RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 TMEM95Q3KNT9 176 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 SPDYE7PQ495Y7 208 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 AARS2Q5JTZ9 985 aaKnown RBP3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 TTC39AQ5SRH9 613 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 GRTP1Q5TC63 336 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 VWA5B1Q5TIE3 1220 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 FAM180BQ6P0A1 224 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 C16orf54Q6UWD8 224 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 KSR2Q6VAB6 950 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 RAD9BQ6WBX8 426 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 FRA10AC1Q70Z53 315 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 BTN2A1Q7KYR7 527 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 MIGA2Q7L4E1 593 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 MAPKAPK5Q8IW41 473 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 SLC44A2Q8IWA5 706 aaPredicted RBP3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 C12orf56Q8IXR9 622 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 ELMOD2Q8IZ81 293 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 LINC00518Q8N0U6 118 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 CENPSQ8N2Z9 138 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 AFAP1L2Q8N4X5 818 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 ZNF565Q8N9K5 539 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 XXYLT1Q8NBI6 393 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 ZNF680Q8NEM1 530 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 OR56A1Q8NGH5 318 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 ZFP28Q8NHY6 868 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 TEX47Q8TBZ9 253 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 OTUD7AQ8TE49 926 aaPredicted RBP3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 DDI1Q8WTU0 396 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 ZNF606Q8WXB4 792 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 RAPGEF4Q8WZA2 1011 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 FATE1Q969F0 183 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 TLCD1Q96CP7 247 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 FAR2Q96K12 515 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 ART5Q96L15 291 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 ZNF641Q96N77 438 aaPredicted RBP3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 TTC25Q96NG3 672 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 NELL2Q99435 816 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 DESI2Q9BSY9 194 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 WACQ9BTA9 647 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 ISCA1Q9BUE6 129 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 DDX23Q9BUQ8 820 aaKnown RBP3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 C9orf16Q9BUW7 83 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 NUP85Q9BW27 656 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 GON7Q9BXV9 100 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 STMN4Q9H169 189 aaPredicted RBP3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 HSD3B7Q9H2F3 369 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 OR51B5Q9H339 312 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 DPEP3Q9H4B8 488 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 SH2D4AQ9H788 454 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 DBNDD1Q9H9R9 158 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 SIAEQ9HAT2 523 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 MRM3Q9HC36 420 aaKnown RBP3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 GDF3Q9NR23 364 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 POLE3Q9NRF9 147 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 TMEM74BQ9NUR3 256 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 INTS9Q9NV88 658 aaKnown RBP3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 KLHL11Q9NVR0 708 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 ASNSD1Q9NWL6 643 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 TRNAU1APQ9NX07 287 aaKnown RBP3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 SENP1Q9P0U3 644 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 TBC1D14Q9P2M4 693 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 LRIT1Q9P2V4 623 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 STX18Q9P2W9 335 aaKnown RBP3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 DPP7Q9UHL4 492 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 VPS51Q9UID3 782 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 TUBE1Q9UJT0 475 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 FBXO2Q9UK22 296 aaPredicted RBP3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 GMEB2Q9UKD1 530 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 ANGPTL2Q9UKU9 493 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 NUP50Q9UKX7 468 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 PADI4Q9UM07 663 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 USP18Q9UMW8 372 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 EDARQ9UNE0 448 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 SNX7Q9UNH6 387 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 POLHQ9Y253 713 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 ARL2BPQ9Y2Y0 163 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 TBX22Q9Y458 520 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 KIF20BQ96Q89 1820 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 ANKARQ7Z5J8 1434 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 PCM1Q15154 2024 aa3.77□□□□□ -1.81
CLNS1A-209ENST00000527299 KIAA0586Q9BVV6 1533 aa3.77□□□□□ -1.81
CLNS1A-209ENST00000527299 SYNJ2BP-COX16A0A087WUM0 186 aa3.77□□□□□ -1.81
CLNS1A-209ENST00000527299 A0A0U1RQJ8 604 aa3.77□□□□□ -1.81
CLNS1A-209ENST00000527299 A0A1B0GWJ7 208 aa3.77□□□□□ -1.81
CLNS1A-209ENST00000527299 ILVBLA1L0T0 632 aa3.77□□□□□ -1.81
CLNS1A-209ENST00000527299 ARHGEF35A5YM69 484 aa3.77□□□□□ -1.81
CLNS1A-209ENST00000527299 FAM221BA6H8Z2 402 aa3.77□□□□□ -1.81
CLNS1A-209ENST00000527299 A8MX80 341 aa3.77□□□□□ -1.81
CLNS1A-209ENST00000527299 H0YGN5 161 aa3.77□□□□□ -1.81
CLNS1A-209ENST00000527299 H3BUI4 141 aa3.77□□□□□ -1.81
CLNS1A-209ENST00000527299 K7EPI3 171 aa3.77□□□□□ -1.81
CLNS1A-209ENST00000527299 CBX4O00257 560 aa3.77□□□□□ -1.81
CLNS1A-209ENST00000527299 PLOD2O00469 737 aa3.77□□□□□ -1.81
CLNS1A-209ENST00000527299 VWA5AO00534 786 aa3.77□□□□□ -1.81
CLNS1A-209ENST00000527299 KPNA4O00629 521 aaPredicted RBP3.77□□□□□ -1.81
CLNS1A-209ENST00000527299 PLD2O14939 933 aa3.77□□□□□ -1.81
CLNS1A-209ENST00000527299 ACOX3O15254 700 aa3.77□□□□□ -1.81
CLNS1A-209ENST00000527299 MAPK13O15264 365 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms