RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 LRRC14Q15048 493 aa10.55□□□□□ -0.72
COPB1-207ENST00000529866 IRF4Q15306 451 aa10.55□□□□□ -0.72
COPB1-207ENST00000529866 ENPP7Q6UWV6 458 aa10.55□□□□□ -0.72
COPB1-207ENST00000529866 FAM183BPQ6ZVS7 135 aa10.55□□□□□ -0.72
COPB1-207ENST00000529866 ENOSF1Q7L5Y1 443 aa10.55□□□□□ -0.72
COPB1-207ENST00000529866 RD3Q7Z3Z2 195 aa10.55□□□□□ -0.72
COPB1-207ENST00000529866 TTC7BQ86TV6 843 aa10.55□□□□□ -0.72
COPB1-207ENST00000529866 SLITRK4Q8IW52 837 aa10.55□□□□□ -0.72
COPB1-207ENST00000529866 ZNF683Q8IZ20 524 aa10.55□□□□□ -0.72
COPB1-207ENST00000529866 TP53I13Q8NBR0 393 aaPredicted RBP10.55□□□□□ -0.72
COPB1-207ENST00000529866 CCDC112Q8NEF3 446 aa10.55□□□□□ -0.72
COPB1-207ENST00000529866 GPR156Q8NFN8 814 aa10.55□□□□□ -0.72
COPB1-207ENST00000529866 OR2AP1Q8NGE2 309 aa10.55□□□□□ -0.72
COPB1-207ENST00000529866 JPH3Q8WXH2 748 aaPredicted RBP10.55□□□□□ -0.72
COPB1-207ENST00000529866 TSACCQ96A04 125 aaPredicted RBP10.55□□□□□ -0.72
COPB1-207ENST00000529866 DHTKD1Q96HY7 919 aaPredicted RBP10.55□□□□□ -0.72
COPB1-207ENST00000529866 FAM81BQ96LP2 452 aa10.55□□□□□ -0.72
COPB1-207ENST00000529866 C1orf74Q96LT6 269 aa10.55□□□□□ -0.72
COPB1-207ENST00000529866 MBNL1Q9NR56 388 aaKnown RBP10.55□□□□□ -0.72
COPB1-207ENST00000529866 TEP1Q99973 2627 aaKnown RBP10.54□□□□□ -0.72
COPB1-207ENST00000529866 CAPN5O15484 640 aaPredicted RBP10.54□□□□□ -0.72
COPB1-207ENST00000529866 NUDT21O43809 227 aaKnown RBP10.54□□□□□ -0.72
COPB1-207ENST00000529866 SRGAP2O75044 1071 aa10.54□□□□□ -0.72
COPB1-207ENST00000529866 POP4O95707 220 aaKnown RBP10.54□□□□□ -0.72
COPB1-207ENST00000529866 CPNE6O95741 557 aa10.54□□□□□ -0.72
COPB1-207ENST00000529866 TNFP01375 233 aa10.54□□□□□ -0.72
COPB1-207ENST00000529866 XPAP23025 273 aaPredicted RBP10.54□□□□□ -0.72
COPB1-207ENST00000529866 GKP32189 559 aa10.54□□□□□ -0.72
COPB1-207ENST00000529866 SULT1E1P49888 294 aa10.54□□□□□ -0.72
COPB1-207ENST00000529866 SLC6A3Q01959 620 aa10.54□□□□□ -0.72
COPB1-207ENST00000529866 APBA1Q02410 837 aa10.54□□□□□ -0.72
COPB1-207ENST00000529866 DEUP1Q05D60 604 aa10.54□□□□□ -0.72
COPB1-207ENST00000529866 RAD51Q06609 339 aa10.54□□□□□ -0.72
COPB1-207ENST00000529866 CLPPQ16740 277 aaPredicted RBP10.54□□□□□ -0.72
COPB1-207ENST00000529866 KLHL40Q2TBA0 621 aa10.54□□□□□ -0.72
COPB1-207ENST00000529866 C14orf28Q4W4Y0 310 aa10.54□□□□□ -0.72
COPB1-207ENST00000529866 PIM3Q86V86 326 aa10.54□□□□□ -0.72
COPB1-207ENST00000529866 ZDHHC17Q8IUH5 632 aa10.54□□□□□ -0.72
COPB1-207ENST00000529866 TRIM59Q8IWR1 403 aa10.54□□□□□ -0.72
COPB1-207ENST00000529866 ELOA2Q8IYF1 753 aaPredicted RBP10.54□□□□□ -0.72
COPB1-207ENST00000529866 EHBP1Q8NDI1 1231 aa10.54□□□□□ -0.72
COPB1-207ENST00000529866 ZNF397Q8NF99 534 aaPredicted RBP10.54□□□□□ -0.72
COPB1-207ENST00000529866 KIAA1524Q8TCG1 905 aa10.54□□□□□ -0.72
COPB1-207ENST00000529866 ARHGEF2Q92974 986 aaKnown RBP10.54□□□□□ -0.72
COPB1-207ENST00000529866 PGAP3Q96FM1 320 aaPredicted RBP10.54□□□□□ -0.72
COPB1-207ENST00000529866 KLHL32Q96NJ5 620 aa10.54□□□□□ -0.72
COPB1-207ENST00000529866 TAAR9Q96RI9 348 aa10.54□□□□□ -0.72
COPB1-207ENST00000529866 RBM15Q96T37 977 aaKnown RBP eCLIP10.54□□□□□ -0.72
COPB1-207ENST00000529866 ZYG11BQ9C0D3 744 aa10.54□□□□□ -0.72
COPB1-207ENST00000529866 INTS2Q9H0H0 1204 aaKnown RBP10.54□□□□□ -0.72
COPB1-207ENST00000529866 CDH19Q9H159 772 aa10.54□□□□□ -0.72
COPB1-207ENST00000529866 UBE2TQ9NPD8 197 aaPredicted RBP10.54□□□□□ -0.72
COPB1-207ENST00000529866 ACP6Q9NPH0 428 aa10.54□□□□□ -0.72
COPB1-207ENST00000529866 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.54□□□□□ -0.721e-13■■□□□ 14.1
COPB1-207ENST00000529866 LRIT1Q9P2V4 623 aa10.54□□□□□ -0.72
COPB1-207ENST00000529866 AJAP1Q9UKB5 411 aaPredicted RBP10.54□□□□□ -0.72
COPB1-207ENST00000529866 HPCAL4Q9UM19 191 aa10.54□□□□□ -0.72
COPB1-207ENST00000529866 PCDHGA3Q9Y5H0 932 aa10.54□□□□□ -0.72
COPB1-207ENST00000529866 SNX10Q9Y5X0 201 aa10.54□□□□□ -0.72
COPB1-207ENST00000529866 B4DGG1 531 aa10.53□□□□□ -0.72
COPB1-207ENST00000529866 USP8P40818 1118 aa10.53□□□□□ -0.72
COPB1-207ENST00000529866 SUOXP51687 545 aa10.53□□□□□ -0.72
COPB1-207ENST00000529866 ELP6Q0PNE2 266 aa10.53□□□□□ -0.72
COPB1-207ENST00000529866 SEPT6Q14141 434 aa10.53□□□□□ -0.72
COPB1-207ENST00000529866 C16orf72Q14CZ0 275 aa10.53□□□□□ -0.72
COPB1-207ENST00000529866 MYLK3Q32MK0 819 aa10.53□□□□□ -0.72
COPB1-207ENST00000529866 LRRC73Q5JTD7 316 aa10.53□□□□□ -0.72
COPB1-207ENST00000529866 OTUD1Q5VV17 481 aaPredicted RBP10.53□□□□□ -0.72
COPB1-207ENST00000529866 GJB7Q6PEY0 223 aa10.53□□□□□ -0.72
COPB1-207ENST00000529866 GDPD4Q6W3E5 623 aa10.53□□□□□ -0.72
COPB1-207ENST00000529866 TAF8Q7Z7C8 310 aa10.53□□□□□ -0.72
COPB1-207ENST00000529866 PASD1Q8IV76 773 aa10.53□□□□□ -0.72
COPB1-207ENST00000529866 DRC7Q8IY82 874 aa10.53□□□□□ -0.72
COPB1-207ENST00000529866 C1orf131Q8NDD1 294 aaKnown RBP10.53□□□□□ -0.72
COPB1-207ENST00000529866 FAM46DQ8NEK8 389 aa10.53□□□□□ -0.72
COPB1-207ENST00000529866 NKD1Q969G9 470 aa10.53□□□□□ -0.72
COPB1-207ENST00000529866 KIAA1143Q96AT1 154 aaPredicted RBP10.53□□□□□ -0.72
COPB1-207ENST00000529866 PDXPQ96GD0 296 aa10.53□□□□□ -0.72
COPB1-207ENST00000529866 WDR92Q96MX6 357 aa10.53□□□□□ -0.72
COPB1-207ENST00000529866 GDAP1L1Q96MZ0 367 aa10.53□□□□□ -0.72
COPB1-207ENST00000529866 HAPLN3Q96S86 360 aa10.53□□□□□ -0.72
COPB1-207ENST00000529866 NPY6RQ99463 290 aa10.53□□□□□ -0.72
COPB1-207ENST00000529866 WRAP53Q9BUR4 548 aaKnown RBP10.53□□□□□ -0.72
COPB1-207ENST00000529866 SEMA6CQ9H3T2 930 aa10.53□□□□□ -0.72
COPB1-207ENST00000529866 ZNF71Q9NQZ8 489 aaPredicted RBP10.53□□□□□ -0.72
COPB1-207ENST00000529866 DGKBQ9Y6T7 804 aa10.53□□□□□ -0.72
COPB1-207ENST00000529866 BECN2A8MW95 431 aa10.52□□□□□ -0.73
COPB1-207ENST00000529866 I6L893 689 aaPredicted RBP10.52□□□□□ -0.73
COPB1-207ENST00000529866 CACNB4O00305 520 aaPredicted RBP10.52□□□□□ -0.73
COPB1-207ENST00000529866 GNA14O95837 355 aa10.52□□□□□ -0.73
COPB1-207ENST00000529866 ERBB2P04626 1255 aa10.52□□□□□ -0.73
COPB1-207ENST00000529866 LIFP15018 202 aa10.52□□□□□ -0.73
COPB1-207ENST00000529866 KELP23276 732 aa10.52□□□□□ -0.73
COPB1-207ENST00000529866 PPP1R2P41236 205 aa10.52□□□□□ -0.73
COPB1-207ENST00000529866 MARSP56192 900 aaKnown RBP10.52□□□□□ -0.73
COPB1-207ENST00000529866 RNASE9P60153 205 aaKnown RBP10.52□□□□□ -0.73
COPB1-207ENST00000529866 PAK1Q13153 545 aa10.52□□□□□ -0.73
COPB1-207ENST00000529866 BIRC2Q13490 618 aa10.52□□□□□ -0.73
COPB1-207ENST00000529866 MTM1Q13496 603 aa10.52□□□□□ -0.73
COPB1-207ENST00000529866 HLTFQ14527 1009 aaKnown RBP eCLIP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms