RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 TCRBV7S3A2A0A539 114 aa15.46■□□□□ 0.07
LSM1-203ENST00000520755 RNASEH2AO75792 299 aaKnown RBP15.46■□□□□ 0.07
LSM1-203ENST00000520755 RPP40O75818 363 aaKnown RBP15.46■□□□□ 0.07
LSM1-203ENST00000520755 HEXIM1O94992 359 aaKnown RBP15.46■□□□□ 0.07
LSM1-203ENST00000520755 PIGNO95427 931 aa15.46■□□□□ 0.07
LSM1-203ENST00000520755 UGT2B4P06133 528 aa15.46■□□□□ 0.07
LSM1-203ENST00000520755 P2RY2P41231 377 aa15.46■□□□□ 0.07
LSM1-203ENST00000520755 RPL21P46778 160 aaKnown RBP15.46■□□□□ 0.07
LSM1-203ENST00000520755 AP1S1P61966 158 aa15.46■□□□□ 0.07
LSM1-203ENST00000520755 TRAF2Q12933 501 aa15.46■□□□□ 0.07
LSM1-203ENST00000520755 OLIG2Q13516 323 aa15.46■□□□□ 0.07
LSM1-203ENST00000520755 KCNJ11Q14654 390 aa15.46■□□□□ 0.07
LSM1-203ENST00000520755 TRADDQ15628 312 aa15.46■□□□□ 0.07
LSM1-203ENST00000520755 PARP6Q2NL67 630 aa15.46■□□□□ 0.07
LSM1-203ENST00000520755 MAP7D1Q3KQU3 841 aa15.46■□□□□ 0.07
LSM1-203ENST00000520755 ANKRD22Q5VYY1 191 aa15.46■□□□□ 0.07
LSM1-203ENST00000520755 DUPD1Q68J44 220 aa15.46■□□□□ 0.07
LSM1-203ENST00000520755 KCTD11Q693B1 232 aa15.46■□□□□ 0.07
LSM1-203ENST00000520755 ZC3H14Q6PJT7 736 aaKnown RBP15.46■□□□□ 0.07
LSM1-203ENST00000520755 HDDC3Q8N4P3 179 aa15.46■□□□□ 0.07
LSM1-203ENST00000520755 GAB3Q8WWW8 586 aa15.46■□□□□ 0.07
LSM1-203ENST00000520755 SEC14L1Q92503 715 aa15.46■□□□□ 0.07
LSM1-203ENST00000520755 ARRDC3Q96B67 414 aa15.46■□□□□ 0.07
LSM1-203ENST00000520755 HINFPQ9BQA5 517 aa15.46■□□□□ 0.07
LSM1-203ENST00000520755 ERP44Q9BS26 406 aa15.46■□□□□ 0.07
LSM1-203ENST00000520755 TRIM31Q9BZY9 425 aa15.46■□□□□ 0.07
LSM1-203ENST00000520755 SCUBE2Q9NQ36 999 aa15.46■□□□□ 0.07
LSM1-203ENST00000520755 DYRK4Q9NR20 520 aa15.46■□□□□ 0.07
LSM1-203ENST00000520755 RAB6BQ9NRW1 208 aa15.46■□□□□ 0.07
LSM1-203ENST00000520755 FAM86C1Q9NVL1 165 aa15.46■□□□□ 0.07
LSM1-203ENST00000520755 HAUS2Q9NVX0 235 aa15.46■□□□□ 0.07
LSM1-203ENST00000520755 GRHL1Q9NZI5 618 aa15.46■□□□□ 0.07
LSM1-203ENST00000520755 UBP1Q9NZI7 540 aa15.46■□□□□ 0.07
LSM1-203ENST00000520755 SERGEFQ9UGK8 458 aa15.46■□□□□ 0.07
LSM1-203ENST00000520755 RAPGEFL1Q9UHV5 662 aa15.46■□□□□ 0.07
LSM1-203ENST00000520755 NCKAP1Q9Y2A7 1128 aa15.46■□□□□ 0.07
LSM1-203ENST00000520755 IGHV1OR15-9A0A0B4J2B8 117 aa15.45■□□□□ 0.06
LSM1-203ENST00000520755 ESYT3A0FGR9 886 aa15.45■□□□□ 0.06
LSM1-203ENST00000520755 EFCAB8A8MWE9 144 aa15.45■□□□□ 0.06
LSM1-203ENST00000520755 DNALI1O14645 258 aaPredicted RBP15.45■□□□□ 0.06
LSM1-203ENST00000520755 HRO43593 1189 aa15.45■□□□□ 0.06
LSM1-203ENST00000520755 TMEM63AO94886 807 aa15.45■□□□□ 0.06
LSM1-203ENST00000520755 C7P10643 843 aa15.45■□□□□ 0.06
LSM1-203ENST00000520755 FDFT1P37268 417 aa15.45■□□□□ 0.06
LSM1-203ENST00000520755 MAGEA6P43360 314 aa15.45■□□□□ 0.06
LSM1-203ENST00000520755 TERF1P54274 439 aa15.45■□□□□ 0.06
LSM1-203ENST00000520755 BASP1P80723 227 aaKnown RBP15.45■□□□□ 0.06
LSM1-203ENST00000520755 CNTN1Q12860 1018 aa15.45■□□□□ 0.06
LSM1-203ENST00000520755 SFSWAPQ12872 951 aaKnown RBP15.45■□□□□ 0.06
LSM1-203ENST00000520755 NUMA1Q14980 2115 aa15.45■□□□□ 0.06
LSM1-203ENST00000520755 SLC14A2Q15849 920 aa15.45■□□□□ 0.06
LSM1-203ENST00000520755 RALGPS1Q5JS13 557 aa15.45■□□□□ 0.06
LSM1-203ENST00000520755 SYCP2LQ5T4T6 812 aa15.45■□□□□ 0.06
LSM1-203ENST00000520755 RNASEH2BQ5TBB1 312 aaKnown RBP15.45■□□□□ 0.06
LSM1-203ENST00000520755 GDPD4Q6W3E5 623 aa15.45■□□□□ 0.06
LSM1-203ENST00000520755 CEP68Q76N32 757 aa15.45■□□□□ 0.06
LSM1-203ENST00000520755 PAF1Q8N7H5 531 aa15.45■□□□□ 0.06
LSM1-203ENST00000520755 CPT1BQ92523 772 aa15.45■□□□□ 0.06
LSM1-203ENST00000520755 PPP1R16AQ96I34 528 aa15.45■□□□□ 0.06
LSM1-203ENST00000520755 LRIG1Q96JA1 1093 aa15.45■□□□□ 0.06
LSM1-203ENST00000520755 KLHL32Q96NJ5 620 aa15.45■□□□□ 0.06
LSM1-203ENST00000520755 OSBPL1AQ9BXW6 950 aa15.45■□□□□ 0.06
LSM1-203ENST00000520755 IRF2BPLQ9H1B7 796 aa15.45■□□□□ 0.06
LSM1-203ENST00000520755 EPC1Q9H2F5 836 aa15.45■□□□□ 0.06
LSM1-203ENST00000520755 DPH5Q9H2P9 285 aa15.45■□□□□ 0.06
LSM1-203ENST00000520755 PLXNA2O75051 1894 aa15.45■□□□□ 0.06
LSM1-203ENST00000520755 SPAG17Q6Q759 2223 aa15.44■□□□□ 0.06
LSM1-203ENST00000520755 TRAFD1O14545 582 aaPredicted RBP15.44■□□□□ 0.06
LSM1-203ENST00000520755 MAP3K13O43283 966 aa15.44■□□□□ 0.06
LSM1-203ENST00000520755 LILRB5O75023 590 aa15.44■□□□□ 0.06
LSM1-203ENST00000520755 SEC31AO94979 1220 aaKnown RBP15.44■□□□□ 0.06
LSM1-203ENST00000520755 RHOXF2BP0C7M4 288 aa15.44■□□□□ 0.06
LSM1-203ENST00000520755 BCKDHBP21953 392 aa15.44■□□□□ 0.06
LSM1-203ENST00000520755 CD6P30203 668 aa15.44■□□□□ 0.06
LSM1-203ENST00000520755 OXTRP30559 389 aa15.44■□□□□ 0.06
LSM1-203ENST00000520755 CNR2P34972 360 aa15.44■□□□□ 0.06
LSM1-203ENST00000520755 ADRA1AP35348 466 aa15.44■□□□□ 0.06
LSM1-203ENST00000520755 DRD3P35462 400 aa15.44■□□□□ 0.06
LSM1-203ENST00000520755 ACTN2P35609 894 aa15.44■□□□□ 0.06
LSM1-203ENST00000520755 MAPK8P45983 427 aa15.44■□□□□ 0.06
LSM1-203ENST00000520755 BCL2L1Q07817 233 aa15.44■□□□□ 0.06
LSM1-203ENST00000520755 GRM3Q14832 879 aa15.44■□□□□ 0.06
LSM1-203ENST00000520755 GLE1Q53GS7 698 aaKnown RBP15.44■□□□□ 0.06
LSM1-203ENST00000520755 ZNF805Q5CZA5 627 aa15.44■□□□□ 0.06
LSM1-203ENST00000520755 IZUMO3Q5VZ72 239 aa15.44■□□□□ 0.06
LSM1-203ENST00000520755 C4orf22Q6V702 233 aa15.44■□□□□ 0.06
LSM1-203ENST00000520755 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.44■□□□□ 0.06
LSM1-203ENST00000520755 PRR23BQ6ZRT6 265 aa15.44■□□□□ 0.06
LSM1-203ENST00000520755 USP30Q70CQ3 517 aa15.44■□□□□ 0.06
LSM1-203ENST00000520755 ZNF534Q76KX8 674 aa15.44■□□□□ 0.06
LSM1-203ENST00000520755 KBTBD6Q86V97 674 aa15.44■□□□□ 0.06
LSM1-203ENST00000520755 ZSWIM9Q86XI8 627 aa15.44■□□□□ 0.06
LSM1-203ENST00000520755 CAMK1DQ8IU85 385 aa15.44■□□□□ 0.06
LSM1-203ENST00000520755 PDCD7Q8N8D1 485 aaKnown RBP15.44■□□□□ 0.06
LSM1-203ENST00000520755 CCHCR1Q8TD31 782 aa15.44■□□□□ 0.06
LSM1-203ENST00000520755 TOE1Q96GM8 510 aaKnown RBP15.44■□□□□ 0.06
LSM1-203ENST00000520755 MRGPRX2Q96LB1 330 aa15.44■□□□□ 0.06
LSM1-203ENST00000520755 TUBGCP5Q96RT8 1024 aa15.44■□□□□ 0.06
LSM1-203ENST00000520755 TRIB3Q96RU7 358 aa15.44■□□□□ 0.06
LSM1-203ENST00000520755 RHOXF2Q9BQY4 288 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms