531226 TMEM52BQ4KMG9 183 aa19.16■□□□□ 0.66
PACSIN3-208ENST00000531226 SLC45A4Q5BKX6 768 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms