RNA–Protein interactions for RNA: ENST00000523514.1

FAM49B-227, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 4

Gene FAM49B, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-227ENST00000523514 TRIM69Q86WT6 500 aa7.84□□□□□ -1.15
FAM49B-227ENST00000523514 CPNE8Q86YQ8 564 aa7.84□□□□□ -1.15
FAM49B-227ENST00000523514 KATNAL2Q8IYT4 538 aa7.84□□□□□ -1.15
FAM49B-227ENST00000523514 SYCE1Q8N0S2 351 aa7.84□□□□□ -1.15
FAM49B-227ENST00000523514 ZCCHC9Q8N567 271 aaKnown RBP7.84□□□□□ -1.15
FAM49B-227ENST00000523514 DEFB119Q8N690 84 aa7.84□□□□□ -1.15
FAM49B-227ENST00000523514 PCDH19Q8TAB3 1148 aa7.84□□□□□ -1.15
FAM49B-227ENST00000523514 NETO1Q8TDF5 533 aa7.84□□□□□ -1.15
FAM49B-227ENST00000523514 HCAR2Q8TDS4 363 aa7.84□□□□□ -1.15
FAM49B-227ENST00000523514 ANP32BQ92688 251 aaKnown RBP7.84□□□□□ -1.15
FAM49B-227ENST00000523514 FATE1Q969F0 183 aa7.84□□□□□ -1.15
FAM49B-227ENST00000523514 BIRC7Q96CA5 298 aa7.84□□□□□ -1.15
FAM49B-227ENST00000523514 RBM41Q96IZ5 413 aaKnown RBP7.84□□□□□ -1.15
FAM49B-227ENST00000523514 RNF157Q96PX1 679 aa7.84□□□□□ -1.15
FAM49B-227ENST00000523514 TUBGCP5Q96RT8 1024 aa7.84□□□□□ -1.15
FAM49B-227ENST00000523514 CPEB1Q9BZB8 566 aaKnown RBP7.84□□□□□ -1.15
FAM49B-227ENST00000523514 TSGA10Q9BZW7 698 aa7.84□□□□□ -1.15
FAM49B-227ENST00000523514 ZDHHC5Q9C0B5 715 aa7.84□□□□□ -1.15
FAM49B-227ENST00000523514 ATP13A3Q9H7F0 1226 aa7.84□□□□□ -1.15
FAM49B-227ENST00000523514 KLHL11Q9NVR0 708 aa7.84□□□□□ -1.15
FAM49B-227ENST00000523514 DKK3Q9UBP4 350 aa7.84□□□□□ -1.15
FAM49B-227ENST00000523514 LHX3Q9UBR4 397 aa7.84□□□□□ -1.15
FAM49B-227ENST00000523514 AMACRQ9UHK6 382 aa7.84□□□□□ -1.15
FAM49B-227ENST00000523514 DCTN4Q9UJW0 460 aa7.84□□□□□ -1.15
FAM49B-227ENST00000523514 DMTF1Q9Y222 760 aa7.84□□□□□ -1.15
FAM49B-227ENST00000523514 REXO2Q9Y3B8 237 aaKnown RBP7.84□□□□□ -1.15
FAM49B-227ENST00000523514 ACTL7AQ9Y615 435 aa7.84□□□□□ -1.15
FAM49B-227ENST00000523514 ALG6Q9Y672 507 aa7.84□□□□□ -1.15
FAM49B-227ENST00000523514 ANKRD36A6QL64 1941 aa7.84□□□□□ -1.16
FAM49B-227ENST00000523514 TBC1D3DA0A087WVF3 549 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 TBC1D3IA0A087WXS9 549 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 TBC1D3EA0A087X179 549 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 TBC1D3KA0A087X1G2 549 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.83□□□□□ -1.16
FAM49B-227ENST00000523514 A0A1W2PPC4 97 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 A0A1W2PQ67 120 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 LNP1A1A4G5 178 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 CCDC66A2RUB6 948 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 TBC1D3FA6NER0 549 aaPredicted RBP7.83□□□□□ -1.16
FAM49B-227ENST00000523514 C10orf142B7Z368 130 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 TBC1D3LB9A6J9 549 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 APOL1O14791 398 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 PPP1R12AO14974 1030 aaPredicted RBP7.83□□□□□ -1.16
FAM49B-227ENST00000523514 BCAT2O15382 392 aaPredicted RBP7.83□□□□□ -1.16
FAM49B-227ENST00000523514 LATO43561 262 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 TSPAN6O43657 245 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 KRT86O43790 486 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 MAFKO60675 156 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 RNGTTO60942 597 aaKnown RBP7.83□□□□□ -1.16
FAM49B-227ENST00000523514 ZRANB2O95218 330 aaKnown RBP eCLIP7.83□□□□□ -1.16
FAM49B-227ENST00000523514 UGT2B4P06133 528 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 IGHV4-34P06331 123 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 TBC1D3HP0C7X1 549 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 TNNT1P13805 278 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 ADRB3P13945 408 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 CCNCP24863 283 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 NFKBIAP25963 317 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 SERPINA4P29622 427 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 CTNNA1P35221 906 aaKnown RBP7.83□□□□□ -1.16
FAM49B-227ENST00000523514 CETN2P41208 172 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 GRIA4P48058 902 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 METAP1P53582 386 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 ATXN3P54252 364 aaPredicted RBP7.83□□□□□ -1.16
FAM49B-227ENST00000523514 ELP6Q0PNE2 266 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 CLN3Q13286 438 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 HNRNPDQ14103 355 aaKnown RBP7.83□□□□□ -1.16
FAM49B-227ENST00000523514 PDK1Q15118 436 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 SF3A2Q15428 464 aaKnown RBP7.83□□□□□ -1.16
FAM49B-227ENST00000523514 CYTH1Q15438 398 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 CCDC6Q16204 474 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 SETMARQ53H47 684 aaPredicted RBP7.83□□□□□ -1.16
FAM49B-227ENST00000523514 SLC45A4Q5BKX6 768 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 TFDP3Q5H9I0 405 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 MARC1Q5VT66 337 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 SLC9A4Q6AI14 798 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 TBC1D3GQ6DHY5 549 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 TBC1D3CQ6IPX1 549 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 KIAA1161Q6NSJ0 714 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 BRAT1Q6PJG6 821 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 IL27RAQ6UWB1 636 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 ARHGAP36Q6ZRI8 547 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 PARS2Q7L3T8 475 aaKnown RBP7.83□□□□□ -1.16
FAM49B-227ENST00000523514 SRLQ86TD4 932 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 PRPF39Q86UA1 669 aaKnown RBP7.83□□□□□ -1.16
FAM49B-227ENST00000523514 RFX6Q8HWS3 928 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 RCOR2Q8IZ40 523 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 TBC1D3Q8IZP1 549 aaPredicted RBP7.83□□□□□ -1.16
FAM49B-227ENST00000523514 RNF10Q8N5U6 811 aaKnown RBP7.83□□□□□ -1.16
FAM49B-227ENST00000523514 PQLC3Q8N755 202 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 OR6K2Q8NGY2 324 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 EXD1Q8NHP7 514 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 KIAA1524Q8TCG1 905 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 RAPGEF5Q92565 580 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 ARRDC3Q96B67 414 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 SKA1Q96BD8 255 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 HDAC11Q96DB2 347 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 EXOC2Q96KP1 924 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 ZNF641Q96N77 438 aaPredicted RBP7.83□□□□□ -1.16
FAM49B-227ENST00000523514 TSGA13Q96PP4 275 aa7.83□□□□□ -1.16
FAM49B-227ENST00000523514 DESI2Q9BSY9 194 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms