RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 MBTD1Q05BQ5 628 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 SUZ12Q15022 739 aaKnown RBP7.26□□□□□ -1.25
CTNND1-218ENST00000528232 NR6A1Q15406 480 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 PPP1R15BQ5SWA1 713 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 C16orf46Q6P387 395 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 KIAA0408Q6ZU52 694 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 LRRC8DQ7L1W4 858 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 DHDDSQ86SQ9 333 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 SNX32Q86XE0 403 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 C12orf29Q8N999 325 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 MRPL48Q96GC5 212 aaKnown RBP7.26□□□□□ -1.25
CTNND1-218ENST00000528232 DCUN1D5Q9BTE7 237 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 SLC7A5P2Q9GIP4 190 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 MAGEE1Q9HCI5 957 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 ZNF112Q9UJU3 913 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 RAB26Q9ULW5 256 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 ADAMTS3O15072 1205 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 CCNKO75909 580 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 ENDOD1O94919 500 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 SEC24AO95486 1093 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 OR56A5P0C7T3 313 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 IDO1P14902 403 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 ATP5C1P36542 298 aaKnown RBP7.26□□□□□ -1.25
CTNND1-218ENST00000528232 AP1S2P56377 157 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 CAMK2GQ13555 558 aaPredicted RBP7.26□□□□□ -1.25
CTNND1-218ENST00000528232 ASTE1Q2TB18 679 aaPredicted RBP7.26□□□□□ -1.25
CTNND1-218ENST00000528232 TBCELQ5QJ74 424 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 PRAMEF19Q5SWL8 479 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 CHMP1BQ7LBR1 199 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 DEFB128Q7Z7B8 93 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 SFRP1Q8N474 314 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 POC5Q8NA72 575 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 SLC4A11Q8NBS3 891 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 NKD2Q969F2 451 aaPredicted RBP7.26□□□□□ -1.25
CTNND1-218ENST00000528232 ACOX2Q99424 681 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 PRDM12Q9H4Q4 367 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 HMX1Q9NP08 348 aaPredicted RBP7.26□□□□□ -1.25
CTNND1-218ENST00000528232 TRNAU1APQ9NX07 287 aaKnown RBP7.26□□□□□ -1.25
CTNND1-218ENST00000528232 ST3GAL5Q9UNP4 418 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 STXBP5LQ9Y2K9 1186 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 CCDC88AQ3V6T2 1871 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 SF3B1O75533 1304 aaKnown RBP eCLIP7.26□□□□□ -1.255e-6■■■■■ 59.8
CTNND1-218ENST00000528232 TCRBV9S1A1TA0A576 114 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 TPST1O60507 370 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 IFNA14P01570 189 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 ITGA2BP08514 1039 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 MLNP12872 115 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 SLC2A4P14672 509 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 DARSP14868 501 aaKnown RBP7.26□□□□□ -1.25
CTNND1-218ENST00000528232 RAG1P15918 1043 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 WARSP23381 471 aaKnown RBP7.26□□□□□ -1.25
CTNND1-218ENST00000528232 CREMQ03060 361 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 DPYSQ14117 519 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 FRG1Q14331 258 aaKnown RBP7.26□□□□□ -1.25
CTNND1-218ENST00000528232 HSDL1Q3SXM5 330 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 NOMO2Q5JPE7 1267 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 EGFLAMQ63HQ2 1017 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 ERAP2Q6P179 960 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 MZT2AQ6P582 158 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 AFTPHQ6ULP2 937 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 CYP2U1Q7Z449 544 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 STK32CQ86UX6 486 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 CCDC28AQ8IWP9 274 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 DHRSXQ8N5I4 330 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 ZNF557Q8N988 423 aaPredicted RBP7.26□□□□□ -1.25
CTNND1-218ENST00000528232 PROX1Q92786 737 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 PWWP2AQ96N64 755 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 PANX3Q96QZ0 392 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 CPXM1Q96SM3 734 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 NTPCRQ9BSD7 190 aaKnown RBP7.26□□□□□ -1.25
CTNND1-218ENST00000528232 PRRG3Q9BZD7 231 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 DPY30Q9C005 99 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 CLK4Q9HAZ1 481 aaKnown RBP7.26□□□□□ -1.25
CTNND1-218ENST00000528232 ZFYVE1Q9HBF4 777 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 CCNB1IP1Q9NPC3 277 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 DNMT3LQ9UJW3 386 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 MAPRE3Q9UPY8 281 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 PCDHGA10Q9Y5H3 936 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 PKD1L3Q7Z443 1732 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 MYH2Q9UKX2 1941 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 C15orf38-AP3S2A0A0A6YYH1 394 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 BCLAF3A2AJT9 711 aaKnown RBP7.26□□□□□ -1.25
CTNND1-218ENST00000528232 CCDC154A6NI56 674 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 TSPAN1O60635 241 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 ATP5F1P24539 256 aaPredicted RBP7.26□□□□□ -1.25
CTNND1-218ENST00000528232 CD86P42081 329 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 CDKN2BP42772 138 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 PTGIRP43119 386 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 BCL2L1Q07817 233 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 SQLEQ14534 574 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 SAMD4BQ5PRF9 694 aaKnown RBP7.26□□□□□ -1.25
CTNND1-218ENST00000528232 ARMC12Q5T9G4 340 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 UNC5AQ6ZN44 842 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 ARPINQ7Z6K5 226 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 NKAPQ8N5F7 415 aaKnown RBP7.26□□□□□ -1.25
CTNND1-218ENST00000528232 ATXN3LQ9H3M9 355 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 ACTR8Q9H981 624 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 STOX2Q9P2F5 926 aaPredicted RBP7.26□□□□□ -1.25
CTNND1-218ENST00000528232 MLXQ9UH92 298 aa7.26□□□□□ -1.25
CTNND1-218ENST00000528232 MKLN1Q9UL63 735 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms