RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 JMJD7P0C870 316 aa10.68□□□□□ -0.7
CPSF1-203ENST00000527916 ATP1A3P13637 1013 aa10.68□□□□□ -0.7
CPSF1-203ENST00000527916 GPD1P21695 349 aa10.68□□□□□ -0.7
CPSF1-203ENST00000527916 UGT1A5P35504 534 aa10.68□□□□□ -0.7
CPSF1-203ENST00000527916 MAPKAPK2P49137 400 aa10.68□□□□□ -0.7
CPSF1-203ENST00000527916 MAPK8IP2Q13387 824 aaPredicted RBP10.68□□□□□ -0.7
CPSF1-203ENST00000527916 ANO6Q4KMQ2 910 aa10.68□□□□□ -0.7
CPSF1-203ENST00000527916 TMEM259Q4ZIN3 620 aa10.68□□□□□ -0.7
CPSF1-203ENST00000527916 PERM1Q5SV97 790 aa10.68□□□□□ -0.7
CPSF1-203ENST00000527916 SEL1L3Q68CR1 1132 aa10.68□□□□□ -0.7
CPSF1-203ENST00000527916 KIAA1161Q6NSJ0 714 aa10.68□□□□□ -0.7
CPSF1-203ENST00000527916 ESRP1Q6NXG1 681 aaKnown RBP10.68□□□□□ -0.7
CPSF1-203ENST00000527916 WDR59Q6PJI9 974 aa10.68□□□□□ -0.7
CPSF1-203ENST00000527916 ERN2Q76MJ5 926 aaKnown RBP10.68□□□□□ -0.7
CPSF1-203ENST00000527916 IRF2BP2Q7Z5L9 587 aa10.68□□□□□ -0.7
CPSF1-203ENST00000527916 TFAP2DQ7Z6R9 452 aa10.68□□□□□ -0.7
CPSF1-203ENST00000527916 ZSCAN30Q86W11 494 aa10.68□□□□□ -0.7
CPSF1-203ENST00000527916 NLRP14Q86W24 1093 aa10.68□□□□□ -0.7
CPSF1-203ENST00000527916 AOPEPQ8N6M6 819 aa10.68□□□□□ -0.7
CPSF1-203ENST00000527916 PCDH20Q8N6Y1 951 aaKnown RBP10.68□□□□□ -0.7
CPSF1-203ENST00000527916 OR7D4Q8NG98 312 aa10.68□□□□□ -0.7
CPSF1-203ENST00000527916 ISG20Q96AZ6 181 aaKnown RBP10.68□□□□□ -0.7
CPSF1-203ENST00000527916 PPP1R16AQ96I34 528 aa10.68□□□□□ -0.7
CPSF1-203ENST00000527916 FEM1CQ96JP0 617 aa10.68□□□□□ -0.7
CPSF1-203ENST00000527916 BMFQ96LC9 184 aa10.68□□□□□ -0.7
CPSF1-203ENST00000527916 CCDC3Q9BQI4 270 aa10.68□□□□□ -0.7
CPSF1-203ENST00000527916 HDAC8Q9BY41 377 aa10.68□□□□□ -0.7
CPSF1-203ENST00000527916 SLC17A9Q9BYT1 436 aa10.68□□□□□ -0.7
CPSF1-203ENST00000527916 MAGEH1Q9H213 219 aa10.68□□□□□ -0.7
CPSF1-203ENST00000527916 ADNPQ9H2P0 1102 aa10.68□□□□□ -0.7
CPSF1-203ENST00000527916 CAAP1Q9H8G2 361 aa10.68□□□□□ -0.7
CPSF1-203ENST00000527916 GPR27Q9NS67 375 aa10.68□□□□□ -0.7
CPSF1-203ENST00000527916 IGSF5Q9NSI5 407 aa10.68□□□□□ -0.7
CPSF1-203ENST00000527916 TMEM248Q9NWD8 314 aa10.68□□□□□ -0.7
CPSF1-203ENST00000527916 PCDHGA4Q9Y5G9 962 aa10.68□□□□□ -0.7
CPSF1-203ENST00000527916 ICE1Q9Y2F5 2266 aa10.68□□□□□ -0.7
CPSF1-203ENST00000527916 A0A1W2PQC6 194 aa10.67□□□□□ -0.7
CPSF1-203ENST00000527916 FAM170AA1A519 330 aa10.67□□□□□ -0.7
CPSF1-203ENST00000527916 POM121BA6NF01 834 aa10.67□□□□□ -0.7
CPSF1-203ENST00000527916 LMO7DNF2Z398 122 aa10.67□□□□□ -0.7
CPSF1-203ENST00000527916 FPGTO14772 594 aa10.67□□□□□ -0.7
CPSF1-203ENST00000527916 ZNF821O75541 412 aaPredicted RBP10.67□□□□□ -0.7
CPSF1-203ENST00000527916 CD160O95971 181 aa10.67□□□□□ -0.7
CPSF1-203ENST00000527916 ANXA6P08133 673 aa10.67□□□□□ -0.7
CPSF1-203ENST00000527916 PLEKP08567 350 aaPredicted RBP10.67□□□□□ -0.7
CPSF1-203ENST00000527916 RRM1P23921 792 aa10.67□□□□□ -0.7
CPSF1-203ENST00000527916 L1CAMP32004 1257 aa10.67□□□□□ -0.7
CPSF1-203ENST00000527916 RECQLP46063 649 aaPredicted RBP10.67□□□□□ -0.7
CPSF1-203ENST00000527916 SERPINH1P50454 418 aaKnown RBP10.67□□□□□ -0.7
CPSF1-203ENST00000527916 ZNF143P52747 638 aaPredicted RBP10.67□□□□□ -0.7
CPSF1-203ENST00000527916 PDX1P52945 283 aa10.67□□□□□ -0.7
CPSF1-203ENST00000527916 AIF1P55008 147 aa10.67□□□□□ -0.7
CPSF1-203ENST00000527916 GEMIN4P57678 1058 aaKnown RBP10.67□□□□□ -0.7
CPSF1-203ENST00000527916 ARF5P84085 180 aa10.67□□□□□ -0.7
CPSF1-203ENST00000527916 SGCGQ13326 291 aa10.67□□□□□ -0.7
CPSF1-203ENST00000527916 PDE1CQ14123 709 aaPredicted RBP10.67□□□□□ -0.7
CPSF1-203ENST00000527916 CDO1Q16878 200 aa10.67□□□□□ -0.7
CPSF1-203ENST00000527916 FILIP1LQ4L180 1135 aa10.67□□□□□ -0.7
CPSF1-203ENST00000527916 RAB6CQ53S08 254 aa10.67□□□□□ -0.7
CPSF1-203ENST00000527916 PPP1R15BQ5SWA1 713 aa10.67□□□□□ -0.7
CPSF1-203ENST00000527916 C22orf39Q6P5X5 142 aa10.67□□□□□ -0.7
CPSF1-203ENST00000527916 LINGO4Q6UY18 593 aa10.67□□□□□ -0.7
CPSF1-203ENST00000527916 SLFN11Q7Z7L1 901 aa10.67□□□□□ -0.7
CPSF1-203ENST00000527916 PHLDB2Q86SQ0 1253 aa10.67□□□□□ -0.7
CPSF1-203ENST00000527916 SLC35F3Q8IY50 421 aa10.67□□□□□ -0.7
CPSF1-203ENST00000527916 ZNF564Q8TBZ8 553 aaPredicted RBP10.67□□□□□ -0.7
CPSF1-203ENST00000527916 FAM172AQ8WUF8 416 aa10.67□□□□□ -0.7
CPSF1-203ENST00000527916 ARHGEF2Q92974 986 aaKnown RBP10.67□□□□□ -0.7
CPSF1-203ENST00000527916 TBC1D31Q96DN5 1066 aa10.67□□□□□ -0.7
CPSF1-203ENST00000527916 TMEM74Q96NL1 305 aa10.67□□□□□ -0.7
CPSF1-203ENST00000527916 GFM1Q96RP9 751 aaKnown RBP10.67□□□□□ -0.7
CPSF1-203ENST00000527916 SYT11Q9BT88 431 aa10.67□□□□□ -0.7
CPSF1-203ENST00000527916 SPON2Q9BUD6 331 aa10.67□□□□□ -0.7
CPSF1-203ENST00000527916 EDEM3Q9BZQ6 932 aa10.67□□□□□ -0.7
CPSF1-203ENST00000527916 RAB6CQ9H0N0 254 aa10.67□□□□□ -0.7
CPSF1-203ENST00000527916 ATP13A1Q9HD20 1204 aa10.67□□□□□ -0.7
CPSF1-203ENST00000527916 AIPL1Q9NZN9 384 aa10.67□□□□□ -0.7
CPSF1-203ENST00000527916 IL36AQ9UHA7 158 aa10.67□□□□□ -0.7
CPSF1-203ENST00000527916 PADI4Q9UM07 663 aa10.67□□□□□ -0.7
CPSF1-203ENST00000527916 ZFR2Q9UPR6 939 aaKnown RBP10.67□□□□□ -0.7
CPSF1-203ENST00000527916 NEU3Q9UQ49 428 aa10.67□□□□□ -0.7
CPSF1-203ENST00000527916 ITPR2Q14571 2701 aa10.66□□□□□ -0.7
CPSF1-203ENST00000527916 ANKRD62A6NC57 917 aa10.66□□□□□ -0.7
CPSF1-203ENST00000527916 WASH4PA8MWX3 477 aa10.66□□□□□ -0.7
CPSF1-203ENST00000527916 FAM72CH0Y354 149 aa10.66□□□□□ -0.7
CPSF1-203ENST00000527916 NTN3O00634 580 aaPredicted RBP10.66□□□□□ -0.7
CPSF1-203ENST00000527916 TEX33O43247 280 aa10.66□□□□□ -0.7
CPSF1-203ENST00000527916 LRIG2O94898 1065 aa10.66□□□□□ -0.7
CPSF1-203ENST00000527916 PAK4O96013 591 aaPredicted RBP10.66□□□□□ -0.7
CPSF1-203ENST00000527916 TNFAIP3P21580 790 aa10.66□□□□□ -0.7
CPSF1-203ENST00000527916 ZNF165P49910 485 aa10.66□□□□□ -0.7
CPSF1-203ENST00000527916 THOP1P52888 689 aa10.66□□□□□ -0.7
CPSF1-203ENST00000527916 ADKP55263 362 aaKnown RBP10.66□□□□□ -0.7
CPSF1-203ENST00000527916 PTK2BQ14289 1009 aa10.66□□□□□ -0.7
CPSF1-203ENST00000527916 CARD16Q5EG05 197 aa10.66□□□□□ -0.7
CPSF1-203ENST00000527916 PRRT3Q5FWE3 981 aa10.66□□□□□ -0.7
CPSF1-203ENST00000527916 ARSIQ5FYB1 569 aa10.66□□□□□ -0.7
CPSF1-203ENST00000527916 FAM72AQ5TYM5 149 aa10.66□□□□□ -0.7
CPSF1-203ENST00000527916 FAM72DQ6L9T8 149 aa10.66□□□□□ -0.7
CPSF1-203ENST00000527916 DNAJC24Q6P3W2 148 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms