RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 DAB2IPQ5VWQ8 1189 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 TMEM81Q6P7N7 255 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 INO80CQ6PI98 192 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 TECPR1Q7Z6L1 1165 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 TADA2BQ86TJ2 420 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 FAM160B2Q86V87 743 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 PALB2Q86YC2 1186 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 DENND6AQ8IWF6 608 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 PCYOX1LQ8NBM8 494 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 RASSF8Q8NHQ8 419 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 NFKBIDQ8NI38 313 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 NSMCE1Q8WV22 266 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 TMEM18Q96B42 140 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 RRP36Q96EU6 259 aaKnown RBP3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 SLC26A6Q9BXS9 759 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 AGXT2Q9BYV1 514 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 RBM38Q9H0Z9 239 aaKnown RBP3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 CDT1Q9H211 546 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 SNTG1Q9NSN8 517 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 HIF1ANQ9NWT6 349 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 NCKIPSDQ9NZQ3 722 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 KCND2Q9NZV8 630 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 KIAA1456Q9P272 454 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 IL36RNQ9UBH0 155 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 LAS1LQ9Y4W2 734 aaKnown RBP3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 SRPRBQ9Y5M8 271 aaKnown RBP3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 RAI2Q9Y5P3 530 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 INSRP06213 1382 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 LRPPRCP42704 1394 aaKnown RBP3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 DHX29Q7Z478 1369 aaKnown RBP3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 PZPP20742 1482 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 ABCC10Q5T3U5 1492 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 TEX14Q8IWB6 1497 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 NLRP1Q9C000 1473 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 MBD5Q9P267 1494 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 SHANK2Q9UPX8 1470 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 ADGRF5Q8IZF2 1346 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 KDM6BO15054 1643 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 KIAA0556O60303 1618 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 TYW5A2RUC4 315 aaKnown RBP3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 CBY3A6NI87 242 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 CD8B2A6NJW9 211 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 TTC36A6NLP5 189 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 J3KRW8 73 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 VWA5AO00534 786 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 SPRY3O43610 288 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 F9P00740 461 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 TSPY4P0CV99 314 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 TSPY10P0CW01 314 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 IRF1P10914 325 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 HOXB2P14652 356 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 SLC2A4P14672 509 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 MYF6P23409 242 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 PAX3P23760 479 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 ABCD3P28288 659 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 FMO4P31512 558 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 DCTDP32321 178 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 KRT9P35527 623 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 GGT5P36269 586 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 GABRB2P47870 512 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 RFX2P48378 723 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 ROR2Q01974 943 aaKnown RBP3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 FAM27E3Q08E93 113 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 ST3GAL1Q11201 340 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 TDGQ13569 410 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 LPIN1Q14693 890 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 RALBP1Q15311 655 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 TAF11Q15544 211 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 DNTTIP2Q5QJE6 756 aaKnown RBP3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 FAM69AQ5T7M9 428 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 AWAT2Q6E213 333 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 TBC1D26Q86UD7 250 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 CADM3Q8N126 398 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 PLD5Q8N7P1 536 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 TEX19Q8NA77 164 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 RFFLQ8WZ73 363 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 KIF1BPQ96EK5 621 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 SAAL1Q96ER3 474 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 SF3B5Q9BWJ5 86 aaKnown RBP3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 POLDIP3Q9BY77 421 aaKnown RBP3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 PDCL3Q9H2J4 239 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 MVB12BQ9H7P6 319 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 PLAC1Q9HBJ0 212 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 ANKRD10Q9NXR5 420 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 PLK2Q9NYY3 685 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 NUDCQ9Y266 331 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 CARD8Q9Y2G2 431 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 PBRM1Q86U86 1689 aa3.45□□□□□ -1.86
HMGB1P41-201ENST00000520234 PRG4Q92954 1404 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 ANKRD50Q9ULJ7 1429 aa3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 CDK13Q14004 1512 aaKnown RBP3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 KDM5DQ9BY66 1539 aa3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 RAPGEF6Q8TEU7 1601 aa3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 ATP10BO94823 1461 aa3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 TEX13CA0A0J9YWL9 993 aa3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 CHL1O00533 1208 aa3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 EPB41L2O43491 1005 aaKnown RBP3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 SLC25A17O43808 307 aa3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 FRAT2O75474 233 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P41-201ENST00000520234 HEXAP06865 529 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms