RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 STXBP5Q5T5C0 1151 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 PRR9Q5T870 116 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SLC25A34Q6PIV7 304 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 KLHL24Q6TFL4 600 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 GFRALQ6UXV0 394 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 USP37Q86T82 979 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 DDX53Q86TM3 631 aaKnown RBP-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 IGFN1Q86VF2 1251 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 AMIGO1Q86WK6 493 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TMEM219Q86XT9 240 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 KMT5CQ86Y97 462 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 LRRC47Q8N1G4 583 aaKnown RBP-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ZNF615Q8N8J6 731 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 FAM46DQ8NEK8 389 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 IFI44Q8TCB0 444 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 STT3BQ8TCJ2 826 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 KCNG4Q8TDN1 519 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TSPEARQ8WU66 669 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 FRAT1Q92837 279 aaPredicted RBP-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ARHGEF26Q96DR7 871 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ERLEC1Q96DZ1 483 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ARSGQ96EG1 525 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 PELI1Q96FA3 418 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TMX3Q96JJ7 454 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ZNF333Q96JL9 665 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SLC45A3Q96JT2 553 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MAGEB10Q96LZ2 347 aaPredicted RBP-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TEKT5Q96M29 485 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 C3orf30Q96M34 536 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ACAP3Q96P50 834 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MOGAT1Q96PD6 335 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 STACQ99469 402 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ZNF2Q9BSG1 426 aaPredicted RBP-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ZNF577Q9BSK1 485 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MMTAG2Q9BU76 263 aaKnown RBP-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ADI1Q9BV57 179 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TRIM2Q9C040 744 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 BICC1Q9H694 974 aaKnown RBP-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SLC52A2Q9HAB3 445 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MRS2Q9HD23 443 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 CABP5Q9NP86 173 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 DMRT3Q9NQL9 472 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 VPS45Q9NRW7 570 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 OXSMQ9NWU1 459 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SIDT1Q9NXL6 827 aaKnown RBP-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MAP3K20Q9NYL2 800 aaKnown RBP-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ERAP1Q9NZ08 941 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ACTR10Q9NZ32 417 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 FLRT3Q9NZU0 649 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 B4GALT6Q9UBX8 382 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 DPP7Q9UHL4 492 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 PHF11Q9UIL8 331 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ACAD8Q9UKU7 415 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 KCNS2Q9ULS6 477 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 KCNJ14Q9UNX9 436 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 PSG11Q9UQ72 335 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ZNF510Q9Y2H8 683 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 KLHL20Q9Y2M5 609 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MRPS17Q9Y2R5 130 aaKnown RBP-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 CUL9Q8IWT3 2517 aa-0.72□□□□□ -2.53
RNU6-1238P-201ENST00000517215 KIAA1210Q9ULL0 1709 aa-0.72□□□□□ -2.53
RNU6-1238P-201ENST00000517215 TPRP12270 2363 aaKnown RBP-0.72□□□□□ -2.53
RNU6-1238P-201ENST00000517215 MED13Q9UHV7 2174 aa-0.73□□□□□ -2.53
RNU6-1238P-201ENST00000517215 PTPRZ1P23471 2315 aaPredicted RBP-0.73□□□□□ -2.53
RNU6-1238P-201ENST00000517215 LTBP4Q8N2S1 1624 aa-0.73□□□□□ -2.53
RNU6-1238P-201ENST00000517215 IGHV4-4A0A075B6R2 117 aa-0.73□□□□□ -2.53
RNU6-1238P-201ENST00000517215 TRBV23-1A0A0A0MS06 115 aa-0.73□□□□□ -2.53
RNU6-1238P-201ENST00000517215 CARNS1A5YM72 827 aa-0.73□□□□□ -2.53
RNU6-1238P-201ENST00000517215 ASB14A6NK59 587 aa-0.73□□□□□ -2.53
RNU6-1238P-201ENST00000517215 KDM4EB2RXH2 506 aaPredicted RBP-0.73□□□□□ -2.53
RNU6-1238P-201ENST00000517215 FAM227AF5H4B4 570 aa-0.73□□□□□ -2.53
RNU6-1238P-201ENST00000517215 TAF4O00268 1085 aa-0.73□□□□□ -2.53
RNU6-1238P-201ENST00000517215 OVOL1O14753 267 aa-0.73□□□□□ -2.53
RNU6-1238P-201ENST00000517215 TIMM23O14925 209 aa-0.73□□□□□ -2.53
RNU6-1238P-201ENST00000517215 PHGDHO43175 533 aaKnown RBP-0.73□□□□□ -2.53
RNU6-1238P-201ENST00000517215 LRCH4O75427 683 aa-0.73□□□□□ -2.53
RNU6-1238P-201ENST00000517215 STAM2O75886 525 aa-0.73□□□□□ -2.53
RNU6-1238P-201ENST00000517215 FAM155BO75949 473 aa-0.73□□□□□ -2.53
RNU6-1238P-201ENST00000517215 TOXO94900 526 aa-0.73□□□□□ -2.53
RNU6-1238P-201ENST00000517215 TSHBP01222 138 aa-0.73□□□□□ -2.53
RNU6-1238P-201ENST00000517215 RAF1P04049 648 aa-0.73□□□□□ -2.53
RNU6-1238P-201ENST00000517215 SLC3A2P08195 630 aaKnown RBP-0.73□□□□□ -2.53
RNU6-1238P-201ENST00000517215 GIG44P09565 113 aaPredicted RBP-0.73□□□□□ -2.53
RNU6-1238P-201ENST00000517215 ZNF286BP0CG31 522 aa-0.73□□□□□ -2.53
RNU6-1238P-201ENST00000517215 TMIGD3P0DMS9 266 aaPredicted RBP-0.73□□□□□ -2.53
RNU6-1238P-201ENST00000517215 ITGA3P26006 1051 aa-0.73□□□□□ -2.53
RNU6-1238P-201ENST00000517215 DUSP1P28562 367 aa-0.73□□□□□ -2.53
RNU6-1238P-201ENST00000517215 EPHA3P29320 983 aa-0.73□□□□□ -2.53
RNU6-1238P-201ENST00000517215 IGFALSP35858 605 aa-0.73□□□□□ -2.53
RNU6-1238P-201ENST00000517215 UBA7P41226 1012 aa-0.73□□□□□ -2.53
RNU6-1238P-201ENST00000517215 VIPR2P41587 438 aa-0.73□□□□□ -2.53
RNU6-1238P-201ENST00000517215 LHX1P48742 406 aa-0.73□□□□□ -2.53
RNU6-1238P-201ENST00000517215 LMAN1P49257 510 aa-0.73□□□□□ -2.53
RNU6-1238P-201ENST00000517215 DGKEP52429 567 aa-0.73□□□□□ -2.53
RNU6-1238P-201ENST00000517215 CDH12P55289 794 aa-0.73□□□□□ -2.53
RNU6-1238P-201ENST00000517215 TIRAPP58753 221 aa-0.73□□□□□ -2.53
RNU6-1238P-201ENST00000517215 KCNJ10P78508 379 aa-0.73□□□□□ -2.53
RNU6-1238P-201ENST00000517215 CDK17Q00537 523 aa-0.73□□□□□ -2.53
RNU6-1238P-201ENST00000517215 TARDBPQ13148 414 aaKnown RBP eCLIP-0.73□□□□□ -2.53
RNU6-1238P-201ENST00000517215 DRP2Q13474 957 aa-0.73□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms