RNA–Protein interactions for RNA: ENST00000518043.5

CPS1-210, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 2

Gene CPS1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-210ENST00000518043 ZNF135P52742 658 aaPredicted RBP7.03□□□□□ -1.28
CPS1-210ENST00000518043 VSNL1P62760 191 aa7.03□□□□□ -1.28
CPS1-210ENST00000518043 RPS24P62847 133 aaKnown RBP7.03□□□□□ -1.28
CPS1-210ENST00000518043 COG7P83436 770 aa7.03□□□□□ -1.28
CPS1-210ENST00000518043 PTK6Q13882 451 aa7.03□□□□□ -1.28
CPS1-210ENST00000518043 CLUL1Q15846 466 aa7.03□□□□□ -1.28
CPS1-210ENST00000518043 ZFYVE27Q5T4F4 411 aa7.03□□□□□ -1.28
CPS1-210ENST00000518043 DUPD1Q68J44 220 aa7.03□□□□□ -1.28
CPS1-210ENST00000518043 CCDC137Q6PK04 289 aaKnown RBP7.03□□□□□ -1.28
CPS1-210ENST00000518043 ZDHHC24Q6UX98 284 aa7.03□□□□□ -1.28
CPS1-210ENST00000518043 ARHGAP36Q6ZRI8 547 aa7.03□□□□□ -1.28
CPS1-210ENST00000518043 HTR3DQ70Z44 454 aa7.03□□□□□ -1.28
CPS1-210ENST00000518043 DENND1CQ8IV53 801 aa7.03□□□□□ -1.28
CPS1-210ENST00000518043 UNC45BQ8IWX7 931 aa7.03□□□□□ -1.28
CPS1-210ENST00000518043 BBS7Q8IWZ6 715 aa7.03□□□□□ -1.28
CPS1-210ENST00000518043 CMTM8Q8IZV2 173 aa7.03□□□□□ -1.28
CPS1-210ENST00000518043 UMODL1-AS1Q8N2C9 162 aa7.03□□□□□ -1.28
CPS1-210ENST00000518043 ELMOD1Q8N336 334 aa7.03□□□□□ -1.28
CPS1-210ENST00000518043 ALLCQ8N6M5 410 aa7.03□□□□□ -1.28
CPS1-210ENST00000518043 ATP6V0D2Q8N8Y2 350 aa7.03□□□□□ -1.28
CPS1-210ENST00000518043 SH3RF2Q8TEC5 729 aa7.03□□□□□ -1.28
CPS1-210ENST00000518043 DEPDC1BQ8WUY9 529 aa7.03□□□□□ -1.28
CPS1-210ENST00000518043 MAIP1Q8WWC4 291 aa7.03□□□□□ -1.28
CPS1-210ENST00000518043 CASKIN2Q8WXE0 1202 aa7.03□□□□□ -1.28
CPS1-210ENST00000518043 LMLNQ96KR4 655 aa7.03□□□□□ -1.28
CPS1-210ENST00000518043 RHOXF2Q9BQY4 288 aa7.03□□□□□ -1.28
CPS1-210ENST00000518043 SIK2Q9H0K1 926 aa7.03□□□□□ -1.28
CPS1-210ENST00000518043 EPN3Q9H201 632 aa7.03□□□□□ -1.28
CPS1-210ENST00000518043 NEUROG2Q9H2A3 272 aa7.03□□□□□ -1.28
CPS1-210ENST00000518043 CARS2Q9HA77 564 aaKnown RBP7.03□□□□□ -1.28
CPS1-210ENST00000518043 PRDM16Q9HAZ2 1276 aa7.03□□□□□ -1.28
CPS1-210ENST00000518043 GDF3Q9NR23 364 aa7.03□□□□□ -1.28
CPS1-210ENST00000518043 GRHL1Q9NZI5 618 aa7.03□□□□□ -1.28
CPS1-210ENST00000518043 RAB21Q9UL25 225 aa7.03□□□□□ -1.28
CPS1-210ENST00000518043 VANGL2Q9ULK5 521 aa7.03□□□□□ -1.28
CPS1-210ENST00000518043 DRG1Q9Y295 367 aaKnown RBP7.03□□□□□ -1.28
CPS1-210ENST00000518043 MIA3Q5JRA6 1907 aa7.03□□□□□ -1.28
CPS1-210ENST00000518043 CLUHO75153 1309 aa7.02□□□□□ -1.28
CPS1-210ENST00000518043 MYLKQ15746 1914 aa7.02□□□□□ -1.29
CPS1-210ENST00000518043 TARSL2A2RTX5 802 aaKnown RBP7.02□□□□□ -1.29
CPS1-210ENST00000518043 H0Y8X5 98 aa7.02□□□□□ -1.29
CPS1-210ENST00000518043 TRDMT1O14717 391 aaKnown RBP7.02□□□□□ -1.29
CPS1-210ENST00000518043 HEXIM1O94992 359 aaKnown RBP7.02□□□□□ -1.29
CPS1-210ENST00000518043 GSNP06396 782 aa7.02□□□□□ -1.29
CPS1-210ENST00000518043 CKMP06732 381 aa7.02□□□□□ -1.29
CPS1-210ENST00000518043 ZSCAN5DPP0CG00 497 aa7.02□□□□□ -1.29
CPS1-210ENST00000518043 SRGAP2BP0DMP2 458 aa7.02□□□□□ -1.29
CPS1-210ENST00000518043 RBP3P10745 1247 aa7.02□□□□□ -1.29
CPS1-210ENST00000518043 H2AFXP16104 143 aaPredicted RBP7.02□□□□□ -1.29
CPS1-210ENST00000518043 HOXD9P28356 352 aaPredicted RBP7.02□□□□□ -1.29
CPS1-210ENST00000518043 RPL21P46778 160 aaKnown RBP7.02□□□□□ -1.29
CPS1-210ENST00000518043 PCBP3P57721 371 aaKnown RBP7.02□□□□□ -1.29
CPS1-210ENST00000518043 EIF3EP60228 445 aaKnown RBP7.02□□□□□ -1.29
CPS1-210ENST00000518043 DR1Q01658 176 aa7.02□□□□□ -1.29
CPS1-210ENST00000518043 PPIDQ08752 370 aaKnown RBP7.02□□□□□ -1.29
CPS1-210ENST00000518043 WASHC5Q12768 1159 aa7.02□□□□□ -1.29
CPS1-210ENST00000518043 XRCC4Q13426 336 aa7.02□□□□□ -1.29
CPS1-210ENST00000518043 BYSLQ13895 437 aaKnown RBP7.02□□□□□ -1.29
CPS1-210ENST00000518043 DHX34Q14147 1143 aaKnown RBP7.02□□□□□ -1.29
CPS1-210ENST00000518043 CBX2Q14781 532 aaPredicted RBP7.02□□□□□ -1.29
CPS1-210ENST00000518043 GLE1Q53GS7 698 aaKnown RBP7.02□□□□□ -1.29
CPS1-210ENST00000518043 SLC45A4Q5BKX6 768 aa7.02□□□□□ -1.29
CPS1-210ENST00000518043 FAM78AQ5JUQ0 283 aa7.02□□□□□ -1.29
CPS1-210ENST00000518043 ADGRF1Q5T601 910 aa7.02□□□□□ -1.29
CPS1-210ENST00000518043 CXorf57Q6NSI4 855 aaKnown RBP7.02□□□□□ -1.29
CPS1-210ENST00000518043 C8orf74Q6P047 294 aa7.02□□□□□ -1.29
CPS1-210ENST00000518043 CRTC3Q6UUV7 619 aa7.02□□□□□ -1.29
CPS1-210ENST00000518043 TMCO3Q6UWJ1 677 aa7.02□□□□□ -1.29
CPS1-210ENST00000518043 TFAP2DQ7Z6R9 452 aa7.02□□□□□ -1.29
CPS1-210ENST00000518043 ZC3H18Q86VM9 953 aaKnown RBP7.02□□□□□ -1.29
CPS1-210ENST00000518043 CHSY1Q86X52 802 aa7.02□□□□□ -1.29
CPS1-210ENST00000518043 DDX42Q86XP3 938 aaKnown RBP eCLIP7.02□□□□□ -1.29
CPS1-210ENST00000518043 GSPT2Q8IYD1 628 aaKnown RBP7.02□□□□□ -1.29
CPS1-210ENST00000518043 LGI2Q8N0V4 545 aa7.02□□□□□ -1.29
CPS1-210ENST00000518043 CFAP52Q8N1V2 620 aa7.02□□□□□ -1.29
CPS1-210ENST00000518043 CPXM2Q8N436 756 aa7.02□□□□□ -1.29
CPS1-210ENST00000518043 ARHGEF39Q8N4T4 335 aa7.02□□□□□ -1.29
CPS1-210ENST00000518043 ST13P5Q8NFI4 369 aaPredicted RBP7.02□□□□□ -1.29
CPS1-210ENST00000518043 WFDC5Q8TCV5 224 aa7.02□□□□□ -1.29
CPS1-210ENST00000518043 PPP1R14AQ96A00 147 aa7.02□□□□□ -1.29
CPS1-210ENST00000518043 ASIC4Q96FT7 647 aa7.02□□□□□ -1.29
CPS1-210ENST00000518043 RCC1LQ96I51 464 aaKnown RBP7.02□□□□□ -1.29
CPS1-210ENST00000518043 CELF6Q96J87 481 aaKnown RBP7.02□□□□□ -1.29
CPS1-210ENST00000518043 DEPDC7Q96QD5 511 aa7.02□□□□□ -1.29
CPS1-210ENST00000518043 GCNAQ96QF7 691 aa7.02□□□□□ -1.29
CPS1-210ENST00000518043 SRPK1Q96SB4 655 aaKnown RBP7.02□□□□□ -1.29
CPS1-210ENST00000518043 LGMNQ99538 433 aa7.02□□□□□ -1.29
CPS1-210ENST00000518043 GORASP1Q9BQQ3 440 aa7.02□□□□□ -1.29
CPS1-210ENST00000518043 TMEM121Q9BTD3 319 aa7.02□□□□□ -1.29
CPS1-210ENST00000518043 PARD6BQ9BYG5 372 aa7.02□□□□□ -1.29
CPS1-210ENST00000518043 FRMD8P1Q9BZ68 369 aaPredicted RBP7.02□□□□□ -1.29
CPS1-210ENST00000518043 ZYG11BQ9C0D3 744 aa7.02□□□□□ -1.29
CPS1-210ENST00000518043 SLC39A8Q9C0K1 460 aa7.02□□□□□ -1.29
CPS1-210ENST00000518043 NACA2Q9H009 215 aa7.02□□□□□ -1.29
CPS1-210ENST00000518043 ADAM7Q9H2U9 754 aa7.02□□□□□ -1.29
CPS1-210ENST00000518043 ZFP64Q9NPA5 681 aa7.02□□□□□ -1.29
CPS1-210ENST00000518043 ZDHHC18Q9NUE0 388 aa7.02□□□□□ -1.29
CPS1-210ENST00000518043 TMEM248Q9NWD8 314 aa7.02□□□□□ -1.29
CPS1-210ENST00000518043 CGGBP1Q9UFW8 167 aaPredicted RBP7.02□□□□□ -1.29
CPS1-210ENST00000518043 DPP7Q9UHL4 492 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms