RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 AASDHPPTQ9NRN7 309 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 AMACRQ9UHK6 382 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 ANKRD36A6QL64 1941 aa12.8□□□□□ -0.36
CCDC90B-216ENST00000529856 hCG_1818297A0A087WSY0 165 aa12.79□□□□□ -0.36
CCDC90B-216ENST00000529856 CCDC66A2RUB6 948 aa12.79□□□□□ -0.36
CCDC90B-216ENST00000529856 PRAMEF26H0Y7S4 382 aa12.79□□□□□ -0.36
CCDC90B-216ENST00000529856 NEMP1O14524 444 aa12.79□□□□□ -0.36
CCDC90B-216ENST00000529856 TRAFD1O14545 582 aaPredicted RBP12.79□□□□□ -0.36
CCDC90B-216ENST00000529856 SLC31A1O15431 190 aa12.79□□□□□ -0.36
CCDC90B-216ENST00000529856 CST8O60676 142 aa12.79□□□□□ -0.36
CCDC90B-216ENST00000529856 WNT1P04628 370 aa12.79□□□□□ -0.36
CCDC90B-216ENST00000529856 CD38P28907 300 aa12.79□□□□□ -0.36
CCDC90B-216ENST00000529856 NR2C2P49116 596 aa12.79□□□□□ -0.36
CCDC90B-216ENST00000529856 COPS2P61201 443 aa12.79□□□□□ -0.36
CCDC90B-216ENST00000529856 MAXP61244 160 aa12.79□□□□□ -0.36
CCDC90B-216ENST00000529856 DYNLT1P63172 113 aa12.79□□□□□ -0.36
CCDC90B-216ENST00000529856 ADCY2Q08462 1091 aa12.79□□□□□ -0.36
CCDC90B-216ENST00000529856 FGL2Q14314 439 aa12.79□□□□□ -0.36
CCDC90B-216ENST00000529856 LLGL1Q15334 1064 aa12.79□□□□□ -0.36
CCDC90B-216ENST00000529856 PPP2R5EQ16537 467 aa12.79□□□□□ -0.36
CCDC90B-216ENST00000529856 KIF19Q2TAC6 998 aa12.79□□□□□ -0.36
CCDC90B-216ENST00000529856 TMEM52BQ4KMG9 183 aa12.79□□□□□ -0.36
CCDC90B-216ENST00000529856 CFAP58Q5T655 872 aa12.79□□□□□ -0.36
CCDC90B-216ENST00000529856 KAZNQ674X7 775 aa12.79□□□□□ -0.36
CCDC90B-216ENST00000529856 IL27RAQ6UWB1 636 aa12.79□□□□□ -0.36
CCDC90B-216ENST00000529856 ADAT2Q7Z6V5 191 aaKnown RBP12.79□□□□□ -0.36
CCDC90B-216ENST00000529856 ZSWIM9Q86XI8 627 aa12.79□□□□□ -0.36
CCDC90B-216ENST00000529856 SYCE1Q8N0S2 351 aa12.79□□□□□ -0.36
CCDC90B-216ENST00000529856 MINDY1Q8N5J2 469 aa12.79□□□□□ -0.36
CCDC90B-216ENST00000529856 MFSD2AQ8NA29 543 aa12.79□□□□□ -0.36
CCDC90B-216ENST00000529856 OR2I1PQ8NGU4 316 aa12.79□□□□□ -0.36
CCDC90B-216ENST00000529856 SKA1Q96BD8 255 aa12.79□□□□□ -0.36
CCDC90B-216ENST00000529856 OLFM3Q96PB7 478 aa12.79□□□□□ -0.36
CCDC90B-216ENST00000529856 C1QTNF2Q9BXJ5 285 aa12.79□□□□□ -0.36
CCDC90B-216ENST00000529856 BRD8Q9H0E9 1235 aa12.79□□□□□ -0.36
CCDC90B-216ENST00000529856 RBM22Q9NW64 420 aaKnown RBP eCLIP12.79□□□□□ -0.36
CCDC90B-216ENST00000529856 GGT7Q9UJ14 662 aa12.79□□□□□ -0.36
CCDC90B-216ENST00000529856 AMFRQ9UKV5 643 aa12.79□□□□□ -0.36
CCDC90B-216ENST00000529856 ITM2BQ9Y287 266 aa12.79□□□□□ -0.36
CCDC90B-216ENST00000529856 ANKRD6Q9Y2G4 727 aa12.79□□□□□ -0.36
CCDC90B-216ENST00000529856 IGLON5A6NGN9 336 aa12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 UPK3BL1B0FP48 263 aa12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 UPK3BL2E5RIL1 263 aa12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 HTRA2O43464 458 aaPredicted RBP12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 OPHN1O60890 802 aa12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 PAK4O96013 591 aaPredicted RBP12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 PRLRP16471 622 aa12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 TGM2P21980 687 aa12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 HNRNPA2B1P22626 353 aaKnown RBP12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 XPAP23025 273 aaPredicted RBP12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 CES1P23141 567 aa12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 RWDD2BP57060 319 aa12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 POLR2LP62875 67 aaKnown RBP12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 IFI35P80217 286 aaPredicted RBP12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 CCZ1BP86790 482 aa12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 CCZ1P86791 482 aaPredicted RBP12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 ITKQ08881 620 aa12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 ELP6Q0PNE2 266 aa12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 STAT4Q14765 748 aa12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 HLA-BQ31612 363 aa12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 UAP1L1Q3KQV9 507 aa12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 SLC45A4Q5BKX6 768 aa12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 LRRC73Q5JTD7 316 aa12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 ALG1LQ6GMV1 187 aa12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 LAYNQ6UX15 382 aa12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 BBS12Q6ZW61 710 aa12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 BZW1Q7L1Q6 419 aaKnown RBP12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 PEX26Q7Z412 305 aa12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 IQCHQ86VS3 1027 aa12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 CCDC50Q8IVM0 306 aa12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 TMEM145Q8NBT3 493 aa12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 ASB12Q8WXK4 309 aa12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 SPOCK2Q92563 424 aa12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 IL12RB2Q99665 862 aa12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 SEMA3CQ99985 751 aa12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 TSGA10Q9BZW7 698 aa12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 POLR1EQ9GZS1 481 aaKnown RBP12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 GAREM1Q9H706 876 aa12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 PCDH12Q9NPG4 1184 aa12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 DNAAF2Q9NVR5 837 aaKnown RBP12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 SAE1Q9UBE0 346 aaPredicted RBP12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 EFR3BQ9Y2G0 817 aa12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 ATP8A1Q9Y2Q0 1164 aa12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 PCDHGC4Q9Y5F7 938 aa12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 SNX11Q9Y5W9 270 aa12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 SPTBN4Q9H254 2564 aa12.78□□□□□ -0.36
CCDC90B-216ENST00000529856 KNL1Q8NG31 2342 aa12.77□□□□□ -0.36
CCDC90B-216ENST00000529856 A0A1W2PQ67 120 aa12.77□□□□□ -0.37
CCDC90B-216ENST00000529856 MIF4GDA9UHW6 222 aaKnown RBP12.77□□□□□ -0.37
CCDC90B-216ENST00000529856 KCNK1O00180 336 aa12.77□□□□□ -0.37
CCDC90B-216ENST00000529856 TLR4O00206 839 aa12.77□□□□□ -0.37
CCDC90B-216ENST00000529856 RIOK3O14730 519 aaKnown RBP12.77□□□□□ -0.37
CCDC90B-216ENST00000529856 PPP1R12AO14974 1030 aaPredicted RBP12.77□□□□□ -0.37
CCDC90B-216ENST00000529856 KRT86O43790 486 aa12.77□□□□□ -0.37
CCDC90B-216ENST00000529856 MMP20O60882 483 aa12.77□□□□□ -0.37
CCDC90B-216ENST00000529856 SOCS5O75159 536 aa12.77□□□□□ -0.37
CCDC90B-216ENST00000529856 JCHAINP01591 159 aa12.77□□□□□ -0.37
CCDC90B-216ENST00000529856 PECAM1P16284 738 aaPredicted RBP12.77□□□□□ -0.37
CCDC90B-216ENST00000529856 AKT2P31751 481 aa12.77□□□□□ -0.37
CCDC90B-216ENST00000529856 CTSKP43235 329 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms