RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 PCDHGB2Q9Y5G2 931 aa20.84■□□□□ 0.93
TRIM35-203ENST00000521253 DOCK9Q9BZ29 2069 aa20.83■□□□□ 0.93
TRIM35-203ENST00000521253 A0A1B0GTQ1 180 aa20.83■□□□□ 0.93
TRIM35-203ENST00000521253 TRAFD1O14545 582 aaPredicted RBP20.83■□□□□ 0.93
TRIM35-203ENST00000521253 RAD51BO15315 384 aa20.83■□□□□ 0.93
TRIM35-203ENST00000521253 PSTPIP1O43586 416 aa20.83■□□□□ 0.93
TRIM35-203ENST00000521253 DFNA5O60443 496 aa20.83■□□□□ 0.93
TRIM35-203ENST00000521253 MAGEC1O60732 1142 aa20.83■□□□□ 0.93
TRIM35-203ENST00000521253 MMP20O60882 483 aa20.83■□□□□ 0.93
TRIM35-203ENST00000521253 MX2P20592 715 aa20.83■□□□□ 0.93
TRIM35-203ENST00000521253 MAXP61244 160 aa20.83■□□□□ 0.93
TRIM35-203ENST00000521253 IL9RQ01113 521 aa20.83■□□□□ 0.93
TRIM35-203ENST00000521253 SGCGQ13326 291 aa20.83■□□□□ 0.93
TRIM35-203ENST00000521253 HNRNPDQ14103 355 aaKnown RBP20.83■□□□□ 0.93
TRIM35-203ENST00000521253 IFI16Q16666 785 aaKnown RBP20.83■□□□□ 0.93
TRIM35-203ENST00000521253 ODF2Q5BJF6 829 aa20.83■□□□□ 0.93
TRIM35-203ENST00000521253 N4BP2L1Q5TBK1 243 aaPredicted RBP20.83■□□□□ 0.93
TRIM35-203ENST00000521253 SLC9A4Q6AI14 798 aa20.83■□□□□ 0.93
TRIM35-203ENST00000521253 C11orf63Q6NUN7 778 aa20.83■□□□□ 0.93
TRIM35-203ENST00000521253 TPCN2Q8NHX9 752 aa20.83■□□□□ 0.93
TRIM35-203ENST00000521253 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.83■□□□□ 0.93
TRIM35-203ENST00000521253 CXorf40AQ8TE69 158 aa20.83■□□□□ 0.93
TRIM35-203ENST00000521253 KLHDC7BQ96G42 594 aa20.83■□□□□ 0.93
TRIM35-203ENST00000521253 TSGA13Q96PP4 275 aa20.83■□□□□ 0.93
TRIM35-203ENST00000521253 NUDCD1Q96RS6 583 aa20.83■□□□□ 0.93
TRIM35-203ENST00000521253 WRAP53Q9BUR4 548 aaKnown RBP20.83■□□□□ 0.93
TRIM35-203ENST00000521253 MAK16Q9BXY0 300 aaKnown RBP20.83■□□□□ 0.93
TRIM35-203ENST00000521253 LACRTQ9GZZ8 138 aa20.83■□□□□ 0.93
TRIM35-203ENST00000521253 NOD2Q9HC29 1040 aa20.83■□□□□ 0.93
TRIM35-203ENST00000521253 DUSP10Q9Y6W6 482 aa20.83■□□□□ 0.93
TRIM35-203ENST00000521253 CABIN1Q9Y6J0 2220 aa20.82■□□□□ 0.92
TRIM35-203ENST00000521253 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.82■□□□□ 0.92
TRIM35-203ENST00000521253 APOL1O14791 398 aa20.82■□□□□ 0.92
TRIM35-203ENST00000521253 MATN3O15232 486 aa20.82■□□□□ 0.92
TRIM35-203ENST00000521253 PRKCGP05129 697 aa20.82■□□□□ 0.92
TRIM35-203ENST00000521253 THEGLP0DJG4 465 aa20.82■□□□□ 0.92
TRIM35-203ENST00000521253 CCNCP24863 283 aa20.82■□□□□ 0.92
TRIM35-203ENST00000521253 ELP6Q0PNE2 266 aa20.82■□□□□ 0.92
TRIM35-203ENST00000521253 TMEM52BQ4KMG9 183 aa20.82■□□□□ 0.92
TRIM35-203ENST00000521253 TIGD7Q6NT04 549 aaPredicted RBP20.82■□□□□ 0.92
TRIM35-203ENST00000521253 MFSD7Q6UXD7 560 aa20.82■□□□□ 0.92
TRIM35-203ENST00000521253 DBX2Q6ZNG2 339 aa20.82■□□□□ 0.92
TRIM35-203ENST00000521253 ABI3BPQ7Z7G0 1075 aa20.82■□□□□ 0.92
TRIM35-203ENST00000521253 ASB12Q8WXK4 309 aa20.82■□□□□ 0.92
TRIM35-203ENST00000521253 MAML1Q92585 1016 aa20.82■□□□□ 0.92
TRIM35-203ENST00000521253 FATE1Q969F0 183 aa20.82■□□□□ 0.92
TRIM35-203ENST00000521253 KLF6Q99612 283 aaPredicted RBP20.82■□□□□ 0.92
TRIM35-203ENST00000521253 ERVMER34-1Q9H9K5 563 aa20.82■□□□□ 0.92
TRIM35-203ENST00000521253 NT5MQ9NPB1 228 aa20.82■□□□□ 0.92
TRIM35-203ENST00000521253 SCUBE2Q9NQ36 999 aa20.82■□□□□ 0.92
TRIM35-203ENST00000521253 ATP8A1Q9Y2Q0 1164 aa20.82■□□□□ 0.92
TRIM35-203ENST00000521253 HS3ST3A1Q9Y663 406 aa20.82■□□□□ 0.92
TRIM35-203ENST00000521253 RIOK3O14730 519 aaKnown RBP20.81■□□□□ 0.92
TRIM35-203ENST00000521253 PCDHGA12O60330 932 aa20.81■□□□□ 0.92
TRIM35-203ENST00000521253 ADRB1P08588 477 aa20.81■□□□□ 0.92
TRIM35-203ENST00000521253 VAV2P52735 878 aa20.81■□□□□ 0.92
TRIM35-203ENST00000521253 FAM193AP78312 1265 aa20.81■□□□□ 0.92
TRIM35-203ENST00000521253 SEMG2Q02383 582 aa20.81■□□□□ 0.92
TRIM35-203ENST00000521253 SUZ12Q15022 739 aaKnown RBP20.81■□□□□ 0.92
TRIM35-203ENST00000521253 SHBQ15464 509 aa20.81■□□□□ 0.92
TRIM35-203ENST00000521253 ERAP2Q6P179 960 aa20.81■□□□□ 0.92
TRIM35-203ENST00000521253 DAAM2Q86T65 1068 aa20.81■□□□□ 0.92
TRIM35-203ENST00000521253 RFX6Q8HWS3 928 aa20.81■□□□□ 0.92
TRIM35-203ENST00000521253 PAF1Q8N7H5 531 aa20.81■□□□□ 0.92
TRIM35-203ENST00000521253 OR13H1Q8NG92 308 aa20.81■□□□□ 0.92
TRIM35-203ENST00000521253 SETD7Q8WTS6 366 aaKnown RBP20.81■□□□□ 0.92
TRIM35-203ENST00000521253 HDAC11Q96DB2 347 aa20.81■□□□□ 0.92
TRIM35-203ENST00000521253 BMFQ96LC9 184 aa20.81■□□□□ 0.92
TRIM35-203ENST00000521253 ZNF830Q96NB3 372 aaPredicted RBP20.81■□□□□ 0.92
TRIM35-203ENST00000521253 LENG8Q96PV6 779 aaPredicted RBP20.81■□□□□ 0.92
TRIM35-203ENST00000521253 PCDHGC4Q9Y5F7 938 aa20.81■□□□□ 0.92
TRIM35-203ENST00000521253 HEY1Q9Y5J3 304 aa20.81■□□□□ 0.92
TRIM35-203ENST00000521253 TRPM6Q9BX84 2022 aa20.81■□□□□ 0.92
TRIM35-203ENST00000521253 SPAARA0A1B0GVQ0 90 aa20.8■□□□□ 0.92
TRIM35-203ENST00000521253 POM121BA6NF01 834 aa20.8■□□□□ 0.92
TRIM35-203ENST00000521253 A6NNZ2 444 aa20.8■□□□□ 0.92
TRIM35-203ENST00000521253 BTNL10A8MVZ5 291 aa20.8■□□□□ 0.92
TRIM35-203ENST00000521253 FLRT2O43155 660 aa20.8■□□□□ 0.92
TRIM35-203ENST00000521253 PJA2O43164 708 aa20.8■□□□□ 0.92
TRIM35-203ENST00000521253 HTRA2O43464 458 aaPredicted RBP20.8■□□□□ 0.92
TRIM35-203ENST00000521253 TM7SF2O76062 418 aa20.8■□□□□ 0.92
TRIM35-203ENST00000521253 ZFXP17010 805 aaPredicted RBP20.8■□□□□ 0.92
TRIM35-203ENST00000521253 MMP12P39900 470 aa20.8■□□□□ 0.92
TRIM35-203ENST00000521253 CDKN2BP42772 138 aa20.8■□□□□ 0.92
TRIM35-203ENST00000521253 MARCKSL1P49006 195 aa20.8■□□□□ 0.92
TRIM35-203ENST00000521253 ARRB1P49407 418 aaPredicted RBP20.8■□□□□ 0.92
TRIM35-203ENST00000521253 DYNLT1P63172 113 aa20.8■□□□□ 0.92
TRIM35-203ENST00000521253 TAZQ16635 292 aa20.8■□□□□ 0.92
TRIM35-203ENST00000521253 RALGPS1Q5JS13 557 aa20.8■□□□□ 0.92
TRIM35-203ENST00000521253 NPNTQ6UXI9 565 aa20.8■□□□□ 0.92
TRIM35-203ENST00000521253 Q6ZSR6 202 aa20.8■□□□□ 0.92
TRIM35-203ENST00000521253 SLC22A18ASQ8N1D0 253 aa20.8■□□□□ 0.92
TRIM35-203ENST00000521253 CCNYQ8ND76 341 aa20.8■□□□□ 0.92
TRIM35-203ENST00000521253 LGMNQ99538 433 aa20.8■□□□□ 0.92
TRIM35-203ENST00000521253 DESI2Q9BSY9 194 aa20.8■□□□□ 0.92
TRIM35-203ENST00000521253 RBM22Q9NW64 420 aaKnown RBP eCLIP20.8■□□□□ 0.92
TRIM35-203ENST00000521253 PCOLCE2Q9UKZ9 415 aa20.8■□□□□ 0.92
TRIM35-203ENST00000521253 GOLGA6L6A8MZA4 724 aa20.79■□□□□ 0.92
TRIM35-203ENST00000521253 FPGTO14772 594 aa20.79■□□□□ 0.92
TRIM35-203ENST00000521253 CBFA2T3O75081 653 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms