RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 CCDC170Q8IYT3 715 aa13.43□□□□□ -0.26
VEGFA-219ENST00000518824 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.43□□□□□ -0.26
VEGFA-219ENST00000518824 BAHD1Q8TBE0 780 aaPredicted RBP13.43□□□□□ -0.26
VEGFA-219ENST00000518824 RAB7BQ96AH8 199 aa13.43□□□□□ -0.26
VEGFA-219ENST00000518824 ECHDC3Q96DC8 303 aa13.43□□□□□ -0.26
VEGFA-219ENST00000518824 KLHDC7BQ96G42 594 aa13.43□□□□□ -0.26
VEGFA-219ENST00000518824 ZNF599Q96NL3 588 aa13.43□□□□□ -0.26
VEGFA-219ENST00000518824 MGME1Q9BQP7 344 aa13.43□□□□□ -0.26
VEGFA-219ENST00000518824 LACRTQ9GZZ8 138 aa13.43□□□□□ -0.26
VEGFA-219ENST00000518824 NOD2Q9HC29 1040 aa13.43□□□□□ -0.26
VEGFA-219ENST00000518824 NT5MQ9NPB1 228 aa13.43□□□□□ -0.26
VEGFA-219ENST00000518824 GDF3Q9NR23 364 aa13.43□□□□□ -0.26
VEGFA-219ENST00000518824 MBNL1Q9NR56 388 aaKnown RBP13.43□□□□□ -0.26
VEGFA-219ENST00000518824 DTLQ9NZJ0 730 aa13.43□□□□□ -0.26
VEGFA-219ENST00000518824 PCDHGC4Q9Y5F7 938 aa13.43□□□□□ -0.26
VEGFA-219ENST00000518824 ALG6Q9Y672 507 aa13.43□□□□□ -0.26
VEGFA-219ENST00000518824 A0A0U1RQS6 177 aa13.42□□□□□ -0.26
VEGFA-219ENST00000518824 GOLGA8CPA6NN73 597 aa13.42□□□□□ -0.26
VEGFA-219ENST00000518824 A8MX80 341 aa13.42□□□□□ -0.26
VEGFA-219ENST00000518824 RIOK3O14730 519 aaKnown RBP13.42□□□□□ -0.26
VEGFA-219ENST00000518824 GM2AP17900 193 aa13.42□□□□□ -0.26
VEGFA-219ENST00000518824 AKT2P31751 481 aa13.42□□□□□ -0.26
VEGFA-219ENST00000518824 IGFALSP35858 605 aa13.42□□□□□ -0.26
VEGFA-219ENST00000518824 MMP13P45452 471 aa13.42□□□□□ -0.26
VEGFA-219ENST00000518824 CCT8P50990 548 aa13.42□□□□□ -0.26
VEGFA-219ENST00000518824 HADHBP55084 474 aaKnown RBP13.42□□□□□ -0.26
VEGFA-219ENST00000518824 ADCY2Q08462 1091 aa13.42□□□□□ -0.26
VEGFA-219ENST00000518824 NSUN2Q08J23 767 aaKnown RBP eCLIP13.42□□□□□ -0.26
VEGFA-219ENST00000518824 TRAF2Q12933 501 aa13.42□□□□□ -0.26
VEGFA-219ENST00000518824 FOXC1Q12948 553 aa13.42□□□□□ -0.26
VEGFA-219ENST00000518824 ZNF235Q14590 738 aa13.42□□□□□ -0.26
VEGFA-219ENST00000518824 TRIP6Q15654 476 aaKnown RBP13.42□□□□□ -0.26
VEGFA-219ENST00000518824 TMEM52BQ4KMG9 183 aa13.42□□□□□ -0.26
VEGFA-219ENST00000518824 Q6ZSR6 202 aa13.42□□□□□ -0.26
VEGFA-219ENST00000518824 ABI3BPQ7Z7G0 1075 aa13.42□□□□□ -0.26
VEGFA-219ENST00000518824 SLCO6A1Q86UG4 719 aa13.42□□□□□ -0.26
VEGFA-219ENST00000518824 TEX26Q8N6G2 289 aa13.42□□□□□ -0.26
VEGFA-219ENST00000518824 PNPLA1Q8N8W4 532 aa13.42□□□□□ -0.26
VEGFA-219ENST00000518824 TP53I13Q8NBR0 393 aaPredicted RBP13.42□□□□□ -0.26
VEGFA-219ENST00000518824 RHBDD1Q8TEB9 315 aa13.42□□□□□ -0.26
VEGFA-219ENST00000518824 SAP25Q8TEE9 199 aa13.42□□□□□ -0.26
VEGFA-219ENST00000518824 MAML1Q92585 1016 aa13.42□□□□□ -0.26
VEGFA-219ENST00000518824 FUBP1Q96AE4 644 aaKnown RBP13.42□□□□□ -0.26
VEGFA-219ENST00000518824 ZNF641Q96N77 438 aaPredicted RBP13.42□□□□□ -0.26
VEGFA-219ENST00000518824 TUBGCP5Q96RT8 1024 aa13.42□□□□□ -0.26
VEGFA-219ENST00000518824 LGMNQ99538 433 aa13.42□□□□□ -0.26
VEGFA-219ENST00000518824 SLC32A1Q9H598 525 aa13.42□□□□□ -0.26
VEGFA-219ENST00000518824 TOR4AQ9NXH8 423 aa13.42□□□□□ -0.26
VEGFA-219ENST00000518824 TRIM10Q9UDY6 481 aa13.42□□□□□ -0.26
VEGFA-219ENST00000518824 PNMA8BQ9ULN7 279 aaPredicted RBP13.42□□□□□ -0.26
VEGFA-219ENST00000518824 TPX2Q9ULW0 747 aaKnown RBP13.42□□□□□ -0.26
VEGFA-219ENST00000518824 WASF3Q9UPY6 502 aa13.42□□□□□ -0.26
VEGFA-219ENST00000518824 ARID1BQ8NFD5 2236 aaPredicted RBP13.41□□□□□ -0.26
VEGFA-219ENST00000518824 SPOPO43791 374 aa13.41□□□□□ -0.26
VEGFA-219ENST00000518824 PCDHGA12O60330 932 aa13.41□□□□□ -0.26
VEGFA-219ENST00000518824 HLA-DQB2P05538 268 aa13.41□□□□□ -0.26
VEGFA-219ENST00000518824 KRT10P13645 584 aa13.41□□□□□ -0.26
VEGFA-219ENST00000518824 EPHA8P29322 1005 aaPredicted RBP13.41□□□□□ -0.26
VEGFA-219ENST00000518824 CYLC1P35663 651 aaPredicted RBP13.41□□□□□ -0.26
VEGFA-219ENST00000518824 NUDT1P36639 197 aa13.41□□□□□ -0.26
VEGFA-219ENST00000518824 MMP12P39900 470 aa13.41□□□□□ -0.26
VEGFA-219ENST00000518824 DYNLT1P63172 113 aa13.41□□□□□ -0.26
VEGFA-219ENST00000518824 FOXK2Q01167 660 aa13.41□□□□□ -0.26
VEGFA-219ENST00000518824 DSC2Q02487 901 aa13.41□□□□□ -0.26
VEGFA-219ENST00000518824 BCL2L1Q07817 233 aa13.41□□□□□ -0.26
VEGFA-219ENST00000518824 SPA17Q15506 151 aa13.41□□□□□ -0.26
VEGFA-219ENST00000518824 SLC45A4Q5BKX6 768 aa13.41□□□□□ -0.26
VEGFA-219ENST00000518824 MARC1Q5VT66 337 aa13.41□□□□□ -0.26
VEGFA-219ENST00000518824 SLC9A4Q6AI14 798 aa13.41□□□□□ -0.26
VEGFA-219ENST00000518824 PTAR1Q7Z6K3 402 aaPredicted RBP13.41□□□□□ -0.26
VEGFA-219ENST00000518824 IQCHQ86VS3 1027 aa13.41□□□□□ -0.26
VEGFA-219ENST00000518824 TMTC1Q8IUR5 882 aa13.41□□□□□ -0.26
VEGFA-219ENST00000518824 MAP7D3Q8IWC1 876 aa13.41□□□□□ -0.26
VEGFA-219ENST00000518824 TPCN2Q8NHX9 752 aa13.41□□□□□ -0.26
VEGFA-219ENST00000518824 KRT35Q92764 455 aa13.41□□□□□ -0.26
VEGFA-219ENST00000518824 CENPTQ96BT3 561 aa13.41□□□□□ -0.26
VEGFA-219ENST00000518824 NUDCD1Q96RS6 583 aa13.41□□□□□ -0.26
VEGFA-219ENST00000518824 DESI2Q9BSY9 194 aa13.41□□□□□ -0.26
VEGFA-219ENST00000518824 CEP41Q9BYV8 373 aa13.41□□□□□ -0.26
VEGFA-219ENST00000518824 ATP13A3Q9H7F0 1226 aa13.41□□□□□ -0.26
VEGFA-219ENST00000518824 SCUBE2Q9NQ36 999 aa13.41□□□□□ -0.26
VEGFA-219ENST00000518824 GPR27Q9NS67 375 aa13.41□□□□□ -0.26
VEGFA-219ENST00000518824 UCKL1Q9NWZ5 548 aa13.41□□□□□ -0.26
VEGFA-219ENST00000518824 SAE1Q9UBE0 346 aaPredicted RBP13.41□□□□□ -0.26
VEGFA-219ENST00000518824 LCMT1Q9UIC8 334 aa13.41□□□□□ -0.26
VEGFA-219ENST00000518824 KLF15Q9UIH9 416 aa13.41□□□□□ -0.26
VEGFA-219ENST00000518824 ATP8A1Q9Y2Q0 1164 aa13.41□□□□□ -0.26
VEGFA-219ENST00000518824 PCDHGB2Q9Y5G2 931 aa13.41□□□□□ -0.26
VEGFA-219ENST00000518824 HEY1Q9Y5J3 304 aa13.41□□□□□ -0.26
VEGFA-219ENST00000518824 HS3ST3A1Q9Y663 406 aa13.41□□□□□ -0.26
VEGFA-219ENST00000518824 KCNK1O00180 336 aa13.4□□□□□ -0.26
VEGFA-219ENST00000518824 MATN3O15232 486 aa13.4□□□□□ -0.26
VEGFA-219ENST00000518824 FLRT2O43155 660 aa13.4□□□□□ -0.26
VEGFA-219ENST00000518824 HTRA2O43464 458 aaPredicted RBP13.4□□□□□ -0.26
VEGFA-219ENST00000518824 TM7SF2O76062 418 aa13.4□□□□□ -0.26
VEGFA-219ENST00000518824 PDHA1P08559 390 aa13.4□□□□□ -0.26
VEGFA-219ENST00000518824 ATXN1LP0C7T5 689 aaKnown RBP13.4□□□□□ -0.26
VEGFA-219ENST00000518824 C6P13671 934 aa13.4□□□□□ -0.26
VEGFA-219ENST00000518824 XPAP23025 273 aaPredicted RBP13.4□□□□□ -0.26
VEGFA-219ENST00000518824 SERPINA4P29622 427 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms