RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 FPGTO14772 594 aa18.04■□□□□ 0.48
TRAPPC9-211ENST00000521700 TNFSF14O43557 240 aa18.04■□□□□ 0.48
TRAPPC9-211ENST00000521700 TM7SF2O76062 418 aa18.04■□□□□ 0.48
TRAPPC9-211ENST00000521700 MTA2O94776 668 aa18.04■□□□□ 0.48
TRAPPC9-211ENST00000521700 KRT7P08729 469 aa18.04■□□□□ 0.48
TRAPPC9-211ENST00000521700 SERPINA4P29622 427 aa18.04■□□□□ 0.48
TRAPPC9-211ENST00000521700 BCL2L1Q07817 233 aa18.04■□□□□ 0.48
TRAPPC9-211ENST00000521700 PDK2Q15119 407 aa18.04■□□□□ 0.48
TRAPPC9-211ENST00000521700 ANKRD20A8PQ5CZ79 823 aa18.04■□□□□ 0.48
TRAPPC9-211ENST00000521700 BRAT1Q6PJG6 821 aa18.04■□□□□ 0.48
TRAPPC9-211ENST00000521700 KDM7AQ6ZMT4 941 aa18.04■□□□□ 0.48
TRAPPC9-211ENST00000521700 PTAR1Q7Z6K3 402 aaPredicted RBP18.04■□□□□ 0.48
TRAPPC9-211ENST00000521700 DCP2Q8IU60 420 aaKnown RBP18.04■□□□□ 0.48
TRAPPC9-211ENST00000521700 PGBD5Q8N414 524 aa18.04■□□□□ 0.48
TRAPPC9-211ENST00000521700 ATPAF2Q8N5M1 289 aa18.04■□□□□ 0.48
TRAPPC9-211ENST00000521700 EID2Q8N6I1 236 aa18.04■□□□□ 0.48
TRAPPC9-211ENST00000521700 ECHDC3Q96DC8 303 aa18.04■□□□□ 0.48
TRAPPC9-211ENST00000521700 ZNF670Q9BS34 389 aa18.04■□□□□ 0.48
TRAPPC9-211ENST00000521700 CAAP1Q9H8G2 361 aa18.04■□□□□ 0.48
TRAPPC9-211ENST00000521700 KLK13Q9UKR3 277 aa18.04■□□□□ 0.48
TRAPPC9-211ENST00000521700 CHD8Q9HCK8 2581 aa18.04■□□□□ 0.48
TRAPPC9-211ENST00000521700 SHROOM3Q8TF72 1996 aa18.03■□□□□ 0.48
TRAPPC9-211ENST00000521700 GOLGA8CPA6NN73 597 aa18.03■□□□□ 0.48
TRAPPC9-211ENST00000521700 TRAFD1O14545 582 aaPredicted RBP18.03■□□□□ 0.48
TRAPPC9-211ENST00000521700 SDC3O75056 442 aa18.03■□□□□ 0.48
TRAPPC9-211ENST00000521700 DKK1O94907 266 aa18.03■□□□□ 0.48
TRAPPC9-211ENST00000521700 PRKCGP05129 697 aa18.03■□□□□ 0.48
TRAPPC9-211ENST00000521700 CR2P20023 1033 aa18.03■□□□□ 0.48
TRAPPC9-211ENST00000521700 KDELR1P24390 212 aa18.03■□□□□ 0.48
TRAPPC9-211ENST00000521700 ARHGAP25P42331 645 aa18.03■□□□□ 0.48
TRAPPC9-211ENST00000521700 ZNF75DP51815 510 aa18.03■□□□□ 0.48
TRAPPC9-211ENST00000521700 AP1S1P61966 158 aa18.03■□□□□ 0.48
TRAPPC9-211ENST00000521700 SEMG2Q02383 582 aa18.03■□□□□ 0.48
TRAPPC9-211ENST00000521700 ELP6Q0PNE2 266 aa18.03■□□□□ 0.48
TRAPPC9-211ENST00000521700 ZNF235Q14590 738 aa18.03■□□□□ 0.48
TRAPPC9-211ENST00000521700 PAFAH1B3Q15102 231 aaKnown RBP18.03■□□□□ 0.48
TRAPPC9-211ENST00000521700 CFAP58Q5T655 872 aa18.03■□□□□ 0.48
TRAPPC9-211ENST00000521700 NCBP2-AS2Q69YL0 99 aa18.03■□□□□ 0.48
TRAPPC9-211ENST00000521700 GAS2L3Q86XJ1 694 aa18.03■□□□□ 0.48
TRAPPC9-211ENST00000521700 MAP7D3Q8IWC1 876 aa18.03■□□□□ 0.48
TRAPPC9-211ENST00000521700 RHOT2Q8IXI1 618 aa18.03■□□□□ 0.48
TRAPPC9-211ENST00000521700 SLC25A45Q8N413 288 aa18.03■□□□□ 0.48
TRAPPC9-211ENST00000521700 DENND6BQ8NEG7 585 aa18.03■□□□□ 0.48
TRAPPC9-211ENST00000521700 RAPGEF5Q92565 580 aa18.03■□□□□ 0.48
TRAPPC9-211ENST00000521700 FAF2Q96CS3 445 aa18.03■□□□□ 0.48
TRAPPC9-211ENST00000521700 FTSJ1Q9UET6 329 aa18.03■□□□□ 0.48
TRAPPC9-211ENST00000521700 INTUQ9ULD6 942 aa18.03■□□□□ 0.48
TRAPPC9-211ENST00000521700 NEUROG3Q9Y4Z2 214 aa18.03■□□□□ 0.48
TRAPPC9-211ENST00000521700 TDRD6O60522 2096 aaKnown RBP18.03■□□□□ 0.48
TRAPPC9-211ENST00000521700 ARID1BQ8NFD5 2236 aaPredicted RBP18.03■□□□□ 0.48
TRAPPC9-211ENST00000521700 COL5A1P20908 1838 aaPredicted RBP18.02■□□□□ 0.48
TRAPPC9-211ENST00000521700 FAM221BA6H8Z2 402 aa18.02■□□□□ 0.48
TRAPPC9-211ENST00000521700 MFSD11O43934 449 aa18.02■□□□□ 0.48
TRAPPC9-211ENST00000521700 LDOC1O95751 146 aaPredicted RBP18.02■□□□□ 0.48
TRAPPC9-211ENST00000521700 HSPA9P38646 679 aaKnown RBP18.02■□□□□ 0.48
TRAPPC9-211ENST00000521700 RABIFP47224 123 aa18.02■□□□□ 0.48
TRAPPC9-211ENST00000521700 PFN3P60673 137 aa18.02■□□□□ 0.48
TRAPPC9-211ENST00000521700 GALNT2Q10471 571 aa18.02■□□□□ 0.48
TRAPPC9-211ENST00000521700 FZD2Q14332 565 aa18.02■□□□□ 0.48
TRAPPC9-211ENST00000521700 TCEAL1Q15170 157 aa18.02■□□□□ 0.48
TRAPPC9-211ENST00000521700 LRRK1Q38SD2 2015 aa18.02■□□□□ 0.48
TRAPPC9-211ENST00000521700 ZNF542PQ5EBM4 170 aa18.02■□□□□ 0.48
TRAPPC9-211ENST00000521700 MARC1Q5VT66 337 aa18.02■□□□□ 0.48
TRAPPC9-211ENST00000521700 ERAP2Q6P179 960 aa18.02■□□□□ 0.48
TRAPPC9-211ENST00000521700 LRRC49Q8IUZ0 686 aa18.02■□□□□ 0.48
TRAPPC9-211ENST00000521700 PQLC3Q8N755 202 aa18.02■□□□□ 0.48
TRAPPC9-211ENST00000521700 RFFLQ8WZ73 363 aa18.02■□□□□ 0.48
TRAPPC9-211ENST00000521700 IFT43Q96FT9 208 aa18.02■□□□□ 0.48
TRAPPC9-211ENST00000521700 NUDCD1Q96RS6 583 aa18.02■□□□□ 0.48
TRAPPC9-211ENST00000521700 MBNL1Q9NR56 388 aaKnown RBP18.02■□□□□ 0.48
TRAPPC9-211ENST00000521700 ATP8A1Q9Y2Q0 1164 aa18.02■□□□□ 0.48
TRAPPC9-211ENST00000521700 COQ6Q9Y2Z9 468 aa18.02■□□□□ 0.48
TRAPPC9-211ENST00000521700 CEP295Q9C0D2 2601 aa18.01■□□□□ 0.47
TRAPPC9-211ENST00000521700 SPTY2D1-AS1A0A0U1RR47 76 aa18.01■□□□□ 0.47
TRAPPC9-211ENST00000521700 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.01■□□□□ 0.47
TRAPPC9-211ENST00000521700 MAP3K6O95382 1288 aa18.01■□□□□ 0.47
TRAPPC9-211ENST00000521700 DGKAP23743 735 aa18.01■□□□□ 0.47
TRAPPC9-211ENST00000521700 IGFALSP35858 605 aa18.01■□□□□ 0.47
TRAPPC9-211ENST00000521700 MMP12P39900 470 aa18.01■□□□□ 0.47
TRAPPC9-211ENST00000521700 GARSP41250 739 aaKnown RBP18.01■□□□□ 0.47
TRAPPC9-211ENST00000521700 MAGEA1P43355 309 aa18.01■□□□□ 0.47
TRAPPC9-211ENST00000521700 MMP13P45452 471 aa18.01■□□□□ 0.47
TRAPPC9-211ENST00000521700 TPRG1LQ5T0D9 272 aa18.01■□□□□ 0.47
TRAPPC9-211ENST00000521700 ZFYVE27Q5T4F4 411 aa18.01■□□□□ 0.47
TRAPPC9-211ENST00000521700 BBS5Q8N3I7 341 aa18.01■□□□□ 0.47
TRAPPC9-211ENST00000521700 TEX26Q8N6G2 289 aa18.01■□□□□ 0.47
TRAPPC9-211ENST00000521700 TP53I13Q8NBR0 393 aaPredicted RBP18.01■□□□□ 0.47
TRAPPC9-211ENST00000521700 NSMCE1Q8WV22 266 aa18.01■□□□□ 0.47
TRAPPC9-211ENST00000521700 MRFAP1L1Q96HT8 127 aa18.01■□□□□ 0.47
TRAPPC9-211ENST00000521700 CNDP2Q96KP4 475 aaKnown RBP18.01■□□□□ 0.47
TRAPPC9-211ENST00000521700 RNF157Q96PX1 679 aa18.01■□□□□ 0.47
TRAPPC9-211ENST00000521700 MGME1Q9BQP7 344 aa18.01■□□□□ 0.47
TRAPPC9-211ENST00000521700 TMEM121BQ9BXQ6 578 aaPredicted RBP18.01■□□□□ 0.47
TRAPPC9-211ENST00000521700 NOD2Q9HC29 1040 aa18.01■□□□□ 0.47
TRAPPC9-211ENST00000521700 SCUBE2Q9NQ36 999 aa18.01■□□□□ 0.47
TRAPPC9-211ENST00000521700 UCKL1Q9NWZ5 548 aa18.01■□□□□ 0.47
TRAPPC9-211ENST00000521700 MSRB2Q9Y3D2 182 aa18.01■□□□□ 0.47
TRAPPC9-211ENST00000521700 PCDHGC4Q9Y5F7 938 aa18.01■□□□□ 0.47
TRAPPC9-211ENST00000521700 EPG5Q9HCE0 2579 aa18.01■□□□□ 0.47
TRAPPC9-211ENST00000521700 ENC1O14682 589 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms