RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 SOCS5O75159 536 aa22.19■■□□□ 1.14
VEGFA-217ENST00000518538 PTMAP06454 111 aaKnown RBP22.19■■□□□ 1.14
VEGFA-217ENST00000518538 SYPP08247 313 aa22.19■■□□□ 1.14
VEGFA-217ENST00000518538 PYGMP11217 842 aa22.19■■□□□ 1.14
VEGFA-217ENST00000518538 ENGP17813 658 aa22.19■■□□□ 1.14
VEGFA-217ENST00000518538 XPAP23025 273 aaPredicted RBP22.19■■□□□ 1.14
VEGFA-217ENST00000518538 GRIA4P48058 902 aa22.19■■□□□ 1.14
VEGFA-217ENST00000518538 RPS21P63220 83 aaKnown RBP22.19■■□□□ 1.14
VEGFA-217ENST00000518538 ITKQ08881 620 aa22.19■■□□□ 1.14
VEGFA-217ENST00000518538 GSE1Q14687 1217 aa22.19■■□□□ 1.14
VEGFA-217ENST00000518538 TEAD4Q15561 434 aa22.19■■□□□ 1.14
VEGFA-217ENST00000518538 UGP2Q16851 508 aa22.19■■□□□ 1.14
VEGFA-217ENST00000518538 TMEM259Q4ZIN3 620 aa22.19■■□□□ 1.14
VEGFA-217ENST00000518538 LRRC73Q5JTD7 316 aa22.19■■□□□ 1.14
VEGFA-217ENST00000518538 ZSWIM9Q86XI8 627 aa22.19■■□□□ 1.14
VEGFA-217ENST00000518538 NETO1Q8TDF5 533 aa22.19■■□□□ 1.14
VEGFA-217ENST00000518538 SERAC1Q96JX3 654 aa22.19■■□□□ 1.14
VEGFA-217ENST00000518538 SLC6A18Q96N87 628 aa22.19■■□□□ 1.14
VEGFA-217ENST00000518538 IL12RB2Q99665 862 aa22.19■■□□□ 1.14
VEGFA-217ENST00000518538 SEMA3CQ99985 751 aa22.19■■□□□ 1.14
VEGFA-217ENST00000518538 FSCN3Q9NQT6 498 aa22.19■■□□□ 1.14
VEGFA-217ENST00000518538 ITM2BQ9Y287 266 aa22.19■■□□□ 1.14
VEGFA-217ENST00000518538 GON4LQ3T8J9 2241 aa22.18■■□□□ 1.14
VEGFA-217ENST00000518538 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.18■■□□□ 1.14
VEGFA-217ENST00000518538 APOC4-APOC2K7ER74 178 aa22.18■■□□□ 1.14
VEGFA-217ENST00000518538 ARHGAP33O14559 1287 aa22.18■■□□□ 1.14
VEGFA-217ENST00000518538 HTRA2O43464 458 aaPredicted RBP22.18■■□□□ 1.14
VEGFA-217ENST00000518538 APOC2P02655 101 aa22.18■■□□□ 1.14
VEGFA-217ENST00000518538 HLA-DQB2P05538 268 aa22.18■■□□□ 1.14
VEGFA-217ENST00000518538 CES1P23141 567 aa22.18■■□□□ 1.14
VEGFA-217ENST00000518538 ELP6Q0PNE2 266 aa22.18■■□□□ 1.14
VEGFA-217ENST00000518538 PRKD1Q15139 912 aaPredicted RBP22.18■■□□□ 1.14
VEGFA-217ENST00000518538 SEL1L3Q68CR1 1132 aa22.18■■□□□ 1.14
VEGFA-217ENST00000518538 NAPEPLDQ6IQ20 393 aa22.18■■□□□ 1.14
VEGFA-217ENST00000518538 TFB1MQ8WVM0 346 aaKnown RBP22.18■■□□□ 1.14
VEGFA-217ENST00000518538 SPOCK2Q92563 424 aa22.18■■□□□ 1.14
VEGFA-217ENST00000518538 HAUS1Q96CS2 278 aa22.18■■□□□ 1.14
VEGFA-217ENST00000518538 ALS2CR12Q96Q35 445 aa22.18■■□□□ 1.14
VEGFA-217ENST00000518538 HERPUD2Q9BSE4 406 aa22.18■■□□□ 1.14
VEGFA-217ENST00000518538 ZDHHC5Q9C0B5 715 aa22.18■■□□□ 1.14
VEGFA-217ENST00000518538 GGT7Q9UJ14 662 aa22.18■■□□□ 1.14
VEGFA-217ENST00000518538 ATP8A1Q9Y2Q0 1164 aa22.18■■□□□ 1.14
VEGFA-217ENST00000518538 TTLL3Q9Y4R7 772 aa22.18■■□□□ 1.14
VEGFA-217ENST00000518538 PCDH15Q96QU1 1955 aa22.18■■□□□ 1.14
VEGFA-217ENST00000518538 A0A1W2PQ67 120 aa22.17■■□□□ 1.14
VEGFA-217ENST00000518538 JCHAINP01591 159 aa22.17■■□□□ 1.14
VEGFA-217ENST00000518538 CSNK1EP49674 416 aaKnown RBP22.17■■□□□ 1.14
VEGFA-217ENST00000518538 LIMK1P53667 647 aa22.17■■□□□ 1.14
VEGFA-217ENST00000518538 POLR2LP62875 67 aaKnown RBP22.17■■□□□ 1.14
VEGFA-217ENST00000518538 DSC2Q02487 901 aa22.17■■□□□ 1.14
VEGFA-217ENST00000518538 GRIK2Q13002 908 aa22.17■■□□□ 1.14
VEGFA-217ENST00000518538 ZBTB17Q13105 803 aa22.17■■□□□ 1.14
VEGFA-217ENST00000518538 CCDC181Q5TID7 509 aa22.17■■□□□ 1.14
VEGFA-217ENST00000518538 AADACL2Q6P093 401 aa22.17■■□□□ 1.14
VEGFA-217ENST00000518538 PAF1Q8N7H5 531 aa22.17■■□□□ 1.14
VEGFA-217ENST00000518538 PCDH12Q9NPG4 1184 aa22.17■■□□□ 1.14
VEGFA-217ENST00000518538 AASDHPPTQ9NRN7 309 aa22.17■■□□□ 1.14
VEGFA-217ENST00000518538 PCDHGC4Q9Y5F7 938 aa22.17■■□□□ 1.14
VEGFA-217ENST00000518538 ZNF292O60281 2723 aa22.17■■□□□ 1.14
VEGFA-217ENST00000518538 PLXNA2O75051 1894 aa22.16■■□□□ 1.14
VEGFA-217ENST00000518538 HACD1B0YJ81 288 aa22.16■■□□□ 1.14
VEGFA-217ENST00000518538 PRAMEF26H0Y7S4 382 aa22.16■■□□□ 1.14
VEGFA-217ENST00000518538 SLC31A1O15431 190 aa22.16■■□□□ 1.14
VEGFA-217ENST00000518538 TJP3O95049 919 aa22.16■■□□□ 1.14
VEGFA-217ENST00000518538 PRLRP16471 622 aa22.16■■□□□ 1.14
VEGFA-217ENST00000518538 TRAF2Q12933 501 aa22.16■■□□□ 1.14
VEGFA-217ENST00000518538 ZNF211Q13398 564 aaPredicted RBP22.16■■□□□ 1.14
VEGFA-217ENST00000518538 NOMO1Q15155 1222 aa22.16■■□□□ 1.14
VEGFA-217ENST00000518538 ERAP2Q6P179 960 aa22.16■■□□□ 1.14
VEGFA-217ENST00000518538 B4GALNT4Q76KP1 1039 aa22.16■■□□□ 1.14
VEGFA-217ENST00000518538 ADAT2Q7Z6V5 191 aaKnown RBP22.16■■□□□ 1.14
VEGFA-217ENST00000518538 ZC3H18Q86VM9 953 aaKnown RBP22.16■■□□□ 1.14
VEGFA-217ENST00000518538 CNTD1Q8N815 330 aa22.16■■□□□ 1.14
VEGFA-217ENST00000518538 ARRDC2Q8TBH0 407 aa22.16■■□□□ 1.14
VEGFA-217ENST00000518538 KLK6Q92876 244 aa22.16■■□□□ 1.14
VEGFA-217ENST00000518538 KCNF1Q9H3M0 494 aa22.16■■□□□ 1.14
VEGFA-217ENST00000518538 SEPT10Q9P0V9 454 aa22.16■■□□□ 1.14
VEGFA-217ENST00000518538 A0A1B0GVT2 93 aa22.15■■□□□ 1.14
VEGFA-217ENST00000518538 CDX4O14627 284 aaPredicted RBP22.15■■□□□ 1.14
VEGFA-217ENST00000518538 RIOK3O14730 519 aaKnown RBP22.15■■□□□ 1.14
VEGFA-217ENST00000518538 WNT9AO14904 365 aa22.15■■□□□ 1.14
VEGFA-217ENST00000518538 VILLO15195 856 aa22.15■■□□□ 1.14
VEGFA-217ENST00000518538 MTSS1O43312 755 aa22.15■■□□□ 1.14
VEGFA-217ENST00000518538 ITIH2P19823 946 aa22.15■■□□□ 1.14
VEGFA-217ENST00000518538 SDHBP21912 280 aa22.15■■□□□ 1.14
VEGFA-217ENST00000518538 HNRNPA2B1P22626 353 aaKnown RBP22.15■■□□□ 1.14
VEGFA-217ENST00000518538 CD38P28907 300 aa22.15■■□□□ 1.14
VEGFA-217ENST00000518538 ATXN3P54252 364 aaPredicted RBP22.15■■□□□ 1.14
VEGFA-217ENST00000518538 XRCC4Q13426 336 aa22.15■■□□□ 1.14
VEGFA-217ENST00000518538 FGL2Q14314 439 aa22.15■■□□□ 1.14
VEGFA-217ENST00000518538 TMEM52BQ4KMG9 183 aa22.15■■□□□ 1.14
VEGFA-217ENST00000518538 SLC45A4Q5BKX6 768 aa22.15■■□□□ 1.14
VEGFA-217ENST00000518538 STPG1Q5TH74 334 aa22.15■■□□□ 1.14
VEGFA-217ENST00000518538 LAYNQ6UX15 382 aa22.15■■□□□ 1.14
VEGFA-217ENST00000518538 TMEM145Q8NBT3 493 aa22.15■■□□□ 1.14
VEGFA-217ENST00000518538 TRIM58Q8NG06 486 aa22.15■■□□□ 1.14
VEGFA-217ENST00000518538 CXorf40AQ8TE69 158 aa22.15■■□□□ 1.14
VEGFA-217ENST00000518538 PDCD6IPQ8WUM4 868 aaKnown RBP22.15■■□□□ 1.14
VEGFA-217ENST00000518538 ASB12Q8WXK4 309 aa22.15■■□□□ 1.14
VEGFA-217ENST00000518538 SKA1Q96BD8 255 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms