RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	ADAMTS14	Q8WXS8	1223 aa		11.87	□□□□□ -0.51
PSMC3-205	ENST00000528362	RFFL	Q8WZ73	363 aa		11.87	□□□□□ -0.51
PSMC3-205	ENST00000528362	FAF2	Q96CS3	445 aa		11.87	□□□□□ -0.51
PSMC3-205	ENST00000528362	ECHDC3	Q96DC8	303 aa		11.87	□□□□□ -0.51
PSMC3-205	ENST00000528362	ZNF670	Q9BS34	389 aa		11.87	□□□□□ -0.51
PSMC3-205	ENST00000528362	WRAP53	Q9BUR4	548 aa	Known RBP	11.87	□□□□□ -0.51
PSMC3-205	ENST00000528362	ATP13A3	Q9H7F0	1226 aa		11.87	□□□□□ -0.51
PSMC3-205	ENST00000528362	KLK13	Q9UKR3	277 aa		11.87	□□□□□ -0.51
PSMC3-205	ENST00000528362	APOBEC2	Q9Y235	224 aa	Known RBP	11.87	□□□□□ -0.51
PSMC3-205	ENST00000528362	HS3ST3A1	Q9Y663	406 aa		11.87	□□□□□ -0.51
PSMC3-205	ENST00000528362	FREM2	Q5SZK8	3169 aa		11.87	□□□□□ -0.51
PSMC3-205	ENST00000528362	USP24	Q9UPU5	2620 aa		11.87	□□□□□ -0.51
PSMC3-205	ENST00000528362	TTC24	A2A3L6	582 aa	Predicted RBP	11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	TRAFD1	O14545	582 aa	Predicted RBP	11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	FPGT	O14772	594 aa		11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	TNFSF14	O43557	240 aa		11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	PRKCG	P05129	697 aa		11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	KRT7	P08729	469 aa		11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	CR2	P20023	1033 aa		11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	XPA	P23025	273 aa	Predicted RBP	11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	SERPINA4	P29622	427 aa		11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	IGFALS	P35858	605 aa		11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	MMP12	P39900	470 aa		11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	SCNN1B	P51168	640 aa		11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	SUOX	P51687	545 aa		11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	PFN3	P60673	137 aa		11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	BCL2L1	Q07817	233 aa		11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	ELP6	Q0PNE2	266 aa		11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	GALNT2	Q10471	571 aa		11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	FZD2	Q14332	565 aa		11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	ZNF235	Q14590	738 aa		11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	PAFAH1B3	Q15102	231 aa	Known RBP	11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	PDK2	Q15119	407 aa		11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	ANKRD20A8P	Q5CZ79	823 aa		11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	TPRG1L	Q5T0D9	272 aa		11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	CFAP58	Q5T655	872 aa		11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	GAS2L3	Q86XJ1	694 aa		11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	RHOT2	Q8IXI1	618 aa		11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	PQLC3	Q8N755	202 aa		11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	FAM174A	Q8TBP5	190 aa		11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	CXorf40A	Q8TE69	158 aa		11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	RAPGEF5	Q92565	580 aa		11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	CENPT	Q96BT3	561 aa		11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	MGME1	Q9BQP7	344 aa		11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	FTSJ1	Q9UET6	329 aa		11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	ATP8A1	Q9Y2Q0	1164 aa		11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	NEUROG3	Q9Y4Z2	214 aa		11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	PLXNA2	O75051	1894 aa		11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	ASPM	Q8IZT6	3477 aa		11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	CABIN1	Q9Y6J0	2220 aa		11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	PCNX2	A6NKB5	2137 aa		11.86	□□□□□ -0.51
PSMC3-205	ENST00000528362	SPTY2D1-AS1	A0A0U1RR47	76 aa		11.85	□□□□□ -0.51
PSMC3-205	ENST00000528362	GOLGA8CP	A6NN73	597 aa		11.85	□□□□□ -0.51
PSMC3-205	ENST00000528362	RIOK3	O14730	519 aa	Known RBP	11.85	□□□□□ -0.51
PSMC3-205	ENST00000528362	HTRA2	O43464	458 aa	Predicted RBP	11.85	□□□□□ -0.51
PSMC3-205	ENST00000528362	TM7SF2	O76062	418 aa		11.85	□□□□□ -0.51
PSMC3-205	ENST00000528362	MAP3K6	O95382	1288 aa		11.85	□□□□□ -0.51
PSMC3-205	ENST00000528362	C6	P13671	934 aa		11.85	□□□□□ -0.51
PSMC3-205	ENST00000528362	DGKA	P23743	735 aa		11.85	□□□□□ -0.51
PSMC3-205	ENST00000528362	HSPA9	P38646	679 aa	Known RBP	11.85	□□□□□ -0.51
PSMC3-205	ENST00000528362	GARS	P41250	739 aa	Known RBP	11.85	□□□□□ -0.51
PSMC3-205	ENST00000528362	ARHGAP25	P42331	645 aa		11.85	□□□□□ -0.51
PSMC3-205	ENST00000528362	RABIF	P47224	123 aa		11.85	□□□□□ -0.51
PSMC3-205	ENST00000528362	RENBP	P51606	427 aa		11.85	□□□□□ -0.51
PSMC3-205	ENST00000528362	ZNF75D	P51815	510 aa		11.85	□□□□□ -0.51
PSMC3-205	ENST00000528362	SEMG2	Q02383	582 aa		11.85	□□□□□ -0.51
PSMC3-205	ENST00000528362	TCEAL1	Q15170	157 aa		11.85	□□□□□ -0.51
PSMC3-205	ENST00000528362	ZNF542P	Q5EBM4	170 aa		11.85	□□□□□ -0.51
PSMC3-205	ENST00000528362	ERAP2	Q6P179	960 aa		11.85	□□□□□ -0.51
PSMC3-205	ENST00000528362	DCP2	Q8IU60	420 aa	Known RBP	11.85	□□□□□ -0.51
PSMC3-205	ENST00000528362	LRRC49	Q8IUZ0	686 aa		11.85	□□□□□ -0.51
PSMC3-205	ENST00000528362	MAP7D3	Q8IWC1	876 aa		11.85	□□□□□ -0.51
PSMC3-205	ENST00000528362	SLC25A45	Q8N413	288 aa		11.85	□□□□□ -0.51
PSMC3-205	ENST00000528362	EID2	Q8N6I1	236 aa		11.85	□□□□□ -0.51
PSMC3-205	ENST00000528362	TP53I13	Q8NBR0	393 aa	Predicted RBP	11.85	□□□□□ -0.51
PSMC3-205	ENST00000528362	SPOCK2	Q92563	424 aa		11.85	□□□□□ -0.51
PSMC3-205	ENST00000528362	GATA6	Q92908	595 aa		11.85	□□□□□ -0.51
PSMC3-205	ENST00000528362	NUDCD1	Q96RS6	583 aa		11.85	□□□□□ -0.51
PSMC3-205	ENST00000528362	NOD2	Q9HC29	1040 aa		11.85	□□□□□ -0.51
PSMC3-205	ENST00000528362	MBNL1	Q9NR56	388 aa	Known RBP	11.85	□□□□□ -0.51
PSMC3-205	ENST00000528362	UCKL1	Q9NWZ5	548 aa		11.85	□□□□□ -0.51
PSMC3-205	ENST00000528362	INTU	Q9ULD6	942 aa		11.85	□□□□□ -0.51
PSMC3-205	ENST00000528362	COQ6	Q9Y2Z9	468 aa		11.85	□□□□□ -0.51
PSMC3-205	ENST00000528362	MAP1B	P46821	2468 aa	Known RBP	11.85	□□□□□ -0.51
PSMC3-205	ENST00000528362	LRRD1	A4D1F6	860 aa		11.84	□□□□□ -0.51
PSMC3-205	ENST00000528362	FAM221B	A6H8Z2	402 aa		11.84	□□□□□ -0.51
PSMC3-205	ENST00000528362	C3orf70	A6NLC5	250 aa	Predicted RBP	11.84	□□□□□ -0.51
PSMC3-205	ENST00000528362	C1QTNF9B	B2RNN3	333 aa		11.84	□□□□□ -0.51
PSMC3-205	ENST00000528362	TRIM38	O00635	465 aa		11.84	□□□□□ -0.51
PSMC3-205	ENST00000528362	ENC1	O14682	589 aa		11.84	□□□□□ -0.51
PSMC3-205	ENST00000528362	PIAS2	O75928	621 aa		11.84	□□□□□ -0.51
PSMC3-205	ENST00000528362	LDOC1	O95751	146 aa	Predicted RBP	11.84	□□□□□ -0.51
PSMC3-205	ENST00000528362	C1QTNF9	P0C862	333 aa		11.84	□□□□□ -0.51
PSMC3-205	ENST00000528362	KDELR1	P24390	212 aa		11.84	□□□□□ -0.51
PSMC3-205	ENST00000528362	MMP13	P45452	471 aa		11.84	□□□□□ -0.51
PSMC3-205	ENST00000528362	LIG3	P49916	1009 aa		11.84	□□□□□ -0.51
PSMC3-205	ENST00000528362	MAX	P61244	160 aa		11.84	□□□□□ -0.51
PSMC3-205	ENST00000528362	GBE1	Q04446	702 aa		11.84	□□□□□ -0.51
PSMC3-205	ENST00000528362	RALGDS	Q12967	914 aa		11.84	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms