RNA–Protein interactions for RNA: ENST00000529073.5

CCDC90B-211, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5 BASIC

Gene CCDC90B, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-211ENST00000529073 OLFM3Q96PB7 478 aa11.52□□□□□ -0.57
CCDC90B-211ENST00000529073 KLF6Q99612 283 aaPredicted RBP11.52□□□□□ -0.57
CCDC90B-211ENST00000529073 MGME1Q9BQP7 344 aa11.52□□□□□ -0.57
CCDC90B-211ENST00000529073 KRTAP3-3Q9BYR6 98 aa11.52□□□□□ -0.57
CCDC90B-211ENST00000529073 KRTAP3-2Q9BYR7 98 aa11.52□□□□□ -0.57
CCDC90B-211ENST00000529073 RETREG1Q9H6L5 497 aa11.52□□□□□ -0.57
CCDC90B-211ENST00000529073 DYRK4Q9NR20 520 aa11.52□□□□□ -0.57
CCDC90B-211ENST00000529073 RCOR3Q9P2K3 495 aaPredicted RBP11.52□□□□□ -0.57
CCDC90B-211ENST00000529073 ANKRD6Q9Y2G4 727 aa11.52□□□□□ -0.57
CCDC90B-211ENST00000529073 TSPAN11A1L157 253 aa11.51□□□□□ -0.57
CCDC90B-211ENST00000529073 UPK3BL1B0FP48 263 aa11.51□□□□□ -0.57
CCDC90B-211ENST00000529073 UPK3BL2E5RIL1 263 aa11.51□□□□□ -0.57
CCDC90B-211ENST00000529073 APOL1O14791 398 aa11.51□□□□□ -0.57
CCDC90B-211ENST00000529073 PSTPIP1O43586 416 aa11.51□□□□□ -0.57
CCDC90B-211ENST00000529073 CST8O60676 142 aa11.51□□□□□ -0.57
CCDC90B-211ENST00000529073 SDC3O75056 442 aa11.51□□□□□ -0.57
CCDC90B-211ENST00000529073 PAK4O96013 591 aaPredicted RBP11.51□□□□□ -0.57
CCDC90B-211ENST00000529073 JCHAINP01591 159 aa11.51□□□□□ -0.57
CCDC90B-211ENST00000529073 PYGMP11217 842 aa11.51□□□□□ -0.57
CCDC90B-211ENST00000529073 SLC1A1P43005 524 aa11.51□□□□□ -0.57
CCDC90B-211ENST00000529073 MMP13P45452 471 aa11.51□□□□□ -0.57
CCDC90B-211ENST00000529073 PEX5P50542 639 aa11.51□□□□□ -0.57
CCDC90B-211ENST00000529073 NAP1L1P55209 391 aaKnown RBP11.51□□□□□ -0.57
CCDC90B-211ENST00000529073 GEMIN4P57678 1058 aaKnown RBP11.51□□□□□ -0.57
CCDC90B-211ENST00000529073 HLA-BQ31612 363 aa11.51□□□□□ -0.57
CCDC90B-211ENST00000529073 ZNF542PQ5EBM4 170 aa11.51□□□□□ -0.57
CCDC90B-211ENST00000529073 CCDC50Q8IVM0 306 aa11.51□□□□□ -0.57
CCDC90B-211ENST00000529073 LRRC8AQ8IWT6 810 aa11.51□□□□□ -0.57
CCDC90B-211ENST00000529073 PLPP6Q8IY26 295 aa11.51□□□□□ -0.57
CCDC90B-211ENST00000529073 KATNAL2Q8IYT4 538 aa11.51□□□□□ -0.57
CCDC90B-211ENST00000529073 LZTR1Q8N653 840 aa11.51□□□□□ -0.57
CCDC90B-211ENST00000529073 CCNYQ8ND76 341 aa11.51□□□□□ -0.57
CCDC90B-211ENST00000529073 ARRDC2Q8TBH0 407 aa11.51□□□□□ -0.57
CCDC90B-211ENST00000529073 NETO1Q8TDF5 533 aa11.51□□□□□ -0.57
CCDC90B-211ENST00000529073 PDCD6IPQ8WUM4 868 aaKnown RBP11.51□□□□□ -0.57
CCDC90B-211ENST00000529073 BMFQ96LC9 184 aa11.51□□□□□ -0.57
CCDC90B-211ENST00000529073 PSKH2Q96QS6 385 aa11.51□□□□□ -0.57
CCDC90B-211ENST00000529073 SEMA3CQ99985 751 aa11.51□□□□□ -0.57
CCDC90B-211ENST00000529073 NUSAP1Q9BXS6 441 aaKnown RBP11.51□□□□□ -0.57
CCDC90B-211ENST00000529073 SUV39H2Q9H5I1 410 aa11.51□□□□□ -0.57
CCDC90B-211ENST00000529073 GAREM1Q9H706 876 aa11.51□□□□□ -0.57
CCDC90B-211ENST00000529073 PREBQ9HCU5 417 aa11.51□□□□□ -0.57
CCDC90B-211ENST00000529073 TMEM9BQ9NQ34 198 aa11.51□□□□□ -0.57
CCDC90B-211ENST00000529073 SEPT10Q9P0V9 454 aa11.51□□□□□ -0.57
CCDC90B-211ENST00000529073 SEPT3Q9UH03 358 aa11.51□□□□□ -0.57
CCDC90B-211ENST00000529073 SPAARA0A1B0GVQ0 90 aa11.5□□□□□ -0.57
CCDC90B-211ENST00000529073 BTNL10A8MVZ5 291 aa11.5□□□□□ -0.57
CCDC90B-211ENST00000529073 SLC7A4O43246 635 aa11.5□□□□□ -0.57
CCDC90B-211ENST00000529073 SH3BP5O60239 455 aa11.5□□□□□ -0.57
CCDC90B-211ENST00000529073 MYF5P13349 255 aa11.5□□□□□ -0.57
CCDC90B-211ENST00000529073 LHCGRP22888 699 aa11.5□□□□□ -0.57
CCDC90B-211ENST00000529073 CTNNA1P35221 906 aaKnown RBP11.5□□□□□ -0.57
CCDC90B-211ENST00000529073 SERPINB6P35237 376 aa11.5□□□□□ -0.57
CCDC90B-211ENST00000529073 MMP12P39900 470 aa11.5□□□□□ -0.57
CCDC90B-211ENST00000529073 ZNF135P52742 658 aaPredicted RBP11.5□□□□□ -0.57
CCDC90B-211ENST00000529073 CLDN6P56747 220 aa11.5□□□□□ -0.57
CCDC90B-211ENST00000529073 OLIG2Q13516 323 aa11.5□□□□□ -0.57
CCDC90B-211ENST00000529073 LRRC38Q5VT99 294 aa11.5□□□□□ -0.57
CCDC90B-211ENST00000529073 NAPEPLDQ6IQ20 393 aa11.5□□□□□ -0.57
CCDC90B-211ENST00000529073 PSAPL1Q6NUJ1 521 aa11.5□□□□□ -0.57
CCDC90B-211ENST00000529073 TTC7BQ86TV6 843 aa11.5□□□□□ -0.57
CCDC90B-211ENST00000529073 ZC3H18Q86VM9 953 aaKnown RBP11.5□□□□□ -0.57
CCDC90B-211ENST00000529073 TEX26Q8N6G2 289 aa11.5□□□□□ -0.57
CCDC90B-211ENST00000529073 TMEM145Q8NBT3 493 aa11.5□□□□□ -0.57
CCDC90B-211ENST00000529073 PLA2G15Q8NCC3 412 aa11.5□□□□□ -0.57
CCDC90B-211ENST00000529073 SPATA22Q8NHS9 363 aa11.5□□□□□ -0.57
CCDC90B-211ENST00000529073 CASKIN2Q8WXE0 1202 aa11.5□□□□□ -0.57
CCDC90B-211ENST00000529073 ECHDC3Q96DC8 303 aa11.5□□□□□ -0.57
CCDC90B-211ENST00000529073 NUDCD1Q96RS6 583 aa11.5□□□□□ -0.57
CCDC90B-211ENST00000529073 GORASP1Q9BQQ3 440 aa11.5□□□□□ -0.57
CCDC90B-211ENST00000529073 PCED1AQ9H1Q7 454 aa11.5□□□□□ -0.57
CCDC90B-211ENST00000529073 TCEAL2Q9H3H9 227 aaPredicted RBP11.5□□□□□ -0.57
CCDC90B-211ENST00000529073 RBM22Q9NW64 420 aaKnown RBP eCLIP11.5□□□□□ -0.57
CCDC90B-211ENST00000529073 B4GALT6Q9UBX8 382 aa11.5□□□□□ -0.57
CCDC90B-211ENST00000529073 GUCA1BQ9UMX6 200 aa11.5□□□□□ -0.57
CCDC90B-211ENST00000529073 R3HDM2Q9Y2K5 976 aaKnown RBP11.5□□□□□ -0.57
CCDC90B-211ENST00000529073 GOLGA6L3A6NEY3 463 aa11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 NPIPB15A6NHN6 443 aaPredicted RBP11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 K7ESM1 405 aa11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 MATN3O15232 486 aa11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 CASC3O15234 703 aaKnown RBP11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 PIRTP0C851 137 aa11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 C6P13671 934 aa11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 SPINK2P20155 84 aa11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 CTNNA2P26232 953 aa11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 CD68P34810 354 aaPredicted RBP11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 GRIA4P48058 902 aa11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 AFF3P51826 1226 aaKnown RBP11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 NXPH1P58417 271 aa11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 SKOR1P84550 965 aa11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 BCL2L1Q07817 233 aa11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 PPIDQ08752 370 aaKnown RBP11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 ITKQ08881 620 aa11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 AP1B1Q10567 949 aa11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 WASHC5Q12768 1159 aa11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 BNIP3Q12983 259 aa11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 PRKD1Q15139 912 aaPredicted RBP11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 IRF4Q15306 451 aa11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 IFI16Q16666 785 aaKnown RBP11.49□□□□□ -0.57
CCDC90B-211ENST00000529073 MARC1Q5VT66 337 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms