RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 PELOQ9BRX2 385 aaKnown RBP4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 TUBGCP2Q9BSJ2 902 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 FSD1Q9BTV5 496 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 SGPP1Q9BX95 441 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 C1QTNF7Q9BXJ2 289 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 HDAC8Q9BY41 377 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 GCOM2Q9BZD3 368 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 WWP1Q9H0M0 922 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 NAPBQ9H115 298 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 MMRN2Q9H8L6 949 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 JMJD4Q9H9V9 463 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 CXorf21Q9HAI6 301 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 MLXIPQ9HAP2 919 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 MAGEF1Q9HAY2 307 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 NTN4Q9HB63 628 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 MRM3Q9HC36 420 aaKnown RBP4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 CAPN10Q9HC96 672 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 PARD6AQ9NPB6 346 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 PCDH12Q9NPG4 1184 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 ZDHHC18Q9NUE0 388 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 GFOD1Q9NXC2 390 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 KCND2Q9NZV8 630 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 WHRNQ9P202 907 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 TXNDC16Q9P2K2 825 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 PI4KBQ9UBF8 816 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 ARMCX3Q9UH62 379 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 PCYOX1Q9UHG3 505 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 TRMT6Q9UJA5 497 aaKnown RBP4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 ZNF229Q9UJW7 825 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 AMFRQ9UKV5 643 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 BAG5Q9UL15 447 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 PSME2Q9UL46 239 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 DENND2AQ9ULE3 1009 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 EDARQ9UNE0 448 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 SIK3Q9Y2K2 1263 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 GRIP1Q9Y3R0 1128 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 PPP2R3BQ9Y5P8 575 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 AP4B1Q9Y6B7 739 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 DUSP10Q9Y6W6 482 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 ZNF804BA4D1E1 1349 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 CAMSAP1Q5T5Y3 1602 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 CYP3A7-CYP3A51PA0A087WV96 503 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 A0A0G2JLL6 359 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 ARHGAP42A6NI28 874 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 ARGFXA6NJG6 315 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 ZNF98A6NK75 572 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 PDZK1P1A8MUH7 402 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 C2orf74A8MZ97 194 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 H3BMM5 538 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 EEF2KO00418 725 aaKnown RBP4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 ELL2O00472 640 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 DNALI1O14645 258 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 TNPO2O14787 897 aaKnown RBP4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 KIAA0391O15091 583 aaKnown RBP4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 AKAP10O43572 662 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 CHMP2AO43633 222 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 BUB1O43683 1085 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 GMDSO60547 372 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 FKTNO75072 461 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 NIPSNAP2O75323 286 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 PDE9AO76083 593 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 MFN2O95140 757 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 CCNDBP1O95273 360 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 PRAMEF1O95521 474 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 TTC4O95801 387 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 CAPNS1P04632 268 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 IL6P05231 212 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 TFPTP0C1Z6 253 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 HPGDP15428 266 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 PTPN1P18031 435 aaKnown RBP4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 KRT15P19012 456 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 CYP3A7P24462 503 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 CCNE1P24864 410 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 RPL10P27635 214 aaKnown RBP4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 ERP29P30040 261 aaKnown RBP4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 UGT2B10P36537 528 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 IL12RB1P42701 662 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 LEPRP48357 1165 aaKnown RBP4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 SOX9P48436 509 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 HCAR3P49019 387 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 NPY2RP49146 381 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 SERPINH1P50454 418 aaKnown RBP4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 PEX3P56589 373 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 HSD17B7P56937 341 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 BPIFB3P59826 476 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 DCDC1P59894 354 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 UBE3AQ05086 875 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 BST2Q10589 180 aaKnown RBP4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 DUSP4Q13115 394 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 MAPK7Q13164 816 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 TFDP1Q14186 410 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 MORF4L2Q15014 288 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 NCF4Q15080 339 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 ANGPT1Q15389 498 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 DLGAP5Q15398 846 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 DLG2Q15700 870 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 GPR162Q16538 588 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 SLC18A3Q16572 532 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 UGP2Q16851 508 aa4.85□□□□□ -1.63
HMGB1P19-201ENST00000517578 FAM47CQ5HY64 1035 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms