RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 GAS1P54826 345 aa4.13□□□□□ -1.75
CD44-217ENST00000525348 BRWD1-AS2P59051 145 aa4.13□□□□□ -1.75
CD44-217ENST00000525348 DDR1Q08345 913 aa4.13□□□□□ -1.75
CD44-217ENST00000525348 TBL3Q12788 808 aaKnown RBP4.13□□□□□ -1.75
CD44-217ENST00000525348 MYBPHQ13203 477 aa4.13□□□□□ -1.75
CD44-217ENST00000525348 SOWAHAQ2M3V2 549 aa4.13□□□□□ -1.75
CD44-217ENST00000525348 EDRF1Q3B7T1 1238 aa4.13□□□□□ -1.75
CD44-217ENST00000525348 ESCO2Q56NI9 601 aa4.13□□□□□ -1.75
CD44-217ENST00000525348 EFHC1Q5JVL4 640 aa4.13□□□□□ -1.75
CD44-217ENST00000525348 NR2C2APQ86WQ0 139 aa4.13□□□□□ -1.75
CD44-217ENST00000525348 PLD5Q8N7P1 536 aa4.13□□□□□ -1.75
CD44-217ENST00000525348 ZSCAN31Q96LW9 406 aaPredicted RBP4.13□□□□□ -1.75
CD44-217ENST00000525348 CD180Q99467 661 aa4.13□□□□□ -1.75
CD44-217ENST00000525348 LBHD1Q9BQE6 289 aaPredicted RBP4.13□□□□□ -1.75
CD44-217ENST00000525348 CYSLTR2Q9NS75 346 aa4.13□□□□□ -1.75
CD44-217ENST00000525348 ALKBH4Q9NXW9 302 aa4.13□□□□□ -1.75
CD44-217ENST00000525348 PCDHGB5Q9Y5G0 923 aa4.13□□□□□ -1.75
CD44-217ENST00000525348 A0A087WYN8 130 aa4.12□□□□□ -1.75
CD44-217ENST00000525348 PLSCR5A0PG75 271 aa4.12□□□□□ -1.75
CD44-217ENST00000525348 ARHGAP10A1A4S6 786 aa4.12□□□□□ -1.75
CD44-217ENST00000525348 HSPA12AO43301 675 aa4.12□□□□□ -1.75
CD44-217ENST00000525348 KLK8O60259 260 aa4.12□□□□□ -1.75
CD44-217ENST00000525348 FMO4P31512 558 aa4.12□□□□□ -1.75
CD44-217ENST00000525348 UBE3AQ05086 875 aa4.12□□□□□ -1.75
CD44-217ENST00000525348 CHRNDQ07001 517 aa4.12□□□□□ -1.75
CD44-217ENST00000525348 KIF19Q2TAC6 998 aa4.12□□□□□ -1.75
CD44-217ENST00000525348 DCAF6Q58WW2 860 aa4.12□□□□□ -1.75
CD44-217ENST00000525348 XKR9Q5GH70 373 aa4.12□□□□□ -1.75
CD44-217ENST00000525348 FAM76BQ5HYJ3 339 aa4.12□□□□□ -1.75
CD44-217ENST00000525348 LRRC8EQ6NSJ5 796 aa4.12□□□□□ -1.75
CD44-217ENST00000525348 CES5AQ6NT32 575 aa4.12□□□□□ -1.75
CD44-217ENST00000525348 SPSB3Q6PJ21 355 aa4.12□□□□□ -1.75
CD44-217ENST00000525348 ADGRG6Q86SQ4 1221 aa4.12□□□□□ -1.75
CD44-217ENST00000525348 LRRTM4Q86VH4 590 aa4.12□□□□□ -1.75
CD44-217ENST00000525348 GJC3Q8NFK1 279 aa4.12□□□□□ -1.75
CD44-217ENST00000525348 SNAPC3Q92966 411 aa4.12□□□□□ -1.75
CD44-217ENST00000525348 ERGIC1Q969X5 290 aa4.12□□□□□ -1.75
CD44-217ENST00000525348 SCMH1Q96GD3 660 aa4.12□□□□□ -1.75
CD44-217ENST00000525348 PKP4Q99569 1192 aa4.12□□□□□ -1.75
CD44-217ENST00000525348 TMEM160Q9NX00 188 aa4.12□□□□□ -1.75
CD44-217ENST00000525348 PEMTQ9UBM1 199 aa4.12□□□□□ -1.75
CD44-217ENST00000525348 CTNNAL1Q9UBT7 734 aa4.12□□□□□ -1.75
CD44-217ENST00000525348 A3GALT2U3KPV4 340 aa4.12□□□□□ -1.75
CD44-217ENST00000525348 IGLV5-37A0A075B6J1 123 aa4.11□□□□□ -1.75
CD44-217ENST00000525348 TYW5A2RUC4 315 aaKnown RBP4.11□□□□□ -1.75
CD44-217ENST00000525348 CPED1A4D0V7 1026 aa4.11□□□□□ -1.75
CD44-217ENST00000525348 URODP06132 367 aa4.11□□□□□ -1.75
CD44-217ENST00000525348 ILF3Q12906 894 aaKnown RBP eCLIP4.11□□□□□ -1.75
CD44-217ENST00000525348 SF3B4Q15427 424 aaKnown RBP eCLIP4.11□□□□□ -1.75
CD44-217ENST00000525348 EFNB3Q15768 340 aa4.11□□□□□ -1.75
CD44-217ENST00000525348 RHBDF2Q6PJF5 856 aa4.11□□□□□ -1.75
CD44-217ENST00000525348 CUZD1Q86UP6 607 aa4.11□□□□□ -1.75
CD44-217ENST00000525348 NOXA1Q86UR1 476 aa4.11□□□□□ -1.75
CD44-217ENST00000525348 FAM160B2Q86V87 743 aa4.11□□□□□ -1.75
CD44-217ENST00000525348 PARP16Q8N5Y8 322 aa4.11□□□□□ -1.75
CD44-217ENST00000525348 GPATCH11Q8N954 259 aa4.11□□□□□ -1.75
CD44-217ENST00000525348 ADGRG7Q96K78 797 aa4.11□□□□□ -1.75
CD44-217ENST00000525348 NUF2Q9BZD4 464 aa4.11□□□□□ -1.75
CD44-217ENST00000525348 NOX4Q9NPH5 578 aa4.11□□□□□ -1.75
CD44-217ENST00000525348 SNTG1Q9NSN8 517 aa4.11□□□□□ -1.75
CD44-217ENST00000525348 SLC9A2Q9UBY0 812 aa4.11□□□□□ -1.75
CD44-217ENST00000525348 DGKBQ9Y6T7 804 aa4.11□□□□□ -1.75
CD44-217ENST00000525348 ARID4BQ4LE39 1312 aaPredicted RBP4.11□□□□□ -1.75
CD44-217ENST00000525348 SLC16A5O15375 505 aa4.1□□□□□ -1.75
CD44-217ENST00000525348 PTMAP06454 111 aaKnown RBP4.1□□□□□ -1.75
CD44-217ENST00000525348 IGHV4-30-4P0DP06 118 aa4.1□□□□□ -1.75
CD44-217ENST00000525348 SLC2A4P14672 509 aa4.1□□□□□ -1.75
CD44-217ENST00000525348 ZNF8P17098 575 aaPredicted RBP4.1□□□□□ -1.75
CD44-217ENST00000525348 PTPN2P17706 415 aa4.1□□□□□ -1.75
CD44-217ENST00000525348 PTMSP20962 102 aa4.1□□□□□ -1.75
CD44-217ENST00000525348 CNTFP26441 200 aa4.1□□□□□ -1.75
CD44-217ENST00000525348 DLG1Q12959 904 aa4.1□□□□□ -1.75
CD44-217ENST00000525348 RUNX2Q13950 521 aa4.1□□□□□ -1.75
CD44-217ENST00000525348 SLC39A14Q15043 492 aa4.1□□□□□ -1.75
CD44-217ENST00000525348 CYP26C1Q6V0L0 522 aa4.1□□□□□ -1.75
CD44-217ENST00000525348 Q6ZTC4 211 aa4.1□□□□□ -1.75
CD44-217ENST00000525348 SHFQ7M4L6 423 aa4.1□□□□□ -1.75
CD44-217ENST00000525348 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.1□□□□□ -1.75
CD44-217ENST00000525348 TBC1D26Q86UD7 250 aa4.1□□□□□ -1.75
CD44-217ENST00000525348 KIAA2013Q8IYS2 634 aa4.1□□□□□ -1.75
CD44-217ENST00000525348 WFIKKN2Q8TEU8 576 aa4.1□□□□□ -1.75
CD44-217ENST00000525348 GCC1Q96CN9 775 aa4.1□□□□□ -1.75
CD44-217ENST00000525348 ZNF830Q96NB3 372 aaPredicted RBP4.1□□□□□ -1.75
CD44-217ENST00000525348 HEMGNQ9BXL5 484 aa4.1□□□□□ -1.75
CD44-217ENST00000525348 DDX4Q9NQI0 724 aaKnown RBP4.1□□□□□ -1.75
CD44-217ENST00000525348 GGA3Q9NZ52 723 aa4.1□□□□□ -1.75
CD44-217ENST00000525348 HSPB7Q9UBY9 170 aa4.1□□□□□ -1.75
CD44-217ENST00000525348 KCNG2Q9UJ96 466 aa4.1□□□□□ -1.75
CD44-217ENST00000525348 LOC102724159A0A0B4J2E5 919 aa4.09□□□□□ -1.75
CD44-217ENST00000525348 WNT9BO14905 357 aa4.09□□□□□ -1.75
CD44-217ENST00000525348 SNRNP70P08621 437 aaKnown RBP4.09□□□□□ -1.75
CD44-217ENST00000525348 NR1H2P55055 460 aa4.09□□□□□ -1.75
CD44-217ENST00000525348 HDAC4P56524 1084 aa4.09□□□□□ -1.75
CD44-217ENST00000525348 KRTAP10-6P60371 365 aaPredicted RBP4.09□□□□□ -1.75
CD44-217ENST00000525348 YWHAZP63104 245 aaKnown RBP4.09□□□□□ -1.75
CD44-217ENST00000525348 GRIK3Q13003 919 aa4.09□□□□□ -1.75
CD44-217ENST00000525348 SNTA1Q13424 505 aa4.09□□□□□ -1.75
CD44-217ENST00000525348 ARHGEF6Q15052 776 aa4.09□□□□□ -1.75
CD44-217ENST00000525348 PWP2Q15269 919 aaKnown RBP4.09□□□□□ -1.75
CD44-217ENST00000525348 ZNF766Q5HY98 468 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms