RNA–Protein interactions for RNA: ENST00000525592.1

TM9SF1-204, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-204ENST00000525592 SEPT3Q9UH03 358 aa20.23■□□□□ 0.83
TM9SF1-204ENST00000525592 NEMP2A6NFY4 417 aa20.22■□□□□ 0.83
TM9SF1-204ENST00000525592 H3BM21 787 aa20.22■□□□□ 0.83
TM9SF1-204ENST00000525592 MMP20O60882 483 aa20.22■□□□□ 0.83
TM9SF1-204ENST00000525592 CSF2P04141 144 aa20.22■□□□□ 0.83
TM9SF1-204ENST00000525592 ALPPL2P10696 532 aa20.22■□□□□ 0.83
TM9SF1-204ENST00000525592 SERPINB6P35237 376 aa20.22■□□□□ 0.83
TM9SF1-204ENST00000525592 RENBPP51606 427 aa20.22■□□□□ 0.83
TM9SF1-204ENST00000525592 PDE1CQ14123 709 aaPredicted RBP20.22■□□□□ 0.83
TM9SF1-204ENST00000525592 ERAP2Q6P179 960 aa20.22■□□□□ 0.83
TM9SF1-204ENST00000525592 ARHGAP36Q6ZRI8 547 aa20.22■□□□□ 0.83
TM9SF1-204ENST00000525592 PSKH2Q96QS6 385 aa20.22■□□□□ 0.83
TM9SF1-204ENST00000525592 DNAJC7Q99615 494 aa20.22■□□□□ 0.83
TM9SF1-204ENST00000525592 UCKL1Q9NWZ5 548 aa20.22■□□□□ 0.83
TM9SF1-204ENST00000525592 LCMT1Q9UIC8 334 aa20.22■□□□□ 0.83
TM9SF1-204ENST00000525592 ANKRD11Q6UB99 2663 aaPredicted RBP20.21■□□□□ 0.83
TM9SF1-204ENST00000525592 CFAP47Q6ZTR5 3102 aa20.21■□□□□ 0.83
TM9SF1-204ENST00000525592 GOLGA4Q13439 2230 aaKnown RBP20.21■□□□□ 0.83
TM9SF1-204ENST00000525592 TRIM38O00635 465 aa20.21■□□□□ 0.83
TM9SF1-204ENST00000525592 SIGLEC6O43699 453 aa20.21■□□□□ 0.83
TM9SF1-204ENST00000525592 BUB1BO60566 1050 aaPredicted RBP20.21■□□□□ 0.83
TM9SF1-204ENST00000525592 CAPNS1P04632 268 aa20.21■□□□□ 0.83
TM9SF1-204ENST00000525592 ACP1P24666 158 aa20.21■□□□□ 0.83
TM9SF1-204ENST00000525592 HNF1BP35680 557 aa20.21■□□□□ 0.83
TM9SF1-204ENST00000525592 HSPA9P38646 679 aaKnown RBP20.21■□□□□ 0.83
TM9SF1-204ENST00000525592 EIF4A3P38919 411 aaKnown RBP20.21■□□□□ 0.83
TM9SF1-204ENST00000525592 RGRP47804 291 aa20.21■□□□□ 0.83
TM9SF1-204ENST00000525592 AP1S1P61966 158 aa20.21■□□□□ 0.83
TM9SF1-204ENST00000525592 YPEL5P62699 121 aa20.21■□□□□ 0.83
TM9SF1-204ENST00000525592 PTK2BQ14289 1009 aa20.21■□□□□ 0.83
TM9SF1-204ENST00000525592 SLC18A3Q16572 532 aa20.21■□□□□ 0.83
TM9SF1-204ENST00000525592 HADHQ16836 314 aaKnown RBP20.21■□□□□ 0.83
TM9SF1-204ENST00000525592 CAMK1DQ8IU85 385 aa20.21■□□□□ 0.83
TM9SF1-204ENST00000525592 OR8K1Q8NGG5 319 aa20.21■□□□□ 0.83
TM9SF1-204ENST00000525592 ZNF564Q8TBZ8 553 aaPredicted RBP20.21■□□□□ 0.83
TM9SF1-204ENST00000525592 ECHDC3Q96DC8 303 aa20.21■□□□□ 0.83
TM9SF1-204ENST00000525592 BTBD6Q96KE9 485 aa20.21■□□□□ 0.83
TM9SF1-204ENST00000525592 WRAP53Q9BUR4 548 aaKnown RBP20.21■□□□□ 0.83
TM9SF1-204ENST00000525592 DUSP23Q9BVJ7 150 aa20.21■□□□□ 0.83
TM9SF1-204ENST00000525592 TSPY26PQ9H489 355 aa20.21■□□□□ 0.83
TM9SF1-204ENST00000525592 PCDH18Q9HCL0 1135 aa20.21■□□□□ 0.83
TM9SF1-204ENST00000525592 PCDH12Q9NPG4 1184 aa20.21■□□□□ 0.83
TM9SF1-204ENST00000525592 NLGN3Q9NZ94 848 aa20.21■□□□□ 0.83
TM9SF1-204ENST00000525592 UVRAGQ9P2Y5 699 aa20.21■□□□□ 0.83
TM9SF1-204ENST00000525592 ZFHX4Q86UP3 3567 aa20.2■□□□□ 0.82
TM9SF1-204ENST00000525592 TDRD6O60522 2096 aaKnown RBP20.2■□□□□ 0.82
TM9SF1-204ENST00000525592 ANKRD36A6QL64 1941 aa20.2■□□□□ 0.82
TM9SF1-204ENST00000525592 RIOK3O14730 519 aaKnown RBP20.2■□□□□ 0.82
TM9SF1-204ENST00000525592 SCAMP1O15126 338 aa20.2■□□□□ 0.82
TM9SF1-204ENST00000525592 TPM1P09493 284 aa20.2■□□□□ 0.82
TM9SF1-204ENST00000525592 AMPD1P23109 780 aa20.2■□□□□ 0.82
TM9SF1-204ENST00000525592 IGFALSP35858 605 aa20.2■□□□□ 0.82
TM9SF1-204ENST00000525592 MMP12P39900 470 aa20.2■□□□□ 0.82
TM9SF1-204ENST00000525592 THOP1P52888 689 aa20.2■□□□□ 0.82
TM9SF1-204ENST00000525592 BCL2L1Q07817 233 aa20.2■□□□□ 0.82
TM9SF1-204ENST00000525592 LBRQ14739 615 aaKnown RBP20.2■□□□□ 0.82
TM9SF1-204ENST00000525592 TXNRD3NBQ6F5E7 133 aa20.2■□□□□ 0.82
TM9SF1-204ENST00000525592 PROSER1Q86XN7 944 aa20.2■□□□□ 0.82
TM9SF1-204ENST00000525592 TP53I13Q8NBR0 393 aaPredicted RBP20.2■□□□□ 0.82
TM9SF1-204ENST00000525592 ZNF548Q8NEK5 533 aaPredicted RBP20.2■□□□□ 0.82
TM9SF1-204ENST00000525592 FAM71BQ8TC56 605 aa20.2■□□□□ 0.82
TM9SF1-204ENST00000525592 CTNNBL1Q8WYA6 563 aaPredicted RBP20.2■□□□□ 0.82
TM9SF1-204ENST00000525592 CCDC86Q9H6F5 360 aaKnown RBP20.2■□□□□ 0.82
TM9SF1-204ENST00000525592 ETNK2Q9NVF9 386 aa20.2■□□□□ 0.82
TM9SF1-204ENST00000525592 ZNHIT6Q9NWK9 470 aaKnown RBP20.2■□□□□ 0.82
TM9SF1-204ENST00000525592 ATP8A1Q9Y2Q0 1164 aa20.2■□□□□ 0.82
TM9SF1-204ENST00000525592 CSNK1G3Q9Y6M4 447 aa20.2■□□□□ 0.82
TM9SF1-204ENST00000525592 SSU72P8A0A1W2PR75 194 aa20.19■□□□□ 0.82
TM9SF1-204ENST00000525592 CFAP69A5D8W1 941 aa20.19■□□□□ 0.82
TM9SF1-204ENST00000525592 SRRM3A6NNA2 597 aaPredicted RBP20.19■□□□□ 0.82
TM9SF1-204ENST00000525592 FFAR2O15552 330 aa20.19■□□□□ 0.82
TM9SF1-204ENST00000525592 H2AFZP0C0S5 128 aa20.19■□□□□ 0.82
TM9SF1-204ENST00000525592 ITIH2P19823 946 aa20.19■□□□□ 0.82
TM9SF1-204ENST00000525592 CDH6P55285 790 aa20.19■□□□□ 0.82
TM9SF1-204ENST00000525592 POLR2LP62875 67 aaKnown RBP20.19■□□□□ 0.82
TM9SF1-204ENST00000525592 KRT81Q14533 505 aa20.19■□□□□ 0.82
TM9SF1-204ENST00000525592 ZNF235Q14590 738 aa20.19■□□□□ 0.82
TM9SF1-204ENST00000525592 AGERQ15109 404 aa20.19■□□□□ 0.82
TM9SF1-204ENST00000525592 ZNF542PQ5EBM4 170 aa20.19■□□□□ 0.82
TM9SF1-204ENST00000525592 H2AFVQ71UI9 128 aa20.19■□□□□ 0.82
TM9SF1-204ENST00000525592 TP53INP2Q8IXH6 220 aa20.19■□□□□ 0.82
TM9SF1-204ENST00000525592 BBS5Q8N3I7 341 aa20.19■□□□□ 0.82
TM9SF1-204ENST00000525592 ATPAF2Q8N5M1 289 aa20.19■□□□□ 0.82
TM9SF1-204ENST00000525592 BTN2A2Q8WVV5 523 aa20.19■□□□□ 0.82
TM9SF1-204ENST00000525592 SPOCK2Q92563 424 aa20.19■□□□□ 0.82
TM9SF1-204ENST00000525592 DEF6Q9H4E7 631 aa20.19■□□□□ 0.82
TM9SF1-204ENST00000525592 USP29Q9HBJ7 922 aa20.19■□□□□ 0.82
TM9SF1-204ENST00000525592 EVA1BQ9NVM1 165 aa20.19■□□□□ 0.82
TM9SF1-204ENST00000525592 CTTNBP2NLQ9P2B4 639 aa20.19■□□□□ 0.82
TM9SF1-204ENST00000525592 DKK4Q9UBT3 224 aa20.19■□□□□ 0.82
TM9SF1-204ENST00000525592 CHD6Q8TD26 2715 aa20.19■□□□□ 0.82
TM9SF1-204ENST00000525592 PKD1L2Q7Z442 2459 aa20.19■□□□□ 0.82
TM9SF1-204ENST00000525592 KNTC1P50748 2209 aa20.19■□□□□ 0.82
TM9SF1-204ENST00000525592 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.18■□□□□ 0.82
TM9SF1-204ENST00000525592 MUSKO15146 869 aa20.18■□□□□ 0.82
TM9SF1-204ENST00000525592 GIMD1P0DJR0 217 aa20.18■□□□□ 0.82
TM9SF1-204ENST00000525592 CKMT1AP12532 417 aa20.18■□□□□ 0.82
TM9SF1-204ENST00000525592 C6P13671 934 aa20.18■□□□□ 0.82
TM9SF1-204ENST00000525592 SSR1P43307 286 aaKnown RBP20.18■□□□□ 0.82
TM9SF1-204ENST00000525592 SCNN1BP51168 640 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms